Femtosecond spectral and anisotropy study of excitation energy transfer between neighbouring α-80 and β-81 chromophores of allophycocyanin trimers

Polarization pump-probe femtosecond spectroscopy was used to investigate photoinduced optical density changes in allophycocyanin (APC) trimers at 635–690 nm after excitation with 230-fs pulses at 618 nm. The initial bleaching observed at λ < 645 nm is followed by subpicosecond absorption recovery corresponding to 430 ± 40 fs recovery kinetics measured at 615 nm with 70-fs pulses. Only the red part of the APC absorption band remains strongly bleached at 3 ps after excitation. The spectral and kinetic results can be described in terms of two different models of interaction between neighbouring α-80 and β-81 chromophores of APC trimers. According to the first one, the observed subpicosecond kinetics corresponds to relaxation between the levels of excitonically coupled, spectrally identical α-80 and β-81 chromophores. Excited state absorption to doubly excited excitonic state should in this case contribute to the measured difference spectra. According to the second one, the femtosecond excitation energy transfer in APC trimers takes place between a donor chromophore absorbing predominantly at 620 nm and an acceptor chromophore absorbing at 650 nm. The high anisotropy value observed at 615 nm during the first 1.2 ps is in good agreement with the donor-acceptor model. Anisotropy values calculated in the 635–675 nm spectral region at 3 ps after excitation are in the 0.1–0.25 range corresponding to an angle of 30°–45° between donor and acceptor transition dipole orientations. The high anisotropy obtained at 658 nm during the excitation is probably due to stimulated emission of the donor chromophore

Förster energy transfer between neighbouring chromophores in C-phycocyanin trimers

The excitation-energy transfer in C-phycocyanin (C-PC) trimers and monomers isolated from phycobilisomes of Mastigocladus laminosus has been studied by polarization femtosecond laser spectroscopy. Excitation with 70-fs pulses at 615 nm gave rise to a 500-fs energy-transfer process that was observed only in trimeric preparations. The rate of the process is in agreement with earlier calculated Förster energy transfer rates between neighbouring α-84 and β-84 chromophores of different monomeric subunits. This process is most clearly seen in the anisotropy decay kinetics. As a result of femtosecond excitation-energy transfer, the anisotropy relaxes from 0.4 to 0.23. The final anisotropy value is in fair agreement with the results of calculations based on the crystal structure and spectroscopic data of C-PC trimers. Our results support the conclusion that Förster energy transfer can occur between excitonically coupled chromophores

Rare and low-frequency coding variants alter human adult height

Height is a highly heritable, classic polygenic trait with ~700 common associated variants identified so far through genome - wide association studies . Here , we report 83 height - associated coding variants with lower minor allele frequenc ies ( range of 0.1 - 4.8% ) and effects of up to 2 16 cm /allele ( e.g. in IHH , STC2 , AR and CRISPLD2 ) , >10 times the average effect of common variants . In functional follow - up studies, rare height - increasing alleles of STC2 (+1 - 2 cm/allele) compromise d proteolytic inhibition of PAPP - A and increased cleavage of IGFBP - 4 in vitro , resulting in higher bioavailability of insulin - like growth factors . The se 83 height - associated variants overlap genes mutated in monogenic growth disorders and highlight new biological candidates ( e.g. ADAMTS3, IL11RA, NOX4 ) and pathways ( e.g . proteoglycan/ glycosaminoglycan synthesis ) involved in growth . Our results demonstrate that sufficiently large sample sizes can uncover rare and low - frequency variants of moderate to large effect associated with polygenic human phenotypes , and that these variants implicate relevant genes and pathways

Grid Adaptation For Gas Dynamic And Astrophysical Flows

Numerical grid adaptation method for finite volume methods is presented. Unlike traditional adaptation methods, the method presented moves vertices of control volumes instead of their centers. To perform such movement, geometric information is used generated for the control volume method. The presented method can be used for two- and three-dimensional grids of arbitrary structure. Possibilities and limitations of the grid adaptation method are shown by various examples. Keywords: mesh adaptation, control volume method, structural 1. INTRODUCTION An important peculiarity of the most of grid adaptation methods is their orientation on finite-difference meshes. On one hand, this decreases the amount of information necessary for adaptation (we need only the coordinates of points and the function values at them). On the other hand, this can result in the increase of the computational time for recalculation of additional geometric information. This can even result in the break of approxima..

Experimental and Numerical Investigation of a Surface Sliding Discharge in a Supersonic Flow with an Oblique Shock Wave

This study presents an experimental and numerical investigation on a surface sliding discharge in a supersonic airflow in the presence of an oblique shock wave. In experiments, flow Mach numbers were 1.20&ndash;1.68 in the shock tube combined with the discharge chamber. A single high-voltage 25 kV pulse sustains the plasma; the discharge current has a duration of ~500 ns. A surface sliding discharge is developed as a localized channel in a zone of interaction of an oblique shock wave with a boundary layer on the upper wall of the discharge chamber. The discharge channel acts as a linear source of heat and is at the origin of the induced shock wave. The flow field in the discharge chamber is spatio-temporally surveyed using high-speed shadowgraphy imaging with a frequency of up to 525,000 frames per second. The experiments show that the perturbed flow restored the initial structure after more than 100 &mu;s. Numerical simulation with local energy input into the supersonic flow in a flat channel is carried out on the base of unsteady two-dimensional Navier&ndash;Stokes equations. It is determined that the dynamics of an induced shock wave are dependent on the energy input regime and on the flow parameters. The thermal energy release in the discharge channel of 0.22&ndash;0.29 J was estimated from a comparison of experimental data and numerical simulations

Experimental Setup for Studying the Capture of Sulfur and Nitrogen Oxides from Flue Gases

The pilot unit is developed for adaptation of the absorptive mathematical model in a scrubber of the Venturi on a finding of factors of phase equilibrium by algorithm working off in the absorptive processes of extraction SO2 on water. The technique of work by test tests of trapping CO2 for water which have shown adequate work of a scrubber of the Venturi in the cascade with a spray separator-cyclone separator is completed

Experimental Setup for Studying the Capture of Sulfur and Nitrogen Oxides from Flue Gases

The pilot unit is developed for adaptation of the absorptive mathematical model in a scrubber of the Venturi on a finding of factors of phase equilibrium by algorithm working off in the absorptive processes of extraction SO2 on water. The technique of work by test tests of trapping CO2 for water which have shown adequate work of a scrubber of the Venturi in the cascade with a spray separator-cyclone separator is completed

Effect of Carbon Dots Concentration on Electrical and Optical Properties of Their Composites with a Conducting Polymer

CQD/PEDOT:PSS composites were prepared via the hydrothermal method from glucose carbon quantum dots (CQDs) and an aqueous solution of PEDOT:PSS conducting polymer and their electrical and optical properties were investigated. The morphology and structure of these samples were investigated by AFM, SEM, EDX, and EBSD. It was found that the CQDs and CQD/PEDOT:PSS composites had a globular structure with globule sizes of ~50–300 nm depending on the concentration of PEDOT:PSS in these composites. The temperature dependence of the resistivity was obtained for the CQD/PEDOT:PSS (3%, 5%, 50%) composites, which had a weak activation character. The charge transport mechanism was discussed. The dependence of the resistivity on the storage time of the CQD/PEDOT:PSS (3%, 5%, 50%) composites and pure PEDOT:PSS was obtained. It was noted that mixing CQDs with PEDOT:PSS allowed us to obtain better electrical and optical properties than pure CQDs. CQD/PEDOT:PSS (3%, 5%, 50%) composites are more conductive composites than pure CQDs, and the absorbance spectra of CQD/PEDOT:PSS composites are a synergistic effect of interaction between CQDs and PEDOT:PSS. We also note the better stability of the CQD/PEDOT:PSS (50%) composite than the pure PEDOT:PSS film. CQD/PEDOT:PSS (50%) composite is promising for use as stable hole transport layers in devices of flexible organic electronics