Intestinal Microbial Ecology of Broilers Vaccinated and Challenged With Mixed Eimeria Species, and Supplemented with Essential Oil Blends

Intestinal microbiota is an important component in the development of defense mechanisms in the gut mucosa. This project determined the dynamics of intestinal microbial communities (MC) of broilers vaccinated at first day of age with live oocysts of Eimeria species and fed diets supplemented with 2 specific essential oil (EO) blends, Crina Poultry (CP) and Crina Alternate (CA). Five treatments were analyzed: 1) unmedicated-uninfected (UU) control; 2) unmedicated-infected (UI) control; 3) vaccinated with Advent cocci-vaccine and without feed additive (COV) supplements; 4) vaccinated with Advent and supplemented with CP; and 5) vaccinated with Advent and supplemented with CA. The EO blends were added at 100 ppm to the same basal diets. Chicks were gavage-infected at 19 d of age with Eimeria acervulina, Eimeria maxima, and Eimeria tenella. Duodenal, ileal, and cecal samples were taken from 12 birds per treatment just before the infection and 7 d after the challenge, pooled in 6 samples, and frozen. Denaturing gradient gel electrophoresis was used to examine PCR-amplified fragments of the bacterial 16S ribosomal DNA variable region. Results are presented as percentages of similarity coefficients (SC). Dendrograms of amplicon patterns indicated MC differences due to intestinal location, feed additives, and cocci infection. The EO blends CP and CA did affect MC in all gut sections. The cocci-infection caused drastic MC population shifts in duodenal, ileal, and cecal sections (36.7, 55.4, and 36.2% SC, respectively). The CP-supplemented birds had higher SC between pre- and postchallenge MC in duodenal and ileal (73.3, 81.8%) than COV (66.4, 66.5%). However, COV broilers had the smallest changes in cecal MC after infection (79.5% SC). We concluded that cocci-vaccination causes small changes in intestinal MC, but challenge causes drastic shifts. The EO blend supplementation modulates MC in cocci-vaccinated broilers, avoiding drastic shifts after a mixed coccidia infection. Correlations between MC dynamics and host responses are discussed

From Non-human to Human: Adult's and Children's Perceptions of Agents Varying in Humanness

While most interface agents have been designed from an adult perspective, the present paper compares adults’ and children’s views of agents that vary in their degree of humanness. Four synthetic characters ranging in appearance from non-human to very human (blob, cat, cartoon, human) were presented to adult and children perceivers and were evaluated with respect to their cognitive and emotional abilities. The visual appearance significantly influenced participants’ ratings in both age groups. However, the pattern of results was more differentiated for adult perceivers as a function of the human-likeness of the character. The findings suggest that children may rely less on human-like features in inferring agents’ capabilities which are judged along simpler cognitive and social dimensions. Implications for the design of artificial agents are discussed

Plants regenerated from tissue culture contain stable epigenome changes in rice.

Most transgenic crops are produced through tissue culture. The impact of utilizing such methods on the plant epigenome is poorly understood. Here we generated whole-genome, single-nucleotide resolution maps of DNA methylation in several regenerated rice lines. We found that all tested regenerated plants had significant losses of methylation compared to non-regenerated plants. Loss of methylation was largely stable across generations, and certain sites in the genome were particularly susceptible to loss of methylation. Loss of methylation at promoters was associated with deregulated expression of protein-coding genes. Analyses of callus and untransformed plants regenerated from callus indicated that loss of methylation is stochastically induced at the tissue culture step. These changes in methylation may explain a component of somaclonal variation, a phenomenon in which plants derived from tissue culture manifest phenotypic variability. DOI:http://dx.doi.org/10.7554/eLife.00354.001

Selective deletion of cochlear hair cells causes rapid age-dependent changes in spiral ganglion and cochlear nucleus neurons

During nervous system development, critical periods are usually defined as early periods during which manipulations dramatically change neuronal structure or function, whereas the same manipulations in mature animals have little or no effect on the same property. Neurons in the ventral cochlear nucleus (CN) are dependent on excitatory afferent input for survival during a critical period of development. Cochlear removal in young mammals and birds results in rapid death of target neurons in the CN. Cochlear removal in older animals results in little or no neuron death. However, the extent to which hair-cell-specific afferent activity prevents neuronal death in the neonatal brain is unknown. We further explore this phenomenon using a new mouse model that allows temporal control of cochlear hair cell deletion. Hair cells express the human diphtheria toxin (DT) receptor behind the Pou4f3 promoter. Injections of DT resulted in nearly complete loss of organ of Corti hair cells within 1 week of injection regardless of the age of injection. Injection of DT did not influence surrounding supporting cells directly in the sensory epithelium or spiral ganglion neurons (SGNs). Loss of hair cells in neonates resulted in rapid and profound neuronal loss in the ventral CN, but not when hair cells were eliminated at a more mature age. In addition, normal survival of SGNs was dependent on hair cell integrity early in development and less so in mature animals. This defines a previously undocumented critical period for SGN survival

Novel use Of Hydroxyurea in an African Region with Malaria (NOHARM): a trial for children with sickle cell anemia

Hydroxyurea treatment is recommended for children with sickle cell anemia (SCA) living in high-resource malaria-free regions, but its safety and efficacy in malaria-endemic sub-Saharan Africa, where the greatest sickle-cell burden exists, remain unknown. In vitro studies suggest hydroxyurea could increase malaria severity, and hydroxyurea-associated neutropenia could worsen infections. NOHARM (Novel use Of Hydroxyurea in an African Region with Malaria) was a randomized, double-blinded, placebo-controlled trial conducted in malaria-endemic Uganda, comparing hydroxyurea to placebo at 20 ± 2.5 mg/kg per day for 12 months. The primary outcome was incidence of clinical malaria. Secondary outcomes included SCA-related adverse events (AEs), clinical and laboratory effects, and hematological toxicities. Children received either hydroxyurea (N = 104) or placebo (N = 103). Malaria incidence did not differ between children on hydroxyurea (0.05 episodes per child per year; 95% confidence interval [0.02, 0.13]) vs placebo (0.07 episodes per child per year [0.03, 0.16]); the hydroxyurea/placebo malaria incidence rate ratio was 0.7 ([0.2, 2.7]; P = .61). Time to infection also did not differ significantly between treatment arms. A composite SCA-related clinical outcome (vaso-occlusive painful crisis, dactylitis, acute chest syndrome, splenic sequestration, or blood transfusion) was less frequent with hydroxyurea (45%) than placebo (69%; P = .001). Children receiving hydroxyurea had significantly increased hemoglobin concentration and fetal hemoglobin, with decreased leukocytes and reticulocytes. Serious AEs, sepsis episodes, and dose-limiting toxicities were similar between treatment arms. Three deaths occurred (2 hydroxyurea, 1 placebo, and none from malaria). Hydroxyurea treatment appears safe for children with SCA living in malaria-endemic sub-Saharan Africa, without increased severe malaria, infections, or AEs. Hydroxyurea provides SCA-related laboratory and clinical efficacy, but optimal dosing and monitoring regimens for Africa remain undefined. This trial was registered at www.clinicaltrials.gov as #NCT01976416

A Preliminary Study of the Role of Gastrointestinal Endocrine Cells in the Maintenance of Villous Structure Following X-Irradiation

The mechanism of gastrointestinal villous damage following ionizing irradiation is complex. Various compartments within the gastrointestinal tract have in turn been considered important for the maintenance of normal villous structure. To date, however, evidence for a single overriding regulator of epithelial well-being is lacking. In this study, the role of the gastrointestinal (enteroendocrine) cells is explored and comparison made between endocrine cell number and villous structure. Experiments were organised using hath control and irradiated groups of mice. Two time points (1 and 3 days) and three radiation doses (6, 10 and 18Gy) were employed. A simple method for endocrine cell identification and subsequent quantification is described. Endocrine cell number was then compared with villous surface detail, as seen with a scanning electron microscope (SEM). Results indicated a decrease in the endocrine cell number at all three radiation doses. Whereas at low doses endocrine cell recovery occurred between 1 and 3 days, at medium and high doses further decline was noticed. A similar pattern was seen when considering villous surface structure. It is suggested that both scanning electron microscopy and endocrine cell number provide a more sensitive indicator of gastrointestinal radiation damage than do current crypt counting techniques. In addition, a link between endocrine cell number and villous structure is proposed

Decontamination of a \u3cem\u3eHistoplasma capsulatum\u3c/em\u3e-Infested Blackbird Roost: Use of a Sprinkler System to Apply Formalin

When disturbed, blackbird/starling roost sites can be sources of locally severe outbreaks of histoplasmosis; therefore decontamination with formalin is sometimes prudent. We describe the use of a $5000 sprinkler system for spraying formalin on a Histoplasma capsulatum-infested roost site. This system precludes direct worker involvement in the application of this hazardous chemical to the area. Analysis of soil samples collected and cultured both before and after formalin treatment confirmed the eradication of H. capsulatum from the 1.3 ha site. Cost was approximately$17,000 with sprinkler system provided at no charge

Global-Local Finite Element Analysis

114 σ.Η αναλυτική επίλυση πολύπλοκων προβλημάτων της μηχανικής στις μέρες μας καθίσταται δυσχερής εως αδύνατη χωρίς την εφαρμογή αριθμητικών μεθόδων και τη χρήση ηλεκτρονικού υπολογιστή. Η μέθοδος των πεπερασμένων στοιχείων αποτελεί σήμερα ένα ισχυρό εργαλείο για την επίλυση τέτοιων προβλημάτων και εξελίσσεται με μεγάλη ταχύτητα τόσο σε ακαδημαϊκό όσο και σε επαγγελματικό επίπεδο. Ενδεικτικά, αν και επινοήθηκε και χρησιμοποιήθηκε για τη στατική ανάλυση φορέων, έχει καθολικότερη εφαρμογή σε μια ευρύτερη κατηγορία προβλημάτων του μηχανικού, όπως στη ρευστομηχανική, στη μεταφορά θερμότητας, στην ακουστική, στον ηλεκτρομαγνητισμό και στην εμβιομηχανική. Επιπλέον, η εξέλιξη στων Η/Υ με τις ολοένα μεγαλύτερες δυνατότητες διαχείρισης όγκου δεδομένων αλλά και με την αύξηση της ταχύτητας εκτέλεσης των αριθμητικών πράξεων κατέστησε εφικτή την επίλυση σύνθετων προβλημάτων τα οποία θεωρούνταν απροσπέλαστα πριν μερικά χρόνια. Στην κατηγορία αυτή, των προβλημάτων αυξημένου υπολογιστικού κόστους, ανήκει και η καταστατική περιγραφή πολυφασικών υλικών. Είναι γεγονός ότι το μεγαλύτερο μέρος των παραγώμενων δομικών υλικών σήμερα, παρουσιάζει κάποιο είδος ανομοιογένειας, διακριτή ή μη στην κλίμακα δομικών έργων. Χαρακτηριστικά παραδείγματα αποτελούν τα κράματα μετάλλων, τα πορώδη, τα πολυκρυσταλλικά και τα σύνθετα υλικά στα οποία το μέγεθος, το σχήμα και οι ιδιότητες των συστατικών τους μερών καθορίζουν άμεσα τη συνολική τους μηχανική συμπεριφορά. Διάφορες τεχνικές έχουν αναπτυχθεί για την προσομοίωση και την περιγραφή της απόκρισης ανομοιογενών υλικών. Η παρούσα εργασία επικεντρώνεται στη μέθοδο ομογενοποίησης πολλαπλών κλιμάκων η οποία συνίσταται στην επίλυση δύο εμφωλευμένων προβλημάτων συνοριακών τιμών, για τη μακροκλίμακα και τη μικροκλίμακα αντίστοιχα. Τα βασικά χαρακτηριστικά μιας τέτοιας μεθόδου είναι ότι - Δεν απαιτείται η περιγραφή των καταστατικών νόμων του μακροφορέα. - Παρέχει τη δυνατότητα ενσωμάτωσης μεγάλων παραμορφώσεων και στροφών τόσο στην προσομοίωση της μικροκλίμακας όσο και του μακροφορέα. - Παρέχει τη δυνατότητα λεπτομερούς προσομοίωσης των συστατικών μερών της μικροκλίμακας. - Επιτρέπει οποιαδήποτε τεχνική επίλυσης στην κλίμακα του μικροφορέα. Αναλυτικά, σύμφωνα με τη μέθοδο αυτή. υπολογίζεται το διάνυσμα ανηγμένων παραμορφώσεων σε κάθε υλικό σημείο του μακροφορέα το οποίο στη συνέχεια χρησιμοποιείται για τη μόρφωση των συνοριακών συνθηκών του αντιπροσωπευτικού μικροφορέα στο αντίστοιχο σημείο. Μετά την επίλυση του προβλήματος συνοριακών τιμών της μικροκλίμακας, το διάνυσμα των τάσεων του μακροφορέα υπολογίζεται μέσα από τη διαδικασία ομογενοποίησης του πεδίου των τάσεων και κατά τον τρόπο αυτό υπολογίζεται η σχέση τάσεων ανηγμένων παραμορφώσεων για κάθε υλικό σημείο Ωστόσο, υπάρχουν κάποιοι περιορισμοί στην εφαρμογή της εν λόγω υπολογιστικής τεχνικής. Συγκεκριμένα, παρά το ότι κατά την προσομοίωση λαμβάνονται υπ' όψην οι διάφορες παράμετροι της μικροκλίμακας όπως το ποσοστό όγκου, η κατανομή και η μορφολογία των συστατικών μερών του υλικού, τα αποτελέσματα της μεθόδου είναι ανεξάρτητα από το απόλυτο μέγεθος του αντιπροσωπευτικού όγκου της μικροκλίμακας. Παρ' όλα αυτά, η τεχνική ομογενοποίησης στα πλαίσια ανάλυσης πολλαπλών κλιμάκων αποτελεί ένα σημαντικό εργαλείο για τον υπολογισμό των καταστατικών σχέσεων πολυφασικών υλικών στα οποία είναι αδύνατη η εφαρμογή οποιασδήποτε άλλης μεθόδου.Nowadays, analysis of complicated problems in the domain of mechanics consti- tutes a hard and even impossible task without the implementation of numerical methods and the employment of computational machines. Finite element method is a powerful tool for the solution of such problems and is rapidly developed in an academic and professional sense. Even if it was developed and implemented for structural analysis, it is widely employed in several domains such as in fluid mechanics, heat transfer, acoustics and electromagnetism. Furthermore, the development of computer hardware in terms of data processing, has significantly contributed to the solution of problems that were considered inaccessible a few years ago. Most of the materials produced in industry are heterogeneous on one or another spatial scale. Typical examples include metal alloy systems, porous media and polycrystalline materials and composites. The overall response of these micro heterogeneous materials depends strongly on the size, shape properties and spatial distribution of the microstructural components. Several techniques have been developed for the prediction of the macroscopic behavior of such materials. The present work is concentrated on the first order homogenization technique in the framework of a multi-scale approach which consists of the solution of two nested boundary value problems, for the macro-scale and the micro-scale respectively. Methods of this type - Do not require any constitutive assumption with respect to the overall ma- terial behavior. - Enable the incorporation of large deformations and rotations on both micro and macrolevel. - Provide the possibility to introduce detailed microstructural information. - Allow the use of any modelling technique at the microlevel. Concretely, according to this approach, the macroscopic deformation tensor is calculated for every integration point of the macrostructure and then is used to formulate the kinematic boundary conditions for the associated microstructural representative volume element (RVE). After the solution of the microstructural boundary value problem, the macroscopic stress tensor is computed by averaging the resulting microstructural stress field over the volume of the RVE and as a result, we obtain the stress-strain relation at every macroscopic point. However, there is a major disadvantage of the existing first-order computational homogenization. More specifically, this technique can account for the volume fraction, distribution and morphology of the micro-components however, it cannot take into account the absolute size of the microstructure making it thus impossible to treat microstructural size effects. Nevertheless, computational homogenization provides a significant strategy to obtain micro-macro structure-property relations for materials for which the overall macroscopic response cannot be computed by any other method.Κωνσταντινος Ε. Τατση