Phytoplankton responses to marine climate change – an introduction

Phytoplankton are one of the key players in the ocean and contribute approximately 50% to global primary production. They serve as the basis for marine food webs, drive chemical composition of the global atmosphere and thereby climate. Seasonal environmental changes and nutrient availability naturally influence phytoplankton species composition. Since the industrial era, anthropogenic climatic influences have increased noticeably – also within the ocean. Our changing climate, however, affects the composition of phytoplankton species composition on a long-term basis and requires the organisms to adapt to this changing environment, influencing micronutrient bioavailability and other biogeochemical parameters. At the same time, phytoplankton themselves can influence the climate with their responses to environmental changes. Due to its key role, phytoplankton has been of interest in marine sciences for quite some time and there are several methodical approaches implemented in oceanographic sciences. There are ongoing attempts to improve predictions and to close gaps in the understanding of this sensitive ecological system and its responses

The colonization of two Phaeocystis species (Prymnesiophyceae) by pinnate diatoms and others protests: a significant contribution to colony biomass.

International audienc

Genome variations associated with viral susceptibility and calcification in Emiliania huxleyi

Emiliania huxleyi, a key player in the global carbon cycle is one of the best studied coccolithophores with respect to biogeochemical cycles, climatology, and host-virus interactions. Strains of E. huxleyi show phenotypic plasticity regarding growth behaviour, light-response, calcification, acidification, and virus susceptibility. This phenomenon is likely a consequence of genomic differences, or transcriptomic responses, to environmental conditions or threats such as viral infections. We used an E. huxleyi genome microarray based on the sequenced strain CCMP1516 (reference strain) to perform comparative genomic hybridizations (CGH) of 16 E. huxleyi strains of different geographic origin. We investigated the genomic diversity and plasticity and focused on the identification of genes related to virus susceptibility and coccolith production (calcification). Among the tested 31940 gene models a core genome of 14628 genes was identified by hybridization among 16 E. huxleyi strains. 224 probes were characterized as specific for the reference strain CCMP1516. Compared to the sequenced E. huxleyi strain CCMP1516 variation in gene content of up to 30 percent among strains was observed. Comparison of core and non-core transcripts sets in terms of annotated functions reveals a broad, almost equal functional coverage over all KOG-categories of both transcript sets within the whole annotated genome. Within the variable (non-core) genome we identified genes associated with virus susceptibility and calcification. Genes associated with virus susceptibility include a Bax inhibitor-1 protein, three LRR receptor-like protein kinases, and mitogen-activated protein kinase. Our list of transcripts associated with coccolith production will stimulate further research, e.g. by genetic manipulation. In particular, the V-type proton ATPase 16 kDa proteolipid subunit is proposed to be a plausible target gene for further calcification studies

Western Arctic primary productivity regulated by shelf-break warm eddies

The response of phytoplankton to the Beaufort shelf-break eddies in the western Arctic Ocean is examined using the eddy-resolving coupled sea ice–ocean model including a lower-trophic marine ecosystem formulation. The regional model driven by the reanalysis 2003 atmospheric forcing from March to November captures the major spatial and temporal features of phytoplankton bloom following summertime sea ice retreat in the shallow Chukchi shelf and Barrow Canyon. The shelf-break warm eddies spawned north of the Barrow Canyon initially transport the Chukchi shelf water with high primary productivity toward the Canada Basin interior. In the eddy-developing period, the anti-cyclonic rotational flow along the outer edge of each eddy moving offshore occasionally traps the shelf water. The primary production inside the warm eddies is maintained by internal dynamics in the eddy-maturity period. In particular, the surface central area of an anti-cyclonic eddy acquires adequate light, nutrient, and warm environment for photosynthetic activity partly attributed to turbulent mixing with underlying nutrient-rich water. The simulated biogeochemical properties with the dominance of small-size phytoplankton inside the warm eddies are consistent with the observational findings in the western Arctic Ocean. It is also suggested that the light limitation before autumn sea ice freezing shuts down the primary production in the shelf-break eddies in spite of nutrient recovery. These results indicate that the time lag between the phytoplankton bloom in the shelf region following the summertime sea ice retreat and the eddy generation along the Beaufort shelf break is an important index to determine biological regimes in the Canada Basin