Pure stands of temperate forest tree species modify soil respiration and N turnover

International audienceThe effects of five different tree species common in the temperate zone, i.e. beech (Fagus sylvatica L.), pedunculate oak (Quercus robur L.), Norway spruce (Picea abies [L.] Karst), Japanese larch (Larix leptolepis [Sichold and Zucc.] Gordon) and mountain pine (Pinus mugo Turra), on soil respiration, gross N mineralization and gross nitrification rates were investigated. Soils were sampled in spring and summer 2002 at a forest trial in Western Jutland, Denmark, where pure stands of the five tree species of the same age were growing on the same soil. Soil respiration, gross rates of N mineralization and nitrification were significantly higher in the organic layers than in the Ah horizons for all tree species and both sampling dates. In summer (July), the highest rates of soil respiration, gross N mineralization and gross nitrification were found in the organic layer under spruce, followed by beech > larch > oak > pine. In spring (April), these rates were also higher under spruce compared to the other tree species, but were significantly lower than in summer. For the Ah horizons no clear seasonal trend was observed for any of the processes examined. A linear relationship between soil respiration and gross N mineralization (r2=0.77), gross N mineralization and gross nitrification rates (r2=0.72), and between soil respiration and gross nitrification (r2=0.81) was found. The results obtained underline the importance of considering the effect of forest type on soil C and N transformations

A simple model to estimate exchange rates of nitrogen dioxide between the atmosphere and forests

International audienceA simple model (2layer) was constructed that describes the exchange of the reactive gases NO, NO2 and O3 between forest and the atmosphere. The model uses standard equations to describe exchange processes and uptake of gases. It also takes into account reactions taking place in the trunk space between NO and O3 and photolysis of NO2. All equations are solved analytically leading to a scheme efficient enough to allow implementation in a large scale dispersion model such as the EMEP model. The model is tested on two comprehensive datasets obtained in a coniferous forest and a deciduous forest. The model calculations of NO2 and O3 fluxes to the forest were compared with observations of these fluxes. Although the comparison is often not perfect some of the striking features of the observed fluxes i.e. upward fluxes of NO2 were simulated quite well. The impact of chemical reactions between O3, NO and NO2 in the trunk space appear to have a significant effect on the deposition rate of O2. This is especially true during the night and more so for forests emitting large amounts of NO

Factors controlling regional differences in forest soil emission of nitrogen oxides (NO and N2O)

Peer reviewe

A Taxonomy of Causality-Based Biological Properties

We formally characterize a set of causality-based properties of metabolic networks. This set of properties aims at making precise several notions on the production of metabolites, which are familiar in the biologists' terminology. From a theoretical point of view, biochemical reactions are abstractly represented as causal implications and the produced metabolites as causal consequences of the implication representing the corresponding reaction. The fact that a reactant is produced is represented by means of the chain of reactions that have made it exist. Such representation abstracts away from quantities, stoichiometric and thermodynamic parameters and constitutes the basis for the characterization of our properties. Moreover, we propose an effective method for verifying our properties based on an abstract model of system dynamics. This consists of a new abstract semantics for the system seen as a concurrent network and expressed using the Chemical Ground Form calculus. We illustrate an application of this framework to a portion of a real metabolic pathway