Environmental changes and the rise and fall of civilizations in the northern Horn of Africa: an approach combining δD analyses of land-plant derived fatty acids with multiple proxies in soil

International audienceThe domains of the ancient polities D'MT and Aksum in the Horn of Africa's highlands are a superior natural system for evaluating roles of environmental change on the rise and fall of civilizations. To compare environmental changes of the times of the two polities, we analyzed stable hydrogen isotopic ratios (δD) of land-plant derived fatty acids (n-C26-30) and other proxies from soil sequences spanning the Holocene from the region. Three results suggest that trends in δD values unambiguously reflect changes in rainfall. First, increases in δD coincide with dry periods inferred from studies of eastern African lakes. Second, changes in δD values were parallel among sections during overlapping time intervals. Third, consideration of vegetation history did not alter directions of trends in δD values over time. By unambiguously recording precipitation, the δD values also enhanced interpretations of proxies that are affected by both climate and land clearing. Both D'MT (ca 2750-2350 cal y BP) and the Aksumite (ca 2100-1250 cal y BP) rose during wetter intervals of the drier part of the Holocene (after ca 6000 cal y BP). Analyses of charred matter indicated that fire had been a common agent of land clearing in all sites. The influence of climate on fire varied, however. Prior to the emergence of D'MT, δD values were correlated with C4:C3 plant ratios estimated from δ13C values. There are no C4 trees and precipitation may have been the main influence on canopy openness. After ca 4300 cal y BP, there was no significant relationship between δD and C4:C3 plant ratios suggesting that factors such as fire influenced canopy openness regardless of climate. Furthermore, the impact of land clearance differed between sites and between D'MT and the Aksumite's times. In one site, the interval from 3550 cal y BP to the decline of D'MT had several anomalies that suggested dramatic increases in thermal severity of fire and human impact. Among these were a large contribution of charred matter to a high% total organic carbon that low hydrogen and oxygen indices suggest was severely altered by other factors than humification. These results support hypotheses about the rise of civilizations being favored by specific climatic conditions but suggest that patterns of land clearing differed during the declines of D'MT and the Aksumite

Chiral patterns arising from electrostatic growth models

Recently, unusual and strikingly beautiful seahorse-like growth patterns have been observed under conditions of quasi-two-dimensional growth. These `S'-shaped patterns strongly break two-dimensional inversion symmetry; however such broken symmetry occurs only at the level of overall morphology, as the clusters are formed from achiral molecules with an achiral unit cell. Here we describe a mechanism which gives rise to chiral growth morphologies without invoking microscopic chirality. This mechanism involves trapped electrostatic charge on the growing cluster, and the enhancement of growth in regions of large electric field. We illustrate the mechanism with a tree growth model, with a continuum model for the motion of the one-dimensional boundary, and with microscopic Monte Carlo simulations. Our most dramatic results are found using the continuum model, which strongly exhibits spontaneous chiral symmetry breaking, and in particular finned `S' shapes like those seen in the experiments.Comment: RevTeX, 12 pages, 9 figure

Covariant equations for the three-body bound state

The covariant spectator (or Gross) equations for the bound state of three identical spin 1/2 particles, in which two of the three interacting particles are always on shell, are developed and reduced to a form suitable for numerical solution. The equations are first written in operator form and compared to the Bethe-Salpeter equation, then expanded into plane wave momentum states, and finally expanded into partial waves using the three-body helicity formalism first introduced by Wick. In order to solve the equations, the two-body scattering amplitudes must be boosted from the overall three-body rest frame to their individual two-body rest frames, and all effects which arise from these boosts, including the Wigner rotations and rho-spin decomposition of the off-shell particle, are treated exactly. In their final form, the equations reduce to a coupled set of Faddeev-like double integral equations with additional channels arising from the negative rho-spin states of the off-shell particle.Comment: 57 pages, RevTeX, 6 figures, uses epsf.st

Gradual emergence of superconductivity in underdoped LSCO

We present triple-axis neutron scattering studies of low-energy magnetic fluctuations in strongly underdoped La$_{2-x}$Sr$_{x}$CuO$_{4}$ with $x=0.05$, $0.06$ and $0.07$, providing quantitative evidence for a direct competition between these fluctuations and superconductivity. At dopings $x=0.06$ and $x=0.07$, three-dimensional superconductivity is found, while only a very weak signature of two-dimensional superconductivity residing in the CuO$_2$ planes is detectable for $x=0.05$. We find a surprising suppression of the low-energy fluctuations by an external magnetic field at all three dopings. This implies that the response of two-dimensional superconductivity to a magnetic field is similar to that of a bulk superconductor. Our results provide direct evidence of a very gradual onset of superconductivity in cuprates.Comment: 5 pages, 4 figures, and supplementary materia

ProDiGe: Prioritization Of Disease Genes with multitask machine learning from positive and unlabeled examples

<p>Abstract</p> <p>Background</p> <p>Elucidating the genetic basis of human diseases is a central goal of genetics and molecular biology. While traditional linkage analysis and modern high-throughput techniques often provide long lists of tens or hundreds of disease gene candidates, the identification of disease genes among the candidates remains time-consuming and expensive. Efficient computational methods are therefore needed to prioritize genes within the list of candidates, by exploiting the wealth of information available about the genes in various databases.</p> <p>Results</p> <p>We propose ProDiGe, a novel algorithm for Prioritization of Disease Genes. ProDiGe implements a novel machine learning strategy based on learning from positive and unlabeled examples, which allows to integrate various sources of information about the genes, to share information about known disease genes across diseases, and to perform genome-wide searches for new disease genes. Experiments on real data show that ProDiGe outperforms state-of-the-art methods for the prioritization of genes in human diseases.</p> <p>Conclusions</p> <p>ProDiGe implements a new machine learning paradigm for gene prioritization, which could help the identification of new disease genes. It is freely available at <url>http://cbio.ensmp.fr/prodige</url>.</p

Evidence for H2 Dissociation and Recombination Heat Transport in the Atmosphere of KELT-9b

Phase curve observations provide an opportunity to study the energy budgets of exoplanets by quantifying the amount of heat redistributed from their daysides to their nightsides. Theories of phase curves for hot Jupiters have focused on the balance between radiation and dynamics as the primary parameter controlling heat redistribution. However, recent phase curves have shown deviations from the trends that emerge from this theory, which has led to work on additional processes that may affect hot Jupiter energy budgets. One such process, molecular hydrogen dissociation and recombination, can enhance energy redistribution on ultra-hot Jupiters with temperatures above similar to 2000 K. In order to study the impact of H-2 dissociation on ultra-hot Jupiters, we present a phase curve of KELT-9b observed with the Spitzer Space Telescope at 4.5 mu m. KELT-9b is the hottest known transiting planet, with a 4.5 mu m dayside brightness temperature of 5 sigma confidence. This discrepancy may be due to magnetic effects in the planet's highly ionized atmosphere.This item from the UA Faculty Publications collection is made available by the University of Arizona with support from the University of Arizona Libraries. If you have questions, please contact us at [email protected]

\u27Struggling with Language\u27 : Indigenous movements for Linguistic Security and the Politics of Local Community

In this article, I explore the relationship between linguistic diversity and political power. Specifically, I outline some of the ways that linguistic diversity has served as a barrier to the centralization of power, thus constraining, for example, the political practice of empire-formation. A brief historical example of this dynamic is presented in the case of Spanish colonialism of the 16th-century. The article proceeds then to demonstrate how linguistic diversity remains tied to struggles against forms of domination. I argue that in contemporary indigenous movements for linguistic security, the languages themselves are not merely conceived of as the object of the political struggle, but also as the means to preserve a space for local action and deliberation – a ‘politics of local community’. I show that linguistic diversity and the devolution of political power to the local level are in a mutually reinforcing relationship. Finally, I consider the implications of this thesis for liberal theorizing on language rights, arguing that such theory cannot fully come to terms with this political-strategic dimension of language struggles

Hijacking of the Pleiotropic Cytokine Interferon-γ by the Type III Secretion System of Yersinia pestis

Yersinia pestis, the causative agent of bubonic plague, employs its type III secretion system to inject toxins into target cells, a crucial step in infection establishment. LcrV is an essential component of the T3SS of Yersinia spp, and is able to associate at the tip of the secretion needle and take part in the translocation of anti-host effector proteins into the eukaryotic cell cytoplasm. Upon cell contact, LcrV is also released into the surrounding medium where it has been shown to block the normal inflammatory response, although details of this mechanism have remained elusive. In this work, we reveal a key aspect of the immunomodulatory function of LcrV by showing that it interacts directly and with nanomolar affinity with the inflammatory cytokine IFNγ. In addition, we generate specific IFNγ mutants that show decreased interaction capabilities towards LcrV, enabling us to map the interaction region to two basic C-terminal clusters of IFNγ. Lastly, we show that the LcrV-IFNγ interaction can be disrupted by a number of inhibitors, some of which display nanomolar affinity. This study thus not only identifies novel potential inhibitors that could be developed for the control of Yersinia-induced infection, but also highlights the diversity of the strategies used by Y. pestis to evade the immune system, with the hijacking of pleiotropic cytokines being a long-range mechanism that potentially plays a key role in the severity of plague

Orthostatic hypotension in young adults with and without posttraumatic stress disorder.

The purpose of this research is (1) to evaluate differences in orthostatic hypotension (OH) among young adults with and without posttraumatic stress disorder (PTSD) and (2) to examine whether group differences may be attributable to behavioral risk factors frequently associated with PTSD