Open Nomenclature in the biodiversity era

Summary The uncertainty or the provisional status of a taxonomic identification can be expressed by a set of terms and abbreviations known as Open Nomenclature (ON) qualifiers. This approach is widely applied across biological disciplines, and a high amount of biodiversity data left in ON can be found in literature and data bases. However, there is no consensus about ON qualifiers and their meaning. The use of ON qualifiers has been reviewed in order to provide a summary and guide to current practice in zoology. Some recommendation is given to avoid inconsistencies or vagueness. A flow chart is proposed to clarify the sources of uncertainties during identification and to facilitate the application of ON qualifiers. This review provides a guide for taxonomists and ecologists currently involved in biomonitoring and biodiversity programmes, as well as for researchers dealing with biodiversity data infrastructures and tools, offering a starting point for a methodological harmonization

M-AMBI revisited: looking inside a widely-used benthic index

M-AMBI is a multimetric index for assessing the ecological quality status of marine and transitional waters. It is based on benthic macroinver- tebrates and integrates AMBI, a biotic index based on species sensitivity/tolerance, with diversity and rich- ness, making it compliant with the European Water Framework Directive. The success of AMBI paved the way for the introduction of M-AMBI, which was subsequently incorporated into the regulations of several European countries. The M-AMBI algorithm integrates the metrics by means of factor analysis (FA). In this paper, we first reproduced the algorithm using the open source R software. This enabled us to point out that FA is not functional to M-AMBI, and its omission does not appreciably change the results. We then enhanced the applicability of the index, making it independent of the number of samples. In this way, M-AMBI is closely approximated by the simple mean of the normalised metrics with no need for multivar- iate techniques. Finally, we further simplified the approach, presenting a bivariate version that is still highly correlated with M-AMBI, in which the consti- tutive metrics are reduced to a diversity measure and a species sensitivity index. The properties of this bivariate version include simplicity, transparency, robustness, and openness

The Italian long-term ecosystem research (LTER-Italy) network: results, opportunities, and challenges for coastal transitional ecosystems

1 - The Long-Term Ecosystem Research (LTER) network, now a global reality, was founded on a combination of long-term ecological studies, short-term experiments, and comparisons among sites and eco-domains. 2 - The LTER-Italy network was officially established as a formal member of the LTER international network in 2006, following a wider on-going process in Europe; it currently consists of 22 sites representing the main ecosystem typologies of Italy. Four coastal transitional ecosystem sites are included in the LTER-Italy network: on the northern Peninsula, these include the Venice Lagoon and the lagoons of the Po River Delta, which are characterized by a temperate climate and the influence of tides; and in the southern sector, these include the coastal ecosystems of Sardinia and the Mar Piccolo of Taranto, which are characterized by a Mediterranean climate and the absence of sensible tides. 3 - In this paper, we present and discuss three main issues: the LTER-International and LTER-Europe context, emphasising the most practical issues and activities that must be addressed for the effective organization and maintenance of LTER networks; the history, structure, and perspectives of the national LTER-Italy network; and the opportunities, strengths, and weaknesses related to participation of the LTER-Italy network in the study of coastal transitional ecosystems

Teunis Keppel Acknowledged to Rev. Albertus C. Van Raalte That Van Raalte Had Received a Sum of $11.79 of Interest from Various Funds and People for the Ebenezer Fund and Had Turned it Over to Keppel

Teunis Keppel acknowledged to Rev. Albertus C. Van Raalte that Van Raalte had received a sum of $11.79 of interest from various funds and people for the Ebenezer Fund and had turned it over to Keppel.https://digitalcommons.hope.edu/vrp_1870s/1176/thumbnail.jp

Teunis Keppel Gave Rev. Albertus C. Van Raalte a Receipt for the $23.24 in Interest of Funds Designated for the Ebenezer Fund

Teunis Keppel gave Rev. Albertus C. Van Raalte a receipt for the $23.24 in interest of funds designated for the Ebenezer Fund.https://digitalcommons.hope.edu/vrp_1870s/1164/thumbnail.jp

First record and establishment of Branchiomma coheni (Polychaeta: Sabellidae) in the Atlantic Ocean and review of non – indigenous species of the genus

Keppel, Erica, Tovar, Maria Ana, Ruiz, Gregory (2015): First record and establishment of Branchiomma coheni (Polychaeta: Sabellidae) in the Atlantic Ocean and review of non – indigenous species of the genus. Zootaxa 4058 (4): 499-518, DOI: http://dx.doi.org/10.11646/zootaxa.4058.4.

A Global invader or a complex of regionally distributed species? Clarifying the status of an invasive calcareous tubeworm Hydroides dianthus (Verrill, 1873) (Polychaeta: Serpulidae) using DNA barcoding

Clarifying taxonomic status is essential to understanding invasion source and the spread of invasive species. Here we used barcoding gene cytochrome c oxidase subunit I to explore the issue in a common fouling invasive species Hydroides dianthus. The species was originally described from off New England, USA, reported along the east coast of North America down to Florida and the Caribbean region, introduced to China, Europe, Japan and West Africa via anthropogenic transport and is now collected in Brazil for the first time. Unlike most congeners, H. dianthus has tolerance for a wide temperature range, being distributed from temperate to subtropical waters. Our results based on 112 specimens collected from 17 localities worldwide confirmed that H. dianthus sensu stricto is indeed a global invader. Observed higher haplotypes diversity in the Mediterranean seems to contradict the currently accepted native range of H. dianthus sensu stricto in the USA. The study also revealed the existence of a potential cryptic species H. cf. dianthus with a genetic distance of 5.6%. The cryptic lineage found in Texas was evidently introduced to the Black Sea only recently. Given that both lineages within H. dianthus are invasive, a greater emphasis on adequate monitoring and management of the routes responsible for introductions of this species is needed.12 page(s

The fouling serpulids (Polychaeta: Serpulidae) from United States coastal waters: an overview

Serpulids are an important component of fouling communities. This paper provides an overview of the serpulid species found in North America, as part of a broader study of fouling invertebrates focused on NIS (non-indigenous species) in United States coastal ecosystems. Almost 4400 serpulid specimens were examined from selected fouling plates. Fouling plates were deployed in 26 bays and coastal lagoons along the continental coasts of the United States and Hawaiian islands, primarily in bays and lagoons with salinities averaging 20‰ or greater. Twenty-five serpulid species were identified, including four new records for the United States (Ficopomatus uschakovi, Hydroides cf. brachyacantha, H. longispinosa and Protula longiseta), three known NIS, two presumed NIS, three cryptogenic serpulids, and several range extensions. Crucigera websteri extends its northward range from Santa Barbara Island to Humboldt Bay, California; Ficopomatus enigmaticus, first recorded in North America from San Francisco, California in 1920, Rockport, Texas in 1952 and Barnegat Bay, New Jersey in 1980, is now recorded at additional localities on the east coast (Chesapeake Bay, Virginia, Charleston, South Carolina and Indian River, Florida) and the northern Gulf of Mexico (Galveston Bay, Texas); F. miamiensis extends its westward range from Louisiana to Texas; F. uschakovi, an Indo-Pacific and Western African species, was recorded formally for the first time from the northern Gulf of Mexico (Galveston Bay and Corpus Christi, Texas) and the east coast of Florida (Jacksonville). Hydroides cf. brachyacantha extends its northward range from Curaҫao to Pensacola Bay, Florida; H. dirampha from Veracruz, Mexico to Corpus Christi, Texas; H. floridana extends its westward range from Louisiana to Texas; H. gracilis extends its northward range from Pacific Grove to San Francisco, California; Salmacina huxleyi from Cape Hatteras, North Carolina to Rhode Island; and Spirobranchus minutus from Veracruz, Mexico to Pensacola Bay, Florida. The following additional species range extensions are provisional in that they represent only one record or were not found in the most recent surveys (e.g., Hydroides elegans - east coast): H. longispinosa from Marshall Islands to Oahu, Hawaii; Protula balboensis from Florida to Texas; P. longiseta from the Mexican Caribbean to the Indian River, Florida; H. elegans from San Francisco to Humboldt Bay, northern California and on the east coast from the Indian River, Florida, to Cape Cod, Massachusetts. Among surveyed bays, Biscayne Bay, Florida and Corpus Christi, Texas (northern Gulf of Mexico) had the greatest number of species (14 and 8, respectively); in contrast, almost all sites in Alaska, Washington, Oregon (northwest Pacific), Rhode Island, Virginia and South Carolina (Atlantic) had only one or two species each. Hydroides dianthus was, by far, the most abundant serpulid species on fouling plates in the northern Gulf of Mexico and the east coast, while Pseudochitinopoma occidentalis was the most abundant serpulid detected on the west coast. For each species recorded herein, we include the synonyms and some key references, a material studied section, a diagnosis, and updated distributional information. A checklist and identification key to the known shallow-water serpulids sensu stricto of the United States are included

The fouling serpulids (Polychaeta: Serpulidae) from United States coastal waters: an overview

Serpulids are an important component of fouling communities. This paper provides an overview of the serpulid species found in North America, as part of a broader study of fouling invertebrates focused on NIS (non-indigenous species) in United States coastal ecosystems. Almost 4400 serpulid specimens were examined from selected fouling plates. Fouling plates were deployed in 26 bays and coastal lagoons along the continental coasts of the United States and Hawaiian islands, primarily in bays and lagoons with salinities averaging 20‰ or greater. Twenty-five serpulid species were identified, including four new records for the United States (Ficopomatus uschakovi, Hydroides cf. brachyacantha, H. longispinosa and Protula longiseta), three known NIS, two presumed NIS, three cryptogenic serpulids, and several range extensions. Crucigera websteri extends its northward range from Santa Barbara Island to Humboldt Bay, California; Ficopomatus enigmaticus, first recorded in North America from San Francisco, California in 1920, Rockport, Texas in 1952 and Barnegat Bay, New Jersey in 1980, is now recorded at additional localities on the east coast (Chesapeake Bay, Virginia, Charleston, South Carolina and Indian River, Florida) and the northern Gulf of Mexico (Galveston Bay, Texas); F. miamiensis extends its westward range from Louisiana to Texas; F. uschakovi, an Indo-Pacific and Western African species, was recorded formally for the first time from the northern Gulf of Mexico ((Galveston Bay and Corpus Christi, Texas) and the east coast of Florida (Jacksonville). Hydroides cf. brachyacantha extends its northward range from Curaҫao to Pensacola Bay, Florida; H. dirampha from Veracruz, Mexico to Corpus Christi, Texas; H. floridana extends its westward range from Louisiana to Texas; H. gracilis extends its northward range from Pacific Grove to San Francisco, California; Salmacina huxleyi from Cape Hatteras, North Carolina to Rhode Island; and Spirobranchus minutus from Veracruz, Mexico to Pensacola Bay, Florida. The following additional species range extensions are provisional in that they represent only one record or were not found in the most recent surveys (e.g., Hydroides elegans - east coast): H. longispinosa from Marshall Islands to Oahu, Hawaii; Protula balboensis from Florida to Texas; P. longiseta from the Mexican Caribbean to the Indian River, Florida; H. elegans from San Francisco to Humboldt Bay, northern California and on the east coast from the Indian River, Florida, to Cape Cod, Massachusetts. Among surveyed bays, Biscayne Bay, Florida and Corpus Christi, Texas (northern Gulf of Mexico) had the greatest number of species (14 and 8, respectively); in contrast, almost all sites in Alaska, Washington, Oregon (northwest Pacific), Rhode Island, Virginia and South Carolina (Atlantic) had only one or two species each. Hydroides dianthus was, by far, the most abundant serpulid species on fouling plates in the northern Gulf of Mexico and the east coast, while Pseudochitinopoma occidentalis was the most abundant serpulid detected on the west coast. For each species recorded herein, we include the synonyms and some key references, a material studied section, a diagnosis, and updated distributional information. A checklist and identification key to the known shallow-water serpulids sensu stricto of the United States are included