Gross and net production during the spring bloom along the Western Antarctic Peninsula

Author Posting. © The Author(s), 2014. This is the author's version of the work. It is posted here by permission of New Phytologist Trust for personal use, not for redistribution. The definitive version was published in New Phytologist 205 (2015): 182-191, doi:10.1111/nph.13125.This study explores some of the physiological mechanisms responsible for high productivity near the shelf in the Western Antarctic Peninsula despite a short growing season and cold temperature. We measured gross and net primary production at Palmer Station during the summer 2012/2013 via three different techniques: 1) incubation with H218O; 2) incubation with 14CO2; and 3) in situ measurements of O2/Ar and triple oxygen isotope. Additional laboratory experiments were performed with the psychrophilic diatom Fragilariopsis cylindrus. During the spring bloom, which accounted for more than half of the seasonal gross production at Palmer Station, the ratio of net to gross production reached a maximum greater than ~60%, among the highest ever reported. The use of multiple-techniques showed that these high ratios resulted from low heterotrophic respiration and very low daylight autotrophic respiration. Laboratory experiments revealed a similar ratio of net to gross O2 production in F.cylindrus and provided the first experimental evidence for an important level of cyclic electron flow (CEF) in this organism. The low ratio of community respiration to gross primary production observed during the bloom at Palmer Station may be characteristic of high latitude coastal ecosystems and partially supported by a very active CEF in psychrophilic phytoplankton.This study was supported by funds from the US National Science Foundation (Award numbers 1040965 and 1043593). Funding to PDT was provided by the Natural Science and Engineering Research Council of Canada

Proteomic responses to ocean acidification of the marine diazotroph Trichodesmium under iron-replete and iron-limited conditions

Abstract(#br)Growth and dinitrogen (N 2 ) fixation of the globally important diazotrophic cyanobacteria Trichodesmium are often limited by iron (Fe) availability in surface seawaters. To systematically examine the combined effects of Fe limitation and ocean acidification (OA), T. erythraeum strain IMS101 was acclimated to both Fe-replete and Fe-limited concentrations under ambient and acidified conditions. Proteomic analysis showed that OA affected a wider range of proteins under Fe-limited conditions compared to Fe-replete conditions. OA also led to an intensification of Fe deficiency in key cellular processes (e.g., photosystem I and chlorophyll a synthesis) in already Fe-limited T. erythraeum . This is a result of reallocating Fe from these processes to Fe-rich nitrogenase to..

Metabolic balance of coastal Antarctic waters revealed by autonomous pCO2 and ΔO2/Ar measurements

Author Posting. © American Geophysical Union, 2014. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 41 (2014): 6803–6810, doi:10.1002/2014GL061266.We use autonomous gas measurements to examine the metabolic balance (photosynthesis minus respiration) of coastal Antarctic waters during the spring/summer growth season. Our observations capture the development of a massive phytoplankton bloom and reveal striking variability in pCO2 and biological oxygen saturation (ΔO2/Ar) resulting from large shifts in community metabolism on time scales ranging from hours to weeks. Diel oscillations in surface gases are used to derive a high-resolution time series of net community production (NCP) that is consistent with 14C-based primary productivity estimates and with the observed seasonal evolution of phytoplankton biomass. A combination of physical mixing, grazing, and light availability appears to drive variability in coastal Antarctic NCP, leading to strong shifts between net autotrophy and heterotrophy on various time scales. Our approach provides insight into the metabolic responses of polar ocean ecosystems to environmental forcing and could be employed to autonomously detect climate-dependent changes in marine primary productivity.This study was supported by funds from the U.S. National Science Foundation (OPP awards ANT-0823101, ANT-1043559, ANT-1043593, and ANT-1043532) as well as support for PDT and ECA from the National Science and Engineering Research Council of Canada.2015-04-0

Reduced nitrogenase efficiency dominates response of the globally important nitrogen fixer Trichodesmium to ocean acidification

工业革命以来，海洋吸收了约三分之一人为排放的CO2，以迄今3亿年来最快的速度酸化（CO2升高、pH下降），这势必影响海洋生态系统的关键过程和功能。研究团队创新性地从区分海洋酸化过程中CO2上升和pH下降的双重效应入手，揭示了海水CO2升高的正效应小于pH下降的负效应，故酸化的净效应为抑制束毛藻的固氮作用。这是因为酸化引起束毛藻胞质 pH下降，从而降低固氮酶效率、干扰胞内pH稳态、影响细胞产能。在上述研究工作的基础上，进一步系统地测定了固氮和光合系统蛋白的表达量及其含铁量，建立了一个束毛藻的“资源最优化分配”细胞模型。实现了实验数据和数值模型的紧密结合：实验数据是构筑模型的坚实基础，并提高了模型的预测水平；通过模型模拟，加深了对实验发现的认知，并对实验结论进行了时空拓展。 罗亚威博士和史大林博士为论文的共同第一作者和共同通讯作者，史大林课题组的洪海征教授、研究助理沈容和博士生张福婷为共同作者。论文的共同作者还包括美国佛罗里达州立大学助理教授Sven Kranz博士和乔治亚大学副教授Brian Hopkinson博士。【Abstract】The response of the prominent marine dinitrogen (N2)-fixing cyanobacteria Trichodesmium to ocean acidification (OA) is critical to understanding future oceanic biogeochemical cycles. Recent studies have reported conflicting findings on the effect of OA on growth and N2 fixation of Trichodesmium. Here, we quantitatively analyzed experimental data on how Trichodesmium reallocated intracellular iron and energy among key cellular processes in response to OA, and integrated the findings to construct an optimality-based cellular model. The model results indicate that Trichodesmium growth rate decreases under OA primarily due to reduced nitrogenase efficiency. The downregulation of the carbon dioxide (CO2)-concentrating mechanism under OA has little impact on Trichodesmium, and the energy demand of anti-stress responses to OA has a moderate negative effect. We predict that if anthropogenic CO2 emissions continue to rise, OA could reduce global N2 fixation potential of Trichodesmium by 27% in this century, with the largest decrease in iron-limiting regions.This work was funded by the National Key R&D Program of China (2016YFA0601404 and 2016YFA0601203), NSFC (41476093, 41721005, 41890802, 31861143022 and 41376116), and the MEL internal research fund (MELRI1502).本项研究得到了国家重点研发计划（2016YFA0601404 和2016YFA0601203）以及国家自然科学基金系列项目（41476093, 41721005, 41890802, 31861143022 和41376116）的资助

Metabolic balance of coastal Antarctic waters revealed by autonomous pCO₂ and ΔO₂/Ar measurements

We use autonomous gas measurements to examine the metabolic balance (photosynthesis minus respiration) of coastal Antarctic waters during the spring/summer growth season. Our observations capture the development of a massive phytoplankton bloom and reveal striking variability in pCO₂ and biological oxygen saturation (ΔO₂/Ar) resulting from large shifts in community metabolism on time scales ranging from hours to weeks. Diel oscillations in surface gases are used to derive a high-resolution time series of net community production (NCP) that is consistent with ¹⁴C-based primary productivity estimates and with the observed seasonal evolution of phytoplankton biomass. A combination of physical mixing, grazing, and light availability appears to drive variability in coastal Antarctic NCP, leading to strong shifts between net autotrophy and heterotrophy on various time scales. Our approach provides insight into the metabolic responses of polar ocean ecosystems to environmental forcing and could be employed to autonomously detect climate-dependent changes in marine primary productivity

Dissecting the Shared Genetic Architecture of Suicide Attempt, Psychiatric Disorders, and Known Risk Factors

Background Suicide is a leading cause of death worldwide, and nonfatal suicide attempts, which occur far more frequently, are a major source of disability and social and economic burden. Both have substantial genetic etiology, which is partially shared and partially distinct from that of related psychiatric disorders. Methods We conducted a genome-wide association study (GWAS) of 29,782 suicide attempt (SA) cases and 519,961 controls in the International Suicide Genetics Consortium (ISGC). The GWAS of SA was conditioned on psychiatric disorders using GWAS summary statistics via multitrait-based conditional and joint analysis, to remove genetic effects on SA mediated by psychiatric disorders. We investigated the shared and divergent genetic architectures of SA, psychiatric disorders, and other known risk factors. Results Two loci reached genome-wide significance for SA: the major histocompatibility complex and an intergenic locus on chromosome 7, the latter of which remained associated with SA after conditioning on psychiatric disorders and replicated in an independent cohort from the Million Veteran Program. This locus has been implicated in risk-taking behavior, smoking, and insomnia. SA showed strong genetic correlation with psychiatric disorders, particularly major depression, and also with smoking, pain, risk-taking behavior, sleep disturbances, lower educational attainment, reproductive traits, lower socioeconomic status, and poorer general health. After conditioning on psychiatric disorders, the genetic correlations between SA and psychiatric disorders decreased, whereas those with nonpsychiatric traits remained largely unchanged. Conclusions Our results identify a risk locus that contributes more strongly to SA than other phenotypes and suggest a shared underlying biology between SA and known risk factors that is not mediated by psychiatric disorders.Peer reviewe

Diversity of ocean acidification effects on marine N2 fixers

Considering the important role of N2 fixation for primary productivity and CO2 sequestration, it is crucial to assess the response of diazotrophs to ocean acidification. Previous studies on the genus Trichodesmium suggested a strong sensitivity towards ocean acidification. In view of the large functional diversity in N2 fixers, the objective of this study was to improve our knowledge of the CO2 responses of other diazotrophs. To this end, the single-celled Cyanothece sp. and two heterocystous species, Nodularia spumigena and the symbiotic Calothrix rhizosoleniae, were acclimated to two pCO2 levels (380 vs. 980 μatm). Growth rates, cellular composition (carbon, nitrogen and chlorophyll a) as well as carbon and N2 fixation rates (14C incorporation, acetylene reduction) were measured and compared to literature data on different N2 fixers. The three species investigated in this study responded differently to elevated pCO2, showing enhanced, decreased as well as unaltered growth and production rates. For instance, Cyanothece increased production rates with pCO2, which is in line with the general view that N2 fixers benefit from ocean acidification. Due to lowered growth and production of Nodularia, nitrogen input to the Baltic Sea might decrease in the future. In Calothrix, no significant changes in growth or production could be observed, even though N2 fixation was stimulated under elevated pCO2. Reviewing literature data confirmed a large variability in CO2 sensitivity across diazotrophs. The contrasting response patterns in our and previous studies were discussed with regard to the carbonate chemistry in the respective natural habitats, the mode of N2 fixation as well as differences in cellular energy limitation between the species. The group-specific CO2 sensitivities will impact differently on future biogeochemical cycles of open-ocean environments and systems like the Baltic Sea and should therefore be considered in models estimating climate feedback effects

Cellular inorganic carbon fluxes in Trichodesmium: a combined approach using measurements and modelling

To predict effects of climate change on phytoplankton, it is crucial to understand how their mechanisms for carbon acquisition respond to environmental conditions. Aiming to shed light on the responses of extra- and intracellular inorganic C (Ci) fluxes, the cyanobacterium Trichodesmium erythraeum IMS101 was grown with different nitrogen sources (N2 vs NO3 –) and pCO2 levels (380 vs 1400 µatm). Cellular Ci fluxes were assessed by combining membrane inlet mass spectrometry (MIMS), 13C fractionation measurements, and modelling. Aside from a significant decrease in Ci affinity at elevated pCO2 and changes in CO2 efflux with different N sources, extracellular Ci fluxes estimated by MIMS were largely unaffected by the treatments. 13C fractionation during biomass production, however, increased with pCO2, irrespective of the N source. Strong discrepancies were observed in CO2 leakage estimates obtained by MIMS and a 13C-based approach, which further increased under elevated pCO2. These offsets could be explained by applying a model that comprises extracellular CO2 and HCO3 – fluxes as well as internal Ci cycling around the carboxysome via the CO2 uptake facilitator NDH-14. Assuming unidirectional, kinetic fractionation between CO2 and HCO3 – in the cytosol or enzymatic fractionation by NDH-14, both significantly improved the comparability of leakage estimates. Our results highlight the importance of internal Ci cycling for 13C composition as well as cellular energy budgets of Trichodesmium, which ought to be considered in process studies on climate change effects

Inorganic carbon acquisition by aquatic primary producers

The acquisition of dissolved inorganic carbon by aquatic primary producers became increasingly challenging with higher structural complexity of algae, and with simultaneously declining atmospheric CO2 partial pressure. The seemingly easy diffusive supply of CO2 to RubisCO turned into a bottleneck for photosynthesis, which consequently required alternative inorganic carbon acquisition processes and pathways to evolve. In order to ensure sufficient CO2 supply to RubisCO, aquatic photosynthesizing organisms started to employ facilitated CO2 uptake, active HCO3- trafficking across multiple membranes as well as carbonic anhydrases, located at the outer cell membrane and in several cellular compartments. The modes of these so-called CO2-concentrating mechanisms (CCMs) are very diverse, non-canonical even within phylogenetic groups, and possess differently efficient CO2 accumulation capacities, depending on the requirements of RubisCO, the physico-chemical conditions in the boundary layer, membrane properties and cellular architecture. However, different independently evolved CCMs also exhibit a high degree of functional similarity, owing to the functional similarity of the photosynthetic process. To introduce the topic to the reader, this chapter starts with a brief outline of RubisCO´s properties and the reasons why CCMs are required (4.2). Then, the principle chemical nature of dissolved inorganic carbon in water is described (4.3): Its speciation and kinetic behavior and relevant co-determinants of carbonate chemistry. We furthermore touch upon the physico-chemical basis of carbon availability in aquatic environments (4.4.), and subsequently elaborate on the known transport modes of different inorganic carbon species. Subsequently, the current state of knowledge on existing strategies in main algal groups is presented (4.5-4.9). Finally, we consider the operation of CCMs in the context of co-occurring cellular processes (4.10), such as calcification and N2 fixation, which rely on the provision of ample inorganic carbon and/or energy and, in the case of calcification, can have important consequences for compartmental pH homeostasis