FFT-LB modeling of thermal liquid-vapor systems

We further develop a thermal LB model for multiphase flows. In the improved model, we propose to use the FFT scheme to calculate both the convection term and external force term. The usage of FFT scheme is detailed and analyzed. By using the FFT algorithm spatiotemporal discretization errors are decreased dramatically and the conservation of total energy is much better preserved. A direct consequence of the improvement is that the unphysical spurious velocities at the interfacial regions can be damped to neglectable scale. Together with the better conservation of total energy, the more accurate flow velocities lead to the more accurate temperature field which determines the dynamical and final states of the system. With the new model, the phase diagram of the liquid-vapor system obtained from simulation is more consistent with that from theoretical calculation. Very sharp interfaces can be achieved. The accuracy of simulation results are also verified by the Laplace law. The FFT scheme can be easily applied to other models for multiphase flows.Comment: 34 pages, 21 figure

Hamiltonian type Lie bialgebras

We first prove that, for any generalized Hamiltonian type Lie algebra $L$, the first cohomology group $H^1(L,L \otimes L)$ is trivial. We then show that all Lie bialgebra structures on $L$ are triangular.Comment: LaTeX, 16 page

the fire assay reloaded

The fire assay process is still the most accurate and precise method for measuring the gold content in gold alloys. Scanning electron microscopy and transmission electron microscopy have been applied to observe the change in microstructure of the samples undergoing the fire assay process. The performed observations reveal that the microstructure of the specimen is more complex than expected. Before the parting stage, the specimen is not a perfect gold–silver binary alloy but contains also copper–silver oxides and other residual compounds. The parting stage appears to be a dealloying process leading to a nanoporous gold nanostructure. What observed after partition explains the evolution of the shape and colour of the specimen and may allow for a better comprehension of the procedure and an improvement in the method

Integrative analyses of transcriptome sequencing identify novel functional lncRNAs in esophageal squamous cell carcinoma.

Long non-coding RNAs (lncRNAs) have a critical role in cancer initiation and progression, and thus may mediate oncogenic or tumor suppressing effects, as well as be a new class of cancer therapeutic targets. We performed high-throughput sequencing of RNA (RNA-seq) to investigate the expression level of lncRNAs and protein-coding genes in 30 esophageal samples, comprised of 15 esophageal squamous cell carcinoma (ESCC) samples and their 15 paired non-tumor tissues. We further developed an integrative bioinformatics method, denoted URW-LPE, to identify key functional lncRNAs that regulate expression of downstream protein-coding genes in ESCC. A number of known onco-lncRNA and many putative novel ones were effectively identified by URW-LPE. Importantly, we identified lncRNA625 as a novel regulator of ESCC cell proliferation, invasion and migration. ESCC patients with high lncRNA625 expression had significantly shorter survival time than those with low expression. LncRNA625 also showed specific prognostic value for patients with metastatic ESCC. Finally, we identified E1A-binding protein p300 (EP300) as a downstream executor of lncRNA625-induced transcriptional responses. These findings establish a catalog of novel cancer-associated functional lncRNAs, which will promote our understanding of lncRNA-mediated regulation in this malignancy

Block of NMDA receptor channels by endogenous neurosteroids: implications for the agonist induced conformational states of the channel vestibule

N-methyl-D-aspartate receptors (NMDARs) mediate synaptic plasticity, and their dysfunction is implicated in multiple brain disorders. NMDARs can be allosterically modulated by numerous compounds, including endogenous neurosteroid pregnanolone sulfate. Here, we identify the molecular basis of the use-dependent and voltage-independent inhibitory effect of neurosteroids on NMDAR responses. The site of action is located at the extracellular vestibule of the receptor's ion channel pore and is accessible after receptor activation. Mutations in the extracellular vestibule in the SYTANLAAF motif disrupt the inhibitory effect of negatively charged steroids. In contrast, positively charged steroids inhibit mutated NMDAR responses in a voltage-dependent manner. These results, in combination with molecular modeling, characterize structure details of the open configuration of the NMDAR channel. Our results provide a unique opportunity for the development of new therapeutic neurosteroid-based ligands to treat diseases associated with dysfunction of the glutamate system

1RXS J232953.9+062814: a New SU UMa Dwarf Nova below the Period Minimum

1RXS J232953.9+062814 was identified as a cataclysmic variable by Wei et al. (1999). Four low-resolution spectra of 1RXS J232953.9+062814 were obtained by using the 2.16-m telescope of the National Astronomical Observatories, in which two of them were at outburst, and the other two were at quiescence. The system is about 16.8 B and 16.5 V at quiescence, and 12.6 B and 12.6 V at outburst. The quiescent spectra were dominated by double-peaked Balmer emissions, which indicates a hydrogen-rich system with a high-inclination accretion disc. MgH and TiO absorption bands appeared in the quiescent spectrum imply a companion with a spectral type of early M dwarf. If we take it as a M0 dwarf, the system is located at a distance of 350 pc with a proper motion velocity 150 km s$^{-1}$. The superhump period of 0.046311 days (Uemura et al. 2001) was confirmed by our V photometry. The short period and the hydrogen-rich nature reveal that this system is another SU Ursae Majoris-type dwarf nova below the period minimum after V485 Centauri. 1RXS J232953.9+062814 is one of the most important systems for studying the evolutionary scenario of cataclysmic variables since it is much brighter than V485 Cen.Comment: 4 pages, 2 figures, accepted by Chin. J. Astron. Astrophy

Hierarchical information clustering by means of topologically embedded graphs

We introduce a graph-theoretic approach to extract clusters and hierarchies in complex data-sets in an unsupervised and deterministic manner, without the use of any prior information. This is achieved by building topologically embedded networks containing the subset of most significant links and analyzing the network structure. For a planar embedding, this method provides both the intra-cluster hierarchy, which describes the way clusters are composed, and the inter-cluster hierarchy which describes how clusters gather together. We discuss performance, robustness and reliability of this method by first investigating several artificial data-sets, finding that it can outperform significantly other established approaches. Then we show that our method can successfully differentiate meaningful clusters and hierarchies in a variety of real data-sets. In particular, we find that the application to gene expression patterns of lymphoma samples uncovers biologically significant groups of genes which play key-roles in diagnosis, prognosis and treatment of some of the most relevant human lymphoid malignancies.Comment: 33 Pages, 18 Figures, 5 Table

Full coherent control of nuclear spins in an optically pumped single quantum dot

Highly polarized nuclear spins within a semiconductor quantum dot (QD) induce effective magnetic (Overhauser) fields of up to several Tesla acting on the electron spin or up to a few hundred mT for the hole spin. Recently this has been recognized as a resource for intrinsic control of QD-based spin quantum bits. However, only static long-lived Overhauser fields could be used. Here we demonstrate fast redirection on the microsecond time-scale of Overhauser fields of the order of 0.5 T experienced by a single electron spin in an optically pumped GaAs quantum dot. This has been achieved using full coherent control of an ensemble of 10^3-10^4 optically polarized nuclear spins by sequences of short radio-frequency (rf) pulses. These results open the way to a new class of experiments using rf techniques to achieve highly-correlated nuclear spins in quantum dots, such as adiabatic demagnetization in the rotating frame leading to sub-micro K nuclear spin temperatures, rapid adiabatic passage, and spin squeezing

The Mitochondrial Ca(2+) Uniporter: Structure, Function, and Pharmacology.

Mitochondrial Ca(2+) uptake is crucial for an array of cellular functions while an imbalance can elicit cell death. In this chapter, we briefly reviewed the various modes of mitochondrial Ca(2+) uptake and our current understanding of mitochondrial Ca(2+) homeostasis in regards to cell physiology and pathophysiology. Further, this chapter focuses on the molecular identities, intracellular regulators as well as the pharmacology of mitochondrial Ca(2+) uniporter complex