199 research outputs found

    Phylogenetic Analyses of Glycosyl Hydrolase Family 6 Genes in Tunicates: Possible Horizontal Transfer

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    Horizontal gene transfer (HGT) is the movement of genetic material between different species. Although HGT is less frequent in eukaryotes than in bacteria, several instances of HGT have apparently shaped animal evolution. One well-known example is the tunicate cellulose synthase gene, CesA, in which a gene, probably transferred from bacteria, greatly impacted tunicate evolution. A Glycosyl Hydrolase Family 6 (GH6) hydrolase-like domain exists at the C-terminus of tunicate CesA, but not in cellulose synthases of other organisms. The recent discovery of another GH6 hydrolase-like gene (GH6-1) in tunicate genomes further raises the question of how tunicates acquired GH6. To examine the probable origin of these genes, we analyzed the phylogenetic relationship of GH6 proteins in tunicates and other organisms. Our analyses show that tunicate GH6s, the GH6-1 gene, and the GH6 part of the CesA gene, form two independent, monophyletic gene groups. We also compared their sequence signatures and exon splice sites. All tunicate species examined have shared splice sites in GH6-containing genes, implying ancient intron acquisitions. It is likely that the tunicate CesA and GH6-1 genes existed in the common ancestor of all extant tunicates

    Improving the tensile properties of additively manufactured β-containing tial alloys via microstructure control focusing on cellular precipitation reaction

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    The effect of a two-step heat treatment on the microstructure and high-temperature tensile properties of β-containing Ti-44Al-4Cr (at%) alloys fabricated by electron beam powder bed fusion were examined by focusing on the morphology of α2/γ lamellar grains and β/γ cells precipitated at the lamellar grain boundaries by a cellular precipitation reaction. The alloys subjected to the first heat treatment step at 1573 K in the α + β two-phase region exhibit a non-equilibrium microstructure consisting of the α2/γ lamellar grains with a fine lamellar spacing and a β/γ duplex structure located at the grain boundaries. In the second step of heat treatment, i.e., aging at 1273 K in the β + γ two-phase region, the β/γ cells are discontinuously precipitated from the lamellar grain boundaries due to excess Cr supersaturation in the lamellae. The volume fraction of the cells and lamellar spacing increase with increasing aging time and affect the tensile properties of the alloys. The aged alloys exhibit higher strength and comparable elongation at 1023 K when compared to the as-built alloys. The strength of these alloys is strongly dependent on the volume fraction and lamellar spacing of the α2/γ lamellae. In addition, the morphology of the β/γ cells is also an important factor controlling the fracture mode and ductility of these alloys.Cho K., Odo H., Okamoto K., et al. Improving the tensile properties of additively manufactured β-containing tial alloys via microstructure control focusing on cellular precipitation reaction. Crystals, 11, 7, 809. https://doi.org/10.3390/cryst11070809

    Bactericidal Effects of Diode Laser Irradiation on Enterococcus faecalis Using Periapical Lesion Defect Model

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    Objective. Photodynamic therapy has been expanded for use in endodontic treatment. The aim of this study was to investigate the antimicrobial effects of diode laser irradiation on endodontic pathogens in periapical lesions using an in vitro apical lesion model. Study Design. Enterococcus faecalis in 0.5% semisolid agar with a photosensitizer was injected into apical lesion area of in vitro apical lesion model. The direct effects of irradiation with a diode laser as well as heat produced by irradiation on the viability of microorganisms in the lesions were analyzed. Results. The viability of E. faecalis was significantly reduced by the combination of a photosensitizer and laser irradiation. The temperature caused by irradiation rose, however, there were no cytotoxic effects of heat on the viability of E. faecalis. Conclusion. Our results suggest that utilization of a diode laser in combination with a photosensitizer may be useful for clinical treatment of periapical lesions

    Epitaxial graphene on SiC formed by the surface structure control technique

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    The thermal decomposition of silicon carbide (SiC) is a promising method for producing wafer-scale single-crystal graphene. The optimal growth condition for high-mobility epitaxial graphene fabricated by infrared rapid thermal annealing is discussed in this paper. The surface structures, such as step-terrace and graphene coverage structures, on a non-off-axis SiC(0001) substrate were well controlled by varying the annealing time in a range below 10 min. The mobility of graphene grown at 1620 ºC for 5 min in 100 Torr Ar ambient had a maximum value of 2089 cm2V-1s-1. We found that the causes of the mobility reduction were low graphene coverage, high sheet carrier density, and nonuniformity of the step structure

    Quantum-grade nanodiamonds for ultrabright spin detection in live cells

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    Optically accessible spin-active nanomaterials are promising as quantum nanosensors for probing biological samples. However, achieving bioimaging-level brightness and high-quality spin properties for these materials is challenging and hinders their application in quantum biosensing. Here, we demonstrate ultrabright fluorescent nanodiamonds (NDs) containing 0.6-1.3-ppm nitrogen-vacancy (NV) centers by spin-environment engineering via enriching spin-less 12C-carbon isotopes and reducing substitutional nitrogen spin impurities. The NDs, readily introduced into cultured cells, exhibited substantially narrow optically detected magnetic resonance (ODMR) spectra, requiring 16-times less microwave excitation power to give an ODMR depth comparable to that of conventional type-Ib NDs. They show average spin-relaxation times of T1 = 0.68 ms and T_2 = 1.6 us (1.6 ms and 2.7 us maximum) that were 5- and 11-fold longer than those of type-Ib, respectively. The bulk-like NV spin properties and bright fluorescence demonstrated in this study significantly improve the sensitivity of ND-based quantum sensors for biological applications

    On-site single pollen metabolomics reveals varietal differences in phosphatidylinositol synthesis under heat stress conditions in rice

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    Although a loss of healthy pollen grains induced by metabolic heat responses has been indicated to be a major cause of heat-induced spikelet sterility under global climate change, to date detailed information at pollen level has been lacking due to the technical limitations. In this study, we used picolitre pressure-probe-electrospray-ionization mass spectrometry (picoPPESI-MS) to directly determine the metabolites in heat-treated single mature pollen grains in two cultivars, heat-tolerant cultivar, N22 and heat-sensitive cultivar, Koshihikari. Heat-induced spikelet fertility in N22 and Koshihikari was 90.0% and 46.8%, respectively. While no treatment difference in in vitro pollen viability was observed in each cultivar, contrasting varietal differences in phosphatidylinositol (PI)(34:3) have been detected in mature pollen, together with other 106 metabolites. Greater PI content was detected in N22 pollen regardless of the treatment, but not for Koshihikari pollen. In contrast, there was little detection for phosphoinositide in the single mature pollen grains in both cultivars. Our findings indicate that picoPPESI-MS analysis can efficiently identify the metabolites in intact single pollen. Since PI is a precursor of phosphoinositide that induces multiple signaling for pollen germination and tube growth, the active synthesis of PI(34:3) prior to germination may be closely associated with sustaining spikelet fertility even at high temperatures.Fil: Wada, Hiroshi. Kyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization; JapónFil: Hatakeyama, Yuto. Kyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization; JapónFil: Nakashima, Taiken. Hokkaido University; JapónFil: Nonami, Hiroshi. Ehime University; JapónFil: Erra Balsells, Rosa. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Centro de Investigaciones en Hidratos de Carbono. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Centro de Investigaciones en Hidratos de Carbono; ArgentinaFil: Hakata, Makoto. Kyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization; JapónFil: Nakata, Keisuke. Ehime University; JapónFil: Hiraoka, Kenzo. University Of Yamanashi; JapónFil: Onda, Yayoi. Ehime University; JapónFil: Nakano, Hiroshi. Kyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization; Japó
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