163 research outputs found

    Model selection in ecology and evolution

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    Different processes lead to similar patterns: a test of codivergence and the role of sea level and climate changes in shaping a southern temperate freshwater assemblage

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    <p>Abstract</p> <p>Background</p> <p>Understanding how freshwater assemblages have been formed and maintained is a fundamental goal in evolutionary and ecological disciplines. Here we use a historical approach to test the hypothesis of codivergence in three clades of the Chilean freshwater species assemblage. Molecular studies of freshwater crabs (<it>Aegla</it>: Aeglidae: Anomura) and catfish (<it>Trichomycterus arealatus</it>: Trichomycteridae: Teleostei) exhibited similar levels of genetic divergences of mitochondrial lineages between species of crabs and phylogroups of the catfish, suggesting a shared evolutionary history among the three clades in this species assemblage.</p> <p>Results</p> <p>A phylogeny was constructed for <it>Trichomycterus areolatus </it>under the following best-fit molecular models of evolution GTR + I + R, HKY + I, and HKY for cytochrome <it>b</it>, growth hormone, and rag 1 respectively. A GTR + I + R model provided the best fit for both 28S and mitochondrial loci and was used to construct both <it>Aegla </it>phylogenies. Three different diversification models were observed and the three groups arose during different time periods, from 2.25 to 5.05 million years ago (Ma). Cladogenesis within <it>Trichomycterus areolatus </it>was initiated roughly 2.25 Ma (Late Pliocene - Early Pleistocene) some 1.7 - 2.8 million years after the basal divergences observed in both <it>Aegla </it>clades. These results reject the hypothesis of codivergence.</p> <p>Conclusions</p> <p>The similar genetic distances between terminal sister-lineages observed in these select taxa from the freshwater Chilean species assemblage were formed by different processes occurring over the last ~5.0 Ma. Dramatic changes in historic sea levels documented in the region appear to have independently shaped the evolutionary history of each group. Our study illustrates the important role that history plays in shaping a species assemblage and argues against assuming similar patterns equal a shared evolutionary history.</p

    Factors Associated with Revision Surgery after Internal Fixation of Hip Fractures

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    Background: Femoral neck fractures are associated with high rates of revision surgery after management with internal fixation. Using data from the Fixation using Alternative Implants for the Treatment of Hip fractures (FAITH) trial evaluating methods of internal fixation in patients with femoral neck fractures, we investigated associations between baseline and surgical factors and the need for revision surgery to promote healing, relieve pain, treat infection or improve function over 24 months postsurgery. Additionally, we investigated factors associated with (1) hardware removal and (2) implant exchange from cancellous screws (CS) or sliding hip screw (SHS) to total hip arthroplasty, hemiarthroplasty, or another internal fixation device. Methods: We identified 15 potential factors a priori that may be associated with revision surgery, 7 with hardware removal, and 14 with implant exchange. We used multivariable Cox proportional hazards analyses in our investigation. Results: Factors associated with increased risk of revision surgery included: female sex, [hazard ratio (HR) 1.79, 95% confidence interval (CI) 1.25-2.50; P = 0.001], higher body mass index (fo

    Ingley_et_al_E&E_FINAL__Broseni_Bterrabensis_SL_M_Boldness

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    Data file consists of an Excel spread sheet. The spread sheet contains the identification number associated with each individual tested, species, sex, mass (g), standard length (mm), and time to emerge from a shelter into a novel environment (seconds)

    Data from: Selection is stronger in early-versus-late stages of divergence in a Neotropical livebearing fish

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    How selection acts to drive trait evolution at different stages of divergence is of fundamental importance in our understanding of the origins of biodiversity. Yet, most studies have focused on a single point along an evolutionary trajectory. Here, we provide a case study evaluating the strength of divergent selection acting on life-history traits at early-versus-late stages of divergence in Brachyrhaphis fishes. We find that the difference in selection is stronger in the early-diverged population than the late-diverged population, and that trait differences acquired early are maintained over time

    Model selection in ecology and evolution

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    Recently, researchers in several areas of ecology and evolution have begun to change the way in which they analyze data and make biological inferences. Rather than the traditional null hypothesis testing approach, they have adopted an approach called model selection, in which several competing hypotheses are simultaneously confronted with data. Model selection can be used to identify a single best model, thus lending support to one particular hypothesis, or it can be used to make inferences based on weighted support from a complete set of competing models. Model selection is widely accepted and well developed in certain fields, most notably in molecular systematics and mark– recapture analysis. However, it is now gaining support in several other areas, from molecular evolution to landscap

    Data from: Divergent natural selection promotes immigrant inviability at early and late stages of evolutionary divergence

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    Natural selection's role in speciation has been of fundamental importance since Darwin first outlined his theory. Recently, work has focused on understanding how selection drives trait divergence, and subsequently reproductive isolation. ‘Immigrant inviability’, a barrier that arises from selection against immigrants in their non-native environment, appears to be of particular importance. Although immigrant inviability is likely ubiquitous, we know relatively little about how selection acts on traits to drive immigrant inviability, and how important immigrant inviability is at early-versus-late stages of divergence. We present a study evaluating the role of predation in the evolution of immigrant inviability in recently-diverged population pairs and a well-established species pair of Brachyrhaphis fishes. We evaluate performance in a high-predation environment by assessing survival in the presence of a predator, and swimming endurance in a low-predation environment. We find strong signatures of local adaptation and immigrant inviability of roughly the same magnitude both early and late in divergence. We find remarkably conserved selection for burst-speed swimming (important in predator evasion), and selection for increased size in low-predation environments. Our results highlight the consistency with which selection acts during speciation, and suggest that similar factors might promote initial population differentiation and maintain differentiation at late stages of divergence

    Predator exposure alters female mate choice in the green swordtail

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    Female green swordtails, Xiphophorus helleri, show a mating preference for males with brightly colored, elongated swords. This preference is thought to be due to a preexisting receiver bias favoring longer sworded males. In this study, we examined variation in the expression of this sword bias in females. Specifically, we tested the hypothesis that an increase in perceived predation risk will decrease female response to males with longer swords. We used a video playback experiment to evaluate female choice between two recordings of a displaying male that differed only in sword length. We scored responses of females to these recordings immediately before and after they had been exposed to a video recording of a predation event between a cichlid and a male possessing a long sword. We found that prior to exposure to this predation event, females preferred the male with the longer sword. However, after exposure to the predator, females altered their mating response, preferring the male with the sword removed. Exposure to the predator also caused an increase in the frequency with which females moved from potential mating positions to a neutral zone. The results presented here suggest that the female preference for males with longer swords can be modulated based on the perceived risk of predation. Copyright 2003.
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