Cumulative effects of 20 years of fire, grazing and selective tree cutting on soil water infiltration in sudanian savanna-woodland ecosystem of West Africa

Structural and functional dynamics of savanna-woodland ecosystems are mainly shaped by fire, grazing and wood removal which effects depends both on their intensities. The long-term effects of those disturbances on key soil parameters are still largely unknown. We studied the cumulative effect of 20 years of early fire, grazing and selective tree cutting on soil water infiltration at two experimental sites with contrasting soil conditions (deep silty-clay versus shallow silty-sand) in the sudanian savanna-woodland ecosystems of Burkina Faso. Measurements were carried with a single ring infiltrometer at intervals of 5, 10, 20 and 30 minutes. Results showed that Grazing had negative effect at both sites (P<0.0001). Fire has no effect on infiltration rate at deep soil whereas it has a negative effect on shallow one. Selective wood cutting had beneficial effects for infitration rate at the site with shallow soil. Further, all combined effect of the diffreent treatment resulted in decrease infiltration rate as compared with the control (interaction exclosure, no cutting and no fire). The result suggested that projects which aim to manage or improve soil water properties must take in consideration occurrence of disturbances, soils type and avoid disturbance interaction mainly in shallow sandy soils.Keywords: Disturbances, soil water properties, Burkina Faso, soil compaction, early fire, savanna ecosystem

Wind Erosion Research in Niger: The Experience of ICRISAT and Advanced Research Organizations

In the Sahelian zone of Niger, wind erosion constitutes one, of the major causes of land degradation. This results from low vegetation cover at a time when the most erosive winds are blowing in combination with sandy; easily erodible soils. Through their effect on soil cover, overgrazing by cattle and the rapid expansion of agricultural land have further enhanced the impact of wind erosion on the Sahelian agro-ecosystem. Wind-erosion-induced damage includes direct damage to crops through sandblasting, seedling burial following sand deposition, and topsoil loss..

Simulated weather variables effects on millet fertilized with phosphate rock in the Sahel

The Sudano–Sahelian agroecological zone is characterized by low and variable rainfall regimes and P deficiency. The present study complements previous research efforts and the objective was (i) to use the Newhall Simulation Model (NSM) to characterize three ICRISAT research sites, and (ii) to use output of NSM to develop an empirical model to guide efficient use of rainfall and fertilizers. The results show that length of the periods that rainfall exceeded evapotranspiration was larger in Bengou than in Gobery and Sadoré. Total positive moisture balance during the three growing seasons was 85.7 mm at Bengou and 19.7 mm at Sadoré. The model explained 52% of the variability in millet yields based on curvilinear response to P fertilizer, standardized May–June (Rmj) rainfall, and the number of wet days in the year (BW3). Yields appear more sensitive to BW3 than to Rmj. Their respective elasticity coefficients (E c ) were 0.62 and 0.09. Assessment of the model using R2=0.76 and the D-index = 0.85 showed reasonable agreement between model estimation and actual field yields. The study demonstrates the application of simulation models as a cost-effective means in terms of time and funds to agronomic researc

Sustainable intensification of crop– livestock systems through manure management in eastern and western Africa: Lessons learned and emerging research opportunities

In the mixed farming systems that characterise the semi-arid zones of eastern and western Africa, low rural incomes, the high cost of fertilisers, inappropriate public policies and infrastructural constraints prevent the widespread use of inorganic fertilisers. As population pressure increases and fallow cycles are shortened, such organic sources of plant nutrients as manure, crop residues and compost remain the principal sources of nutrients for soil fertility maintenance and crop production. In this paper, the effect of manure on soil productivity and ecosystem functions and services is discussed. This is followed by highlights of the management practices required to increase manure use efficiency. We end with a discussion of emerging new research opportunities in soil fertility management to enhance crop–livestock integration. Although the application of manure alone produces a significant response, it is not a complete alternative to mineral fertilisers. In most cases the use of manure is part of an internal flow of nutrients within the farm and does not add nutrients from outside the farm. Furthermore, the quantities available are inadequate to meet nutrient demand on large areas. Research highlights have shown that efficiency is enhanced by different management practices including the timing and methods of manure application, its sources and integrated nutrient management. Research opportunities include analysing and understanding the ecosystem functions and services of manure use, the establishment of fertiliser equivalency for different manure sources, the assessment of the best ratios of organic and inorganic plant nutrient combinations, the crop–livestock trade-offs required to solve conflicting demands for feed and soil conservation and the use of legumes to enhance soil fertility and for animal feed. The establishment of decision support system guides and assessment of the economic viability of manure-based technologies in farmer-focused research are presented as powerful management tools intended to maximise output while preserving the environment in the mixed farming systems of the semi-arid zones

Modelling the elimination of river blindness using long-term epidemiological and programmatic data from Mali and Senegal

The onchocerciasis transmission models EPIONCHO and ONCHOSIM have been independently developed and used to explore the feasibility of eliminating onchocerciasis from Africa with mass (annual or biannual) distribution of ivermectin within the timeframes proposed by the World Health Organization (WHO) and endorsed by the 2012 London Declaration on Neglected Tropical Diseases (i.e. by 2020/2025). Based on the findings of our previous model comparison, we implemented technical refinements and tested the projections of EPIONCHO and ONCHOSIM against long-term epidemiological data from two West African transmission foci in Mali and Senegal where the observed prevalence of infection was brought to zero circa 2007–2009 after 15–17 years of mass ivermectin treatment. We simulated these interventions using programmatic information on the frequency and coverage of mass treatments and trained the model projections using longitudinal parasitological data from 27 communities, evaluating the projected outcome of elimination (local parasite extinction) or resurgence. We found that EPIONCHO and ONCHOSIM captured adequately the epidemiological trends during mass treatment but that resurgence, while never predicted by ONCHOSIM, was predicted by EPIONCHO in some communities with the highest (inferred) vector biting rates and associated pre-intervention endemicities. Resurgence can be extremely protracted such that low (microfilarial) prevalence between 1% and 5% can be maintained for 3–5 years before manifesting more prominently. We highlight that post-treatment and post-elimination surveillance protocols must be implemented for long enough and with high enough sensitivity to detect possible residual latent infections potentially indicative of resurgence. We also discuss uncertainty and differences between EPIONCHO and ONCHOSIM projections, the potential importance of vector control in high-transmission settings as a complementary intervention strategy, and the short remaining timeline for African countries to be ready to stop treatment safely and begin surveillance in order to meet the impending 2020/2025 elimination targets

Onchocerciasis prevalence, human migration and risks for onchocerciasis elimination in the Upper Mouhoun, Nakambé and Nazinon river basins in Burkina Faso.

Historically, the whole of Burkina Faso was considered to be endemic for onchocerciasis (except a small area in the far north of the country) with prevalence rates 60-80%, but all endemic areas were included in the World Health Organisation Onchocerciasis Control Programme, which operated a system of vector control by larviciding beginning in 1974. In Burkina Faso larviciding had been phased out by 1989 when it was considered that onchocerciasis had been reduced to levels below the transmission breakpoint (and any residual infections would disappear without further intervention). There was never any mass drug administration against onchocerciasis in Burkina Faso, except in the Bougouriba and Comoé river basins (from 1996 and 2011 to present respectively) because in each of these two areas there was a resurgence of infection, and in parts of the Nakambé River basin and Sissili River basin from 1992 to 1998. However, mass drug administration with ivermectin was also phased in across the whole country starting in 2000 using ivermectin against lymphatic filariasis and is currently being phased out (depending upon the epidemiological parameters). In this publication we report a new epidemiological survey for onchocerciasis which was carried out in 2014 in the Upper Mouhoun, Nakambé and Nazinon river basins in Burkina Faso to evaluate the prevalence and intensity of infection of onchocerciasis. A total of 11,195 people from 61 villages were examined across these three river basins, and onchocerciasis prevalence by skin-snip was below 5% in all villages, below 1% in 57 villages (93% of 61 villages) and zero in 47. In the 14 villages with positive skin snips, prevalence figures ranged from 0.31% to 3.50%. During the survey 31 infected individuals were found. All of them were Burkinabé, of whom 30 had a recent history of residence in Côte d'Ivoire (with a range of 0.5 to 73 microfilariae per skin-snip from two snips per person) and only one had no history of migration and presumably had an autochthonous infection (mean of 0.5 microfilariae per skin snip from two snips). According to parasitological indicators listed by the World Health Organization African Programme for Onchocerciasis Control in 2010, the situation for onchocerciasis was considered to be satisfactory in all three river basins and probably below the transmission threshold, in which case the disease should disappear naturally without the need for further intervention in the absence of continuing immigration. However, the results clearly indicate that infected persons coming from endemic zones of Côte d'Ivoire are settling in small communities which are otherwise nearly free from onchocerciasis in Burkina Faso. They are thus a source of continuing re-introduction of the parasite into the basins and could be a risk for the achievement of onchocerciasis elimination in all three basins. This would justify the continuation of periodic epidemiological surveys to monitor the possible recrudescence of the disease, and entomological (vector) surveys should be undertaken to assess and monitor the residual transmission

Progress towards elimination of onchocerciasis in the Region du Sud-Ouest of Burkina Faso which was previously subject to a recrudescence event after vector control

Background The Sud-Ouest region of Burkina Faso (especially the Bougouriba valley) has been historically problematic with respect to onchocerciasis control, with a recrudescence of infections after vector control carried out the WHO Onchocerciasis Control Programme was halted in 1989. After 1996, mass drug administration of ivermectin was instigated to control the recrudescence so that it would no longer constitute a public health problem. However, in 2010 WHO changed its recommended policy from control to elimination, and in 2013 biannual Community-Directed Treatment with Ivermectin (CDTI) was instigated. Epidemiological surveys were carried-out in 2011 and 2018 to determine whether CDTI was producing a decline in infection levels and progress towards elimination. Methodology/Principal findings A cross-sectional study was conducted across 20 villages in four health districts in 2011 and 29 villages in 2018. Individuals aged five years and above were examined by skin-snip, and the prevalence and microfilarial load was determined for each village. In 2011, 75% of villages had some infections and 20% had prevalences >5%, with a mean prevalence across all villages of 2.63% (range 0.0–9.7%), and community microfilarial load ranging from 0 to 0.25 microfilariae per biopsy. In 2018, nine villages (= 31% of total) had some infections, with prevalences ranging from 0.41% to 3.54%, and a mean prevalence across all villages of 0.37%. Community microfilarial load ranged from 0 to 0.1. Amongst those people found to be microfilarial positive, 87% had a history of migration. Conclusions/significance The endemicity of onchocerciasis infection in the Sud-Ouest region has declined to low levels and seems to be progressing towards elimination. Our findings indicated that biannual CDTI is having good effect, but it should continue for a number of years to ensure elimination of transmission. However, progress towards elimination has a troublesome history in this region, and it would be advisable to select more sentinel villages to have confidence in any future epidemiological and entomological surveys, especially Stop-MDA surveys. With positive individuals migrating between countries, cross-border collaboration needs more attention to ensure effective treatment for onchocerciasis elimination

Genome-wide analysis of ivermectin response by Onchocerca volvulus reveals that genetic drift and soft selective sweeps contribute to loss of drug sensitivity

Treatment of onchocerciasis using mass ivermectin administration has reduced morbidity and transmission throughout Africa and Central/South America. Mass drug administration is likely to exert selection pressure on parasites, and phenotypic and genetic changes in several Onchocerca volvulus populations from Cameroon and Ghana-exposed to more than a decade of regular ivermectin treatment-have raised concern that sub-optimal responses to ivermectin's anti-fecundity effect are becoming more frequent and may spread.Pooled next generation sequencing (Pool-seq) was used to characterise genetic diversity within and between 108 adult female worms differing in ivermectin treatment history and response. Genome-wide analyses revealed genetic variation that significantly differentiated good responder (GR) and sub-optimal responder (SOR) parasites. These variants were not randomly distributed but clustered in ~31 quantitative trait loci (QTLs), with little overlap in putative QTL position and gene content between the two countries. Published candidate ivermectin SOR genes were largely absent in these regions; QTLs differentiating GR and SOR worms were enriched for genes in molecular pathways associated with neurotransmission, development, and stress responses. Finally, single worm genotyping demonstrated that geographic isolation and genetic change over time (in the presence of drug exposure) had a significantly greater role in shaping genetic diversity than the evolution of SOR.This study is one of the first genome-wide association analyses in a parasitic nematode, and provides insight into the genomics of ivermectin response and population structure of O. volvulus. We argue that ivermectin response is a polygenically-determined quantitative trait (QT) whereby identical or related molecular pathways but not necessarily individual genes are likely to determine the extent of ivermectin response in different parasite populations. Furthermore, we propose that genetic drift rather than genetic selection of SOR is the underlying driver of population differentiation, which has significant implications for the emergence and potential spread of SOR within and between these parasite populations