Zeolitization of Tuffaceous Rocks in the Kesan Region, Thrace, Turkey

A 33 metre thick pyroclastic-rich zone of the Mezardere formation of Oligocene age is exposed in the Kesan region of Thrace, Turkey. In this zone, vitreous tuffs of dacitic composition have altered primarily to zeolites, including mordenite, heulandite–clinoptilolite and analcime. Silicification and alteration to clay minerals are common. Zeolite minerals have developed from volcanic glass, whereas some mordenites have formed from dissolution of heulandite-group zeolites. Although authigenic mineral paragenesis does not vary laterally, there is a marked vertical variation, particularly in zeolites. Mordenite (+heulandite–clinoptilolite) and analcime do not coexist and have formed in different stratigraphic levels. This suggests that their chemical environment is controlled by different hydrologic systems. Whole rock composition shows the relationship between chemistry and secondary mineralogy. For example, whole rock trace element geochemistry indicates the natural selectivities of zeolites. There is also stratigraphic control on the chemistry and texture of mordenites. Specifically, (Na+K)/(Ca+Mg) ratios of mordenites decrease from the lower to the upper levels. Mordenites of the lower level show a fibrous habit while the upper level mordenites are needle-like in shape. The average Si/Al ratio in mordenites is 3.90, in heulandite-group minerals 3.95, and in analcimes 2.34

Functional assessment for clinical use of serum-free adapted NK-92 cells

Natural killer (NK) cells stand out as promising candidates for cellular immunotherapy due to their capacity to kill malignant cells. However, the therapeutic use of NK cells is often dependent on cell expansion and activation with considerable amounts of serum and exogenous cytokines. We aimed to develop an expansion protocol for NK-92 cells in an effort to generate a cost-efficient, xeno-free, clinical grade manufactured master cell line for therapeutic applications. By making functional assays with NK-92 cells cultured under serum-free conditions (NK-92(SF)) and comparing to serum-supplemented NK-92 cells (NK-92(S)) we did not observe significant alterations in the viability, proliferation, receptor expression levels, or in perforin and granzyme levels. Interestingly, even though NK-92(SF) cells displayed decreased degranulation and cytotoxicity against tumor cells in vitro, the degranulation capacity was recovered after overnight incubation with 20% serum in the medium. Moreover, lentiviral vector-based genetic modification efficiency of NK-92(SF) cells was comparable with NK-92(S) cells. The application of similar strategies can be useful in reducing the costs of manufacturing cells for clinical use and can help us understand and implement strategies towards chemically defined expansion and genetic modification protocols

Exhaled carbon monoxide in asthmatics: a meta-analysis

<p>Abstract</p> <p>Background</p> <p>The non-invasive assessment of airway inflammation is potentially advantageous in asthma management. Exhaled carbon monoxide (eCO) measurement is cheap and has been proposed to reflect airway inflammation and oxidative stress but current data are conflicting. The purpose of this meta-analysis is to determine whether eCO is elevated in asthmatics, is regulated by steroid treatment and reflects disease severity and control.</p> <p>Methods</p> <p>A systematic search for English language articles published between 1997 and 2009 was performed using Medline, Embase and Cochrane databases. Observational studies comparing eCO in non-smoking asthmatics and healthy subjects or asthmatics before and after steroid treatment were included. Data were independently extracted by two investigators and analyzed to generate weighted mean differences using either a fixed or random effects meta-analysis depending upon the degree of heterogeneity.</p> <p>Results</p> <p>18 studies were included in the meta-analysis. The eCO level was significantly higher in asthmatics as compared to healthy subjects and in intermittent asthma as compared to persistent asthma. However, eCO could not distinguish between steroid-treated asthmatics and steroid-free patients nor separate controlled and partly-controlled asthma from uncontrolled asthma in cross-sectional studies. In contrast, eCO was significantly reduced following a course of corticosteroid treatment.</p> <p>Conclusions</p> <p>eCO is elevated in asthmatics but levels only partially reflect disease severity and control. eCO might be a potentially useful non-invasive biomarker of airway inflammation and oxidative stress in nonsmoking asthmatics.</p

Transcriptomes and expression profiling of deep-sea corals from the Red Sea provide insight into the biology of azooxanthellate corals

Despite the importance of deep-sea corals, our current understanding of their ecology and evolutionis limited due to difficulties in sampling and studying deep-sea environments. Moreover, a recent reevaluation of habitat limitations has been suggested after characterization of deep-sea corals in the Red Sea, where they live at temperatures of above 20 °C at low oxygen concentrations. To gain further insight into the biology of deep-sea corals, we produced reference transcriptomes and studied gene expression of three deep-sea coral species from the Red Sea, i.e. Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. Our analyses suggest that deep-sea coral employ mitochondrial hypometabolism and anaerobic glycolysis to manage low oxygen conditions present in the Red Sea. Notably, we found expression of genes related to surface cilia motion that presumably enhance small particle transport rates in the oligotrophic deep-sea environment. This is the first study to characterize transcriptomes and in situ gene expression for deep-sea corals. Our work offers several mechanisms by which deep-sea corals might cope with the distinct environmental conditions present in the Red Sea. As such, our data provides direction for future research and further insight to organismal response of deep sea coral to environmental change and ocean warming.Tis work was supported by King Abdullah University of Science and Technology (KAUST), baseline funds to CRV and Center Competitive Funding (CCF) Program FCC/1/1973-18-01

Surfactant replacement and open lung concept – Comparison of two treatment strategies in an experimental model of neonatal ARDS

Background: Several concepts of treatment in neonatal ARDS have been proposed in the last years. The present study compared the effects of open lung concept positive pressure ventilation (PPVOLC) with a conventional ventilation strategy combined with administration of two different surfactant preparations on lung function and surfactant homoeostasis. Methods: After repeated whole-lung saline lavage, 16 newborn piglets were assigned to either PPVOLC(n = 5) or surfactant treatment under conventional PPV using a natural bovine (n = 5) or a monomeric protein B based surfactant (n = 6). Results: Comprehensive monitoring showed each treatment strategy to improve gas exchange and lung function, although the effect on PaO2and pulmonary compliance declined over the study period in the surfactant groups. The overall improvement of the ventilation efficiency index (VEI) was significantly greater in the PPVOLCgroup. Phospholipid and protein analyses of the bronchoalveolar lavage fluid showed significant alterations to surfactant homoeostasis in the PPVOLCgroup, whereas IL-10 and SP-C mRNA expression was tendentially increased in the surfactant groups. Conclusion: The different treatment strategies applied could be shown to improve gas exchange and lung function in neonatal ARDS. To which extent differences in maintenance of lung function and surfactant homeostasis may lead to long-term consequences needs to be studied further

Illite occurrences related to volcanic-hosted hydrothermal mineralization in the biga peninsula, NW Turkey: Implications for the age and origin of fluids

A different approach to investigate the origin of fluids, temperature conditions, age of hydrothermal activity of mineralization in the Biga Peninsula, (Koru, Tesbihdere and Kumarlar) employed mineralogical (illite Kübler index, b cell dimension, polytype) and geochemical (major, trace/REE, O-H stable isotope and Rb/Sr dating) methods. The Kübler Index (KI) values of illites indicate different temperature conditions, such as low temperature (high-grade diagenesis) for Koru deposit, and high temperature (anchizone) for the Tesbihdere and Kumarlar deposits. The textural, mineralogical and geochemical data from illites show that these have potential for estimating the age of hydrothermal activity and fluid characteristics. Both mineralogical (high grade diagenetic to anchizonal KI, 1 M polytype, low d060 values) and geochemical (similar major and trace element composition to host-rocks, low octahedral Mg + Fe contents, oxygen and hydrogen isotope composition) data are compatible with commonly known hydrothermal illites. Stable isotope data of illites are well matched to similar data from fluid inclusions, which indicate mainly magmatic fluids. The Rb/Sr age (22.4 ± 2.3 Ma: latest Oligocene and lowest Miocene) of the illites coincides with plutonic intrusions that are the main instigators of hydrothermal activities related to the extensional tectonic regime in the Biga Peninsula. The mineralogical and geochemical data of illites have some important advantages with respect to the use of fluid inclusions in determining δD of hydrothermal fluids thereby leading to better understanding ore-forming hydrothermal condition

Particulate Matter-Induced Lung Inflammation Increases Systemic Levels of PAI-1 and Activates Coagulation Through Distinct Mechanisms

Exposure of human populations to ambient particulate matter (PM) air pollution significantly contributes to the mortality attributable to ischemic cardiovascular events. We reported that mice treated with intratracheally instilled PM develop a prothrombotic state that requires the release of IL-6 by alveolar macrophages. We sought to determine whether exposure of mice to PM increases the levels of PAI-1, a major regulator of thrombolysis, via a similar or distinct mechanism. mice but was absent in mice treated with etanercept, a TNF-α inhibitor. Treatment with etanercept did not prevent the PM-induced tendency toward thrombus formation.Mice exposed to inhaled PM exhibited a TNF-α-dependent increase in PAI-1 and an IL-6-dependent activation of coagulation. These results suggest that multiple mechanisms link PM-induced lung inflammation with the development of a prothrombotic state