43 research outputs found

    Using a novel biologging approach to assess how different handling practices influence the post-release behaviour of Northern Pike across a wide range of body sizes

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    There is a growing body of research focused on how angled fish respond to catch-and-release (C&R). However, most of those studies do not span a wide range of body sizes for the targeted species. Physical injury and physiological responses to C&R can be size-dependent, and methods used for landing fish of different sizes vary. As such, studying the response to C&R across a range of fish sizes may help inform best practices that improve outcomes for released fish. Northern Pike (Esox lucius) widely ranges in body size. Anglers may land them by hand, cradle, or net, and they are often released voluntarily or to comply with regulations. We angled 25 Northern Pike (total length 620–1030 mm) from one population and recorded fight, handling, and unhooking times across landing methods (i.e., hand, cradle, net). Prior to release, a pop-off biologging package was temporarily affixed to each fish to monitor locomotor activity, depth, and water temperature during a 12-h period post-release to understand how the interaction of landing method and body size influenced post-release behaviour and short-term fate. Fight and handling time increased with increasing body size. Northern Pike landed with a cradle or net had shorter fight times but longer handling times, compared to fish landed by hand. Post-release locomotor activity was greater for larger fish and those landed with a net. Fish 775mm landed by hand had reduced locomotor activity compared to fish landed with a net. There was no post-release mortality observed. Collectively, anglers should use a net for Northern Pike >775 mm to avoid long fight times and reduce post-release exhaustion, but also attempt to reduce the extent of handling associated with fish landed by net

    Variant Histone H2A.Z Is Globally Localized to the Promoters of Inactive Yeast Genes and Regulates Nucleosome Positioning

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    H2A.Z is an evolutionary conserved histone variant involved in transcriptional regulation, antisilencing, silencing, and genome stability. The mechanism(s) by which H2A.Z regulates these various biological functions remains poorly defined, in part due to the lack of knowledge regarding its physical location along chromosomes and the bearing it has in regulating chromatin structure. Here we mapped H2A.Z across the yeast genome at an approximately 300-bp resolution, using chromatin immunoprecipitation combined with tiling microarrays. We have identified 4,862 small regions—typically one or two nucleosomes wide—decorated with H2A.Z. Those “Z loci” are predominantly found within specific nucleosomes in the promoter of inactive genes all across the genome. Furthermore, we have shown that H2A.Z can regulate nucleosome positioning at the GAL1 promoter. Within HZAD domains, the regions where H2A.Z shows an antisilencing function, H2A.Z is localized in a wider pattern, suggesting that the variant histone regulates a silencing and transcriptional activation via different mechanisms. Our data suggest that the incorporation of H2A.Z into specific promoter-bound nucleosomes configures chromatin structure to poise genes for transcriptional activation. The relevance of these findings to higher eukaryotes is discussed

    The Euchromatic and Heterochromatic Landscapes Are Shaped by Antagonizing Effects of Transcription on H2A.Z Deposition

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    A role for variant histone H2A.Z in gene expression is now well established but little is known about the mechanisms by which it operates. Using a combination of ChIP–chip, knockdown and expression profiling experiments, we show that upon gene induction, human H2A.Z associates with gene promoters and helps in recruiting the transcriptional machinery. Surprisingly, we also found that H2A.Z is randomly incorporated in the genome at low levels and that active transcription antagonizes this incorporation in transcribed regions. After cessation of transcription, random H2A.Z quickly reappears on genes, demonstrating that this incorporation utilizes an active mechanism. Within facultative heterochromatin, we observe a hyper accumulation of the variant histone, which might be due to the lack of transcription in these regions. These results show how chromatin structure and transcription can antagonize each other, therefore shaping chromatin and controlling gene expression

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