185 research outputs found

    PENYELESAIAN SISTEM PEMBENTUKAN SEL PADA HYDRA MENGGUNAKAN METODE BEDA HINGGA SKEMA EKSPLISIT

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    Mathematical models that describes the pattern of cell formation in hydra are expressed in a system of equations known as the Meinhardt model. This model is a continuous model in the form of diffusion equations. Thus, one of the studies which can be applied to Meinhardt equation is discretization. The finite difference model is a numerical method that can describe the discrete form of a continuous differential form. The method used in this study is finite different methods implementing explicit scheme.  The advantage of the explicit scheme is easier to use for solving non-linear partial differential equations. This method used finite forward difference for derivatives of ð‘¡ and finite centre difference for derivatives of Ă°â€˜Â„ at theactivator Ă°â€˜Ćœ(Ă°â€˜Â„, ð‘¡) and inhibitor ð‘(Ă°â€˜Â„, ð‘¡). The Steps conducted by analyzing Meinhardt equation andcontinued with discretization such that earn the solution of system cell formation in hydra. According to the research its found that the activator cell population graphic have cell growth disposed ascend by the unit time, be different with the inhibitor cell population disposed descend of cell growth by the unit time

    Cerium-Based Spontaneous Coating Process for Corrosion Protection of Aluminum Alloys

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    A cerium-based coating for corrosion resistance is applied by exposing a cleaned aluminum-based component to a corrosion-inhibiting cerium solution containing cerium ions in the presence of an oxidizing agent. The coating deposits spontaneously without an external source of electrons

    The effect of culture preservation techniques on patulin and citrinin production by Penicillium expansum Link

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    Aims: To study the influence of culture preservation methods and culture conditions on the production of the mycotoxins patulin and citrinin by Penicillium expansum. Methods and results: Ten strains of Penicillium expansum were preserved using subculture and maintenance at 4 ÂșC, mineral oil, drying on silica gel and freeze-drying. Patulin and citrinin production was assessed on yeast extract sucrose agar (YES) and grape juice agar (GJ), using TLC before and after 0.5, 2–3, 6 and 12 months preservation. Citrinin was detected in all cultures for all preservation techniques on YES. The patulin profiles obtained differed with strain and culture media used. Conclusions: Citrinin production seems to be a stable character for the tested strains. There is a tendency for patulin detection with time apparently more consistent for silica gel storage and freeze-drying, especially when the strains are grown on GJ. Significance and Impact of the Study: Variability in the profiles of the mycotoxins tested seems to be more strain-specific than dependent on the preservation technique used

    A study protocol to investigate the relationship between dietary fibre intake and fermentation, colon cell turnover, global protein acetylation and early carcinogenesis: the FACT study

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    Background: A number of studies, notably EPIC, have shown a descrease in colorectal cancer risk associated with increased fibre consumption. Whilst the underlying mechanisms are likely to be multifactorial, production of the short-chain fatty-acid butyrate fro butyratye is frequently cited as a major potential contributor to the effect. Butyrate inhibits histone deacetylases, which work on a wide range of proteins over and above histones. We therefore hypothesized that alterations in the acetylated proteome may be associated with a cancer risk phenotype in the colorectal mucosa, and that such alterations are candidate biomarkers for effectiveness of fibre interventions in cancer prevention. Methods an design: There are two principal arms to this study: (i) a cross-sectional study (FACT OBS) of 90 subjects recruited from gastroenterology clinics and; (ii) an intervention trial in 40 subjects with an 8 week high fibre intervention. In both studies the principal goal is to investigate a link between fibre intake, SCFA production and global protein acetylation. The primary measure is level of faecal butyrate, which it is hoped will be elevated by moving subjects to a high fibre diet. Fibre intakes will be estimated in the cross-sectional group using the EPIC Food Frequency Questionnaire. Subsidiary measures of the effect of butyrate on colon mucosal function and precancerous phenotype will include measures of apoptosis, apoptotic regulators cell cycle and cell division. Discussion: This study will provide a new level of mechanistic data on alterations in the functional proteome in response to the colon microenvironment which may underwrite the observed cancer preventive effect of fibre. The study may yield novel candidate biomarkers of fibre fermentation and colon mucosal function

    Matching NLO parton shower matrix element with exact phase space: case of W -> l nu (gamma) and gamma^* -> pi^+pi^-(gamma)

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    The PHOTOS Monte Carlo is often used for simulation of QED effects in decay of intermediate particles and resonances. Momenta are generated in such a way that samples of events cover the whole bremsstrahlung phase space. With the help of selection cuts, experimental acceptance can be then taken into account. The program is based on an exact multiphoton phase space. Crude matrix element is obtained by iteration of a universal multidimensional kernel. It ensures exact distribution in the soft photon region. Algorithm is compatible with exclusive exponentiation. To evaluate the program's precision, it is necessary to control the kernel with the help of perturbative results. If available, kernel is constructed from the exact first order matrix element. This ensures that all terms necessary for non-leading logarithms are taken into account. In the present paper we will focus on the W -> l nu and gamma^* -> pi^+ pi^- decays. The Born level cross sections for both processes approach zero in some points of the phase space. A process dependent compensating weight is constructed to incorporate the exact matrix element, but is recommended for use in tests only. In the hard photon region, where scalar QED is not expected to be reliable, the compensating weight for gamma^* decay can be large. With respect to the total rate, the effect remains at the permille level. It is nonetheless of interest. The terms leading to the effect are analogous to some terms appearing in QCD. The present paper can be understood either as a contribution to discussion on how to match two collinear emission chains resulting from charged sources in a way compatible with the exact and complete phase space, exclusive exponentiation and the first order matrix element of QED (scalar QED), or as the practical study of predictions for accelerator experiments.Comment: 24 page

    Estudo etnobotĂąnico junto aos ervatĂĄrios da ĂĄrea central de Pelotas-RS.

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    Solvation free energy profile of the SCN- ion across the water-1,2-dichloroethane liquid/liquid interface. A computer simulation study

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    The solvation free energy profile of a single SCN- ion is calculated across the water-1,2-dichloroethane liquid/liquid interface at 298 K by the constraint force method. The obtained results show that the free energy cost of transferring the ion from the aqueous to the organic phase is about 70 kJ/mol, The free energy profile shows a small but clear well at the aqueous side of the interface, in the subsurface region of the water phase, indicating the ability of the SCN- ion to be adsorbed in the close vicinity of the interface. Upon entrance of the SCN- ion to the organic phase a coextraction of the water molecules of its first hydration shell occurs. Accordingly, when it is located at the boundary of the two phases the SCN- ion prefers orientations in which its bulky S atom is located at the aqueous side, and the small N atom, together with its first hydration shell, at the organic side of the interface

    Initial characteristics of RbcX proteins from Arabidopsis thaliana

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    Form I of Rubisco (ribulose-1,5-bisphosphate carboxylase/oxygenase) is composed of eight large (RbcL) and eight small (RbcS) subunits. Assembly of these subunits into a functional holoenzyme requires the assistance of additional assembly factors. One such factor is RbcX, which has been demonstrated to act as a chaperone in the assembly of most cyanobacterial Rubisco complexes expressed in heterologous system established in Escherichia coli cells. Analysis of Arabidopsis thaliana genomic sequence revealed the presence of two genes encoding putative homologues of cyanobacterial RbcX protein: AtRbcX1 (At4G04330) and AtRbcX2 (At5G19855). In general, both RbcX homologues seem to have the same function which is chaperone activity during Rubisco biogenesis. However, detailed analysis revealed slight differences between them. AtRbcX2 is localized in the stromal fraction of chloroplasts whereas AtRbcX1 was found in the insoluble fraction corresponding with thylakoid membranes. Search for putative “partners” using mass spectrometry analysis suggested that apart from binding to RbcL, AtRbcX1 may also interact with ÎČ subunit of chloroplast ATP synthase. Quantitative RT-PCR analysis of AtRbcX1 and AtRbcX2 expression under various stress conditions indicated that AtRbcX2 is transcribed at a relatively stable level, while the transcription level of AtRbcX1 varies significantly. In addition, we present the attempts to elucidate the secondary structure of AtRbcX proteins using CD spectroscopy. Presented results are the first known approach to elucidate the role of RbcX proteins in Rubisco assembly in higher plants

    Evaluation of chloroform/methanol extraction to facilitate the study of membrane proteins of non-model plants

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    Membrane proteins are of great interest to plant physiologists because of their important function in many physiological processes. However, their study is hampered by their low abundance and poor solubility in aqueous buffers. Proteomics studies of non-model plants are generally restricted to gel-based methods. Unfortunately, all gel-based techniques for membrane proteomics lack resolving power. Therefore, a very stringent enrichment method is needed before protein separation. In this study, protein extraction in a mixture of chloroform and methanol in combination with gel electrophoresis is evaluated as a method to study membrane proteins in non-model plants. Benefits as well as disadvantages of the method are discussed. To demonstrate the pitfalls of working with non-model plants and to give a proof of principle, the method was first applied to whole leaves of the model plant Arabidopsis. Subsequently, a comparison with proteins extracted from leaves of the non-model plant, banana, was made. To estimate the tissue and organelle specificity of the method, it was also applied on banana meristems. Abundant membrane or lipid-associated proteins could be identified in both tissues, with the leaf extract yielding a higher number of membrane proteins
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