Bycatch in 36 and 40 mm PA Turkish twin rigged beam trawl codends

The Turkish twin rigged beam trawl which has two identical nets rigged side by side on the same beam targets mainly the Parapenaeus longirostris, although some bycatch fish species have also become target species. Thus, landings of the shrimp beam trawling fleet also include some commercially valuable fishes. Our study focused on the bycatch commercial species which are caught by the beam trawl fishery with nominal mesh sizes 36 and 40 mm PA (diamond) codend in the Sea of Marmara (Turkey) and also on the minimum landing size (MLS) established for Merluccius merluccius, Merlangius merlangus euxinus, Mullus surmuletus, Trachurus trachurus and Pomatomus saltatrix. Since there was no MLS value for Spicara smaris, the length at first maturity (LFM) was used for this species. Experiments were carried out onboard the commercial beam trawler. In 20 hauls, the average codend catch weight was 63.12 kg for 36 mm PA and 66.51 kg for 40 mm PA. On the other hand, for 36 mm PA, 83.5% of M. merluccius, 74.3% of M. merlangus euxinus, 29.7% of T. trachurus, 10.8% of P. saltatrix and 8.6% of M. surmuletus were below the MLS. For 40 mm PA, 88.9% of M. merlangus euxinus, 87.7% of M. merluccius, 42.5% of T. trachurus, 7.2% of P. saltatrix and 6.7% of M. surmuletus were below MLS. In addition, 7.5% of S. smaris were below length at first maturity (LFM) for 36 PA codends.Key words: Beam trawl, rose shrimp, Parapenaeus longirostris, bycatch, discards, minimum landing size, Sea of Marmara, Turkey

Accuracy, Reproducibility And Bias Of Next Generation Sequencing For Quantitative Small RNA Profiling: A Multiple Protocol Study Across Multiple Laboratories [preprint]

Small RNA-seq is increasingly being used for profiling of small RNAs. Quantitative characteristics of long RNA-seq have been extensively described, but small RNA-seq involves fundamentally different methods for library preparation, with distinct protocols and technical variations that have not been fully and systematically studied. We report here the results of a study using common references (synthetic RNA pools of defined composition, as well as plasma-derived RNA) to evaluate the accuracy, reproducibility and bias of small RNA-seq library preparation for five distinct protocols and across nine different laboratories. We observed protocol-specific and sequence-specific bias, which was ameliorated using adapters for ligation with randomized end-nucleotides, and computational correction factors. Despite this technical bias, relative quantification using small RNA-seq was remarkably accurate and reproducible, even across multiple laboratories using different methods. These results provide strong evidence for the feasibility of reproducible cross-laboratory small RNA-seq studies, even those involving analysis of data generated using different protocols

DIAGNOSIS OF PERSISTENT BVD IN ONE DAY OLD AND OLDER THAN 30 DAYS CALVES WITH RAPID KIT TESTS

Bovine Viral Diarrhoea (BVD) is an important disease of cattle which causes alimentary, respiratory and reproductive disorders and serious economic losses. Today, eradication of disease is compulsory for the increase of dairies and achieving more healthier herds. In cattle, if the calves are infected with BVD from the uterus in the first trimester of pregnancy, they are born persistent infected (PI) antigen(+). The PI calves are smaller or normal in apperance than normal calves. Persistent infected (PI) calves spread the virus throughout their lives and infect their surroundings. BVD causes early embrionic death, calves born with anomalies and immunosuppression in infected animals. In this study 200 calves between 1–30 days old from Burdur province are screened with BVD rapid test kit. In the screening, 13 calves (6.5%) are found BVDV ag(+). The gender of PI calves are found 4% female (8/200) and 2.5% male (5/200). In the 5% of PI calves (10/200), respiratory and alimentary problems were clinically seen. The antigen(+) animals are put out of the herd and vaccination protocols are recommended. In this study, diagnosing the disease can be made rapidly by both clinicians and farmers, also putting the virus spreading persistent calves out of herd without losing time and a successful struggle can be made against BVD, are shown

Discovery of Delta Scuti variables in eclipsing binary systems II.Southern TESS field search

The presence of pulsating stars in eclipsing binary systems (EBs) makes these objects significant since they allow us to investigate the stellar interior structure and evolution. Different types of pulsating stars could be found in EBs such as Delta Scuti variables. Delta Scuti stars in EBs have been known for decades and the increasing number of such systems is important for understanding pulsational structure. Hence, in this study, a research was carried out on the southern TESS field to discover new Delta Scuti stars in EBs. We produced an algorithm to search for detached and semi-detached EBs considering three steps; the orbital period (P$_{orb}$)'s harmonics in the Fourier spectrum, skewness of the light curves, and classification of \textsc{UPSILON} program. If two of these steps classify a system as an EB, the algorithm also identifies it as an EB. The TESS pixel files of targets were also analyzed to see whether the fluxes are contaminated by other systems. No contamination was found. We researched the existence of pulsation through EBs with a visual inspection. To confirm Delta Scuti-type oscillations, the binary variation was removed from the light curve, and residuals were analyzed. Consequently, we identified 42 Delta Scuti candidates in EBs. The P$_{orb}$, $L$, and M$_{V}$ of systems were calculated. Their positions on the H-R diagram and the known orbital-pulsation period relationship were analyzed. We also examined our targets to find if any of them show frequency modulation with the orbital period and discovered one candidate of tidally tilted pulsators.Comment: Published in MNRA

Modelling of Powder Removal for Additive Manufacture Postprocessing

This is the final version. Available on open access from MDPI via the DOI in this recordData Availability Statement: No data for public archival are reported in this study. This study does not report any data of this kind.A critical challenge underpinning the adoption of Additive Manufacture (AM) as a technology is the postprocessing of manufactured components. For Powder Bed Fusion (PBF), this can involve the removal of powder from the interior of the component, often by vibrating the component to fluidise the powder to encourage drainage. In this paper, we develop and validate a computational model of the flow of metal powder suitable for predicting powder removal from such AM components. The model is a continuum Eulerian multiphase model of the powder including models for the granular temperature; the effect of vibration can be included through appropriate wall boundaries for this granular temperature. We validate the individual sub-models appropriate for AM metal powders by comparison with in-house and literature experimental results, and then apply the full model to a more complex geometry typical of an AM Heat Exchanger. The model is shown to provide valuable and accurate results at a fraction of the computational cost of a particle-based model.Engineering and Physical Sciences Research Council (EPSRC)Innovate U

Use of rating systems in the process towards sustainable construction

Since the large scale industrialization occurred, the profit oriented human activity has led to a constantly growing environmental degradation. Nowadays, that the actual severity of the problem in hand is impossible to ignore and the spectrum of the future consequences emerges in its full extent, several actions towards the adaptation of sustainability principles in the most problematic sectors of human activity are undertaken. One of these sectors is building sector, incorporating the production, transport, use and replacement of building materials, the use of the building itself (energy consumption for lighting, ventilation, heating and cooling, water consumption etc), the reuse of the building or its materials, the demolition of the building and the disposal of the demolition products. The energy consumed in operating buildings serves as indication of the building sector’s contribution to the total environmental aggravation induced by human activity. According to (OECD, 2003), in the European OECD countries, the building sector consumes the highest amount of energy (40%) in comparison to the transport (22%) and industry sectors (38%). Given the fact that the afore-mentioned quantities include the energy amounts consumed only for the operation of the building, while other processes – unbreakably bonded to construction – such as manufacture and transport of building materials, are not cocalculated, an estimation regarding the impact of the building sector on the environment can be drawn.COST, European Science Foundatio

Coupling of volume of fluid and level set methods in condensing heat transfer simulations

This is the author accepted manuscript. The final version is available from Taylor & Francis via the DOI in this record Additive Manufacturing (AM) is a rapidly developing new technology which allows the manufacture of arbitrarily complex geometries, and which is likely to transform heat exchanger design. To drive this transformation we need to develop computer modelling techniques to model fluid flow, heat exchange and phase change in arbitrarily complex domains, such as can be manufactured using AM. The present work aims to develop a computational fluid dynamics (CFD) model for heat transfer and phase change, robust enough to model compact AM heat exchangers for automotive fuel cell application. The hydrodynamics of the two-phase flow is captured via the Volume Of Fluid (VOF) approach, coupled with a Level Set method in order to capture the sharp interface between liquid and vapour in laminar film condensation. The Stefan problem is used to show the improvement of the interface tracking with LS-VOF against VOF approach. The resulting complete condensation model is applied for the first time for a complex AM geometry and validated against experimental data

The single-sided pulsator CO Camelopardalis

Abstract CO Cam (TIC 160268882) is the second “single-sided pulsator” to be discovered. These are stars where one hemisphere pulsates with a significantly higher amplitude than the other side of the star. CO Cam is a binary star comprised of an Am δ Sct primary star with Teff = 7070 ± 150 K, and a spectroscopically undetected G main-sequence secondary star. The dominant pulsating side of the primary star is centred on the L1 point. We have modelled the spectral energy distribution combined with radial velocities, and independently the TESS light curve combined with radial velocities. Both of these give excellent agreement and robust system parameters for both stars. The δ Sct star is an oblique pulsator with at least four low radial overtone (probably) f modes with the pulsation axis coinciding with the tidal axis of the star, the line of apsides. Preliminary theoretical modelling indicates that the modes must produce much larger flux perturbations near the L1 point, although this is difficult to understand because the pulsating star does not come near to filling its Roche lobe. More detailed models of distorted pulsating stars should be developed. These newly discovered single-sided pulsators offer new opportunities for astrophysical inference from stars that are oblique pulsators in close binary stars