The challenges of constraining shelf sea tidal models using seabed sediment grain size as a proxy for tidal currents

This is the final version. Available from Elsevier via the DOI in this record.Past major changes in sea level have had a significant influence on global- and shelf sea tidal dynamics. Some of these changes are preserved in sedimentary records from the shelf seas, and so appropriate proxy data have the potential to constrain tidal model outputs over the recent geological past. Tidal models which simulate the evolution of tide-dependent parameters over geological timescales are fundamental to understanding the response of the tides to sea-level rise and climate change. This study explores a potential new sedimentary proxy for validating past shelf sea tidal dynamics, interrogating the relationship between tidally-modulated bed shear stress and seabed sediment grain size at discrete sediment core locations over the northwest European shelf seas. Radiocarbon-dated sediment grain size profiles were generated for four British Geological Survey UK shelf sediment vibrocores, spanning a range of physical environments. Changes in observed sediment grain size through time were compared with simulated changes in tidal-induced bed shear through time, using temporal and spatial outputs from the most recently developed palaeotidal model of the Northwest European shelf seas. Although a positive correlation between observed grain size and simulated bed shear stress was observed at three of the four sediment cores sites, no robust relationship could be quantified. The palaeotidal model output failed to resolve the details of the actual sediment dynamics, since only tidal-induced bed shear stresses were considered. Wave processes were neglected, and the model was not sensitive enough to constrain simulated past tidal conditions at point locations; rather it is suitable for examining general trends. There remains a need to develop new proxies for past shelf sea hydrodynamic conditions which can be used to constrain numerical model output of tidal currents at regional scales.Natural Environment Research Council (NERC

Classifying seabed sediment type using simulated tidal-induced bed shear stress

This is the author accepted manuscript. The final version is freely available from Elsevier via the DOI in this record.An ability to estimate the large-scale spatial variability of seabed sediment type in the absence of extensive observational data is valuable for many applications. In some physical (e.g., morphodynamic) models, knowledge of seabed sediment type is important for inputting spatially-varying bed roughness, and in biological studies, an ability to estimate the distribution of seabed sediment benefits habitat mapping (e.g., scallop dredging). Although shelf sea sediment motion is complex, driven by a combination of tidal currents, waves, and wind-driven currents, in many tidally energetic seas, such as the Irish Sea, long-term seabed sediment transport is dominated by tidal currents. We compare observations of seabed sediment grain size from 242 Irish Sea seabed samples with simulated tidal-induced bed shear stress from a three-dimensional tidal model (ROMS) to quantitatively define the relationship between observed grain size and simulated bed shear stress. With focus on the median grain size of well-sorted seabed sediment samples, we present predictive maps of the distribution of seabed sediment classes in the Irish Sea, ranging from mud to gravel. When compared with the distribution of well-sorted sediment classifications (mud, sand and gravel) from the British Geological Survey digital seabed sediment map of Irish Sea sediments (DigSBS250), this 'grain size tidal current proxy' (GSTCP) correctly estimates the observed seabed sediment classification in over 73% of the area.Funding was provided by the Natural Environment Research Council (NERC) through grant NE/I527853/1 (Ph.D. studentship to SLW). The authors are grateful for access to the seabed sediment sample data and would like to acknowledge colleagues collecting and preparing these data through the projects HABMAP, SWISS, IMAGIN, ADFISH, and various projects led by the JNCC, as well as Hilmar Hinz, Lee Murray and Gwladys Lambert for work undertaken on a project funded by the Isle of Man Government (Department of Environment, Food and Agriculture). The author acknowledges modelling support from Patrick Timko and Reza Hashemi. The digital seabed sediment map (DigSBS250) was kindly made available by the BGS. The model simulations were undertaken on High Performance Computing (HPC) Wales, a collaboration between Welsh universities, the Welsh Government and Fujitsu

Sensitivity of palaeotidal models of the northwest European shelf seas to glacial isostatic adjustment since the Last Glacial Maximum

This is the final version of the article. Available from Elsevier via the DOI in this record.The spatial and temporal distribution of relative sea-level change over the northwest European shelf seas has varied considerably since the Last Glacial Maximum, due to eustatic sea-level rise and a complex isostatic response to deglaciation of both near- and far-field ice sheets. Because of the complex pattern of relative sea level changes, the region is an ideal focus for modelling the impact of significant sea-level change on shelf sea tidal dynamics. Changes in tidal dynamics influence tidal range, the location of tidal mixing fronts, dissipation of tidal energy, shelf sea biogeochemistry and sediment transport pathways. Significant advancements in glacial isostatic adjustment (GIA) modelling of the region have been made in recent years, and earlier palaeotidal models of the northwest European shelf seas were developed using output from less well-constrained GIA models as input to generate palaeobathymetric grids. We use the most up-to-date and well-constrained GIA model for the region as palaeotopographic input for a new high resolution, three-dimensional tidal model (ROMS) of the northwest European shelf seas. With focus on model output for 1 ka time slices from the Last Glacial Maximum (taken as being 21 ka BP) to present day, we demonstrate that spatial and temporal changes in simulated tidal dynamics are very sensitive to relative sea-level distribution. The new high resolution palaeotidal model is considered a significant improvement on previous depth-averaged palaeotidal models, in particular where the outputs are to be used in sediment transport studies, where consideration of the near-bed stress is critical, and for constraining sea level index points.Funding was provided by the Natural Environment Research Council through grant NE/I527853/1 (Ph.D. studentship to SLW). The author acknowledges modelling support from Patrick Timko and Reza Hashemi. The model simulations were undertaken on High Performance Computing (HPC) Wales, a collaboration between Welsh universities, the Welsh Government and Fujitsu Laboratories of Europe. The authors also thank one anonymous reviewer and Dayton Dove for their thoughtful comments, and thorough and constructive reviews

Type IIn supernovae at z ~ 2 from archival data

Supernovae have been confirmed to redshift z ~ 1.7 for type Ia (thermonuclear detonation of a white dwarf) and to z ~ 0.7 for type II (collapse of the core of the star). The subclass type IIn supernovae are luminous core-collapse explosions of massive stars and, unlike other types, are very bright in the ultraviolet, which should enable them to be found optically at redshifts z ~ 2 and higher. In addition, the interaction of the ejecta with circumstellar material creates strong, long-lived emission lines that allow spectroscopic confirmation of many events of this type at z ~ 2 for 3 - 5 years after explosion. Here we report three spectroscopically confirmed type IIn supernovae, at redshifts z = 0.808, 2.013 and 2.357, detected in archival data using a method designed to exploit these properties at z ~ 2. Type IIn supernovae directly probe the formation of massive stars at high redshift. The number found to date is consistent with the expectations of a locally measured stellar initial mass function, but not with an evolving initial mass function proposed to explain independent observations at low and high redshift.Comment: 8 pages, 2 figures, includes supplementary informatio

Early Ultraviolet Observations of Type IIn Supernovae Constrain the Asphericity of Their Circumstellar Material

© 2020. The American Astronomical Society. All rights reserved.. We present a survey of the early evolution of 12 Type IIn supernovae (SNe IIn) at ultraviolet and visible light wavelengths. We use this survey to constrain the geometry of the circumstellar material (CSM) surrounding SN IIn explosions, which may shed light on their progenitor diversity. In order to distinguish between aspherical and spherical CSM, we estimate the blackbody radius temporal evolution of the SNe IIn of our sample, following the method introduced by Soumagnac et al. We find that higher-luminosity objects tend to show evidence for aspherical CSM. Depending on whether this correlation is due to physical reasons or to some selection bias, we derive a lower limit between 35% and 66% for the fraction of SNe IIn showing evidence for aspherical CSM. This result suggests that asphericity of the CSM surrounding SNe IIn is common - consistent with data from resolved images of stars undergoing considerable mass loss. It should be taken into account for more realistic modeling of these events

An asymmetric explosion as the origin of spectral evolution diversity in type Ia supernovae

Type Ia Supernovae (SNe Ia) form an observationally uniform class of stellar explosions, in that more luminous objects have smaller decline-rates. This one-parameter behavior allows SNe Ia to be calibrated as cosmological `standard candles', and led to the discovery of an accelerating Universe. Recent investigations, however, have revealed that the true nature of SNe Ia is more complicated. Theoretically, it has been suggested that the initial thermonuclear sparks are ignited at an offset from the centre of the white-dwarf (WD) progenitor, possibly as a result of convection before the explosion. Observationally, the diversity seen in the spectral evolution of SNe Ia beyond the luminosity decline-rate relation is an unresolved issue. Here we report that the spectral diversity is a consequence of random directions from which an asymmetric explosion is viewed. Our findings suggest that the spectral evolution diversity is no longer a concern in using SNe Ia as cosmological standard candles. Furthermore, this indicates that ignition at an offset from the centre of is a generic feature of SNe Ia.Comment: To appear in Nature, 1st July 2010 issue. 36 pages including supplementary materials. 4 figures, 3 supplementary figures, 1 supplementary tabl

Identification and genome characterization of genotype B and genotype C bovine parainfluenza type 3 viruses isolated in the United States

BACKGROUND: Bovine parainfluenza 3 viruses (BPI3V) are respiratory pathogens of cattle that cause disease singly but are often associated with bovine respiratory disease complex (BRDC) in conjunction with other viral and bacterial agents. Bovine vaccines currently contain BPI3V to provide protection against the virus, but there is no current information regarding the BPI3V strains that are circulating in the U.S. RESULTS: A project was initiated to sequence archival BPI3V isolates to study viral evolution over time. This was done with a deep sequencing protocol that generated sequences of multiple RNA virus genomes simultaneously. Analysis of the BPI3V sequences revealed that, in addition to the genotype A (BPI3Va) viruses previously described in the United States, there were two additional genotypes of BPI3V circulating that had been described only in Australia (BPI3Vb) and Asia (BPI3Vc). The U.S. BPI3Vb and BPI3Vc isolates showed some divergence from the Australian and Asian strains; the BPI3Vb were 93 % similar to the Australian Q5592 strain and the BPI3Vc viruses were 98 % similar to the 12Q061 strain that was described in South Korea. Overall, the three genotypes were 82 to 84 % identical to each other and 80 % identical to the most similar human PI3V. Cross-neutralization studies using an APHIS/NVSL BPI3V reference serum showed that neutralization titers against the genotype B and C viruses were 4- to ≥16-fold less then the titer against the APHIS BPI3Va reference strain, SF-4. CONCLUSIONS: This study clearly demonstrated that BPI3Vb and BPI3Vc strains, previously thought to be foreign to the U.S., are indeed circulating in domestic livestock herds. Based on virus neutralization using polyclonal antisera, there were antigenic differences between viruses from these genotypes and the BPI3Va viruses that are included in currently marketed bovine vaccines. Further study of these viruses is warranted to determine pathogenic potential and cross-protection afforded by vaccination

Observational and Physical Classification of Supernovae

This chapter describes the current classification scheme of supernovae (SNe). This scheme has evolved over many decades and now includes numerous SN Types and sub-types. Many of these are universally recognized, while there are controversies regarding the definitions, membership and even the names of some sub-classes; we will try to review here the commonly-used nomenclature, noting the main variants when possible. SN Types are defined according to observational properties; mostly visible-light spectra near maximum light, as well as according to their photometric properties. However, a long-term goal of SN classification is to associate observationally-defined classes with specific physical explosive phenomena. We show here that this aspiration is now finally coming to fruition, and we establish the SN classification scheme upon direct observational evidence connecting SN groups with specific progenitor stars. Observationally, the broad class of Type II SNe contains objects showing strong spectroscopic signatures of hydrogen, while objects lacking such signatures are of Type I, which is further divided to numerous subclasses. Recently a class of super-luminous SNe (SLSNe, typically 10 times more luminous than standard events) has been identified, and it is discussed. We end this chapter by briefly describing a proposed alternative classification scheme that is inspired by the stellar classification system. This system presents our emerging physical understanding of SN explosions, while clearly separating robust observational properties from physical inferences that can be debated. This new system is quantitative, and naturally deals with events distributed along a continuum, rather than being strictly divided into discrete classes. Thus, it may be more suitable to the coming era where SN numbers will quickly expand from a few thousands to millions of events.Comment: Extended final draft of a chapter in the "SN Handbook". Comments most welcom

Effort-related functions of nucleus accumbens dopamine and associated forebrain circuits

Background Over the last several years, it has become apparent that there are critical problems with the hypothesis that brain dopamine (DA) systems, particularly in the nucleus accumbens, directly mediate the rewarding or primary motivational characteristics of natural stimuli such as food. Hypotheses related to DA function are undergoing a substantial restructuring, such that the classic emphasis on hedonia and primary reward is giving way to diverse lines of research that focus on aspects of instrumental learning, reward prediction, incentive motivation, and behavioral activation. Objective The present review discusses dopaminergic involvement in behavioral activation and, in particular, emphasizes the effort-related functions of nucleus accumbens DA and associated forebrain circuitry. Results The effects of accumbens DA depletions on food-seeking behavior are critically dependent upon the work requirements of the task. Lever pressing schedules that have minimal work requirements are largely unaffected by accumbens DA depletions, whereas reinforcement schedules that have high work (e.g., ratio) requirements are substantially impaired by accumbens DA depletions. Moreover, interference with accumbens DA transmission exerts a powerful influence over effort-related decision making. Rats with accumbens DA depletions reallocate their instrumental behavior away from food-reinforced tasks that have high response requirements, and instead, these rats select a less-effortful type of food-seeking behavior. Conclusions Along with prefrontal cortex and the amygdala, nucleus accumbens is a component of the brain circuitry regulating effort-related functions. Studies of the brain systems regulating effort-based processes may have implications for understanding drug abuse, as well as energy-related disorders such as psychomotor slowing, fatigue, or anergia in depression