Dependence of Spiral Galaxy Distribution on Viewing Angle in RC3

The normalized inclination distributions are presented for the spiral galaxies in RC3. The results show that, except for the bin of $81^{\circ}$-$90^{\circ}$, in which the apparent minor isophotal diameters that are used to obtain the inclinations, are affected by the central bulges, the distributions for Sa, Sab, Scd and Sd are well consistent with the Monte-Carlo simulation of random inclinations within 3-$\sigma$, and Sb and Sbc almost, but Sc is different. One reason for the difference between the real distribution and the Monte-Carlo simulation of Sc may be that some quite inclined spirals, the arms of which are inherently loosely wound on the galactic plane and should be classified to Sc galaxies, have been incorrectly classified to the earlier ones, because the tightness of spiral arms which is one of the criteria of the Hubble classification in RC3 is different between on the galactic plane and on the tangent plane of the celestial sphere. Our result also implies that there might exist biases in the luminosity functions of individual Hubble types if spiral galaxies are only classified visually.Comment: 5 pages + 8 figures, LaTe

Halo Occupation Distribution Modeling of Clustering of Luminous Red Galaxies

We perform Halo Occupation Distribution (HOD) modeling to interpret small-scale and intermediate-scale clustering of 35,000 luminous early-type galaxies and their cross-correlation with a reference imaging sample of normal L* galaxies in the Sloan Digital Sky Survey. The modeling results show that most of these luminous red galaxies (LRGs) are central galaxies residing in massive halos of typical mass M ~ a few times 10^13 to 10^14 Msun/h, while a few percent of them have to be satellites within halos in order to produce the strong auto-correlations exhibited on smaller scales. The mean luminosity Lc of central LRGs increases with the host halo mass, with a rough scaling relation of Lc \propto M^0.5. The halo mass required to host on average one satellite LRG above a luminosity threshold is found to be about 10 times higher than that required to host a central LRG above the same threshold. We find that in massive halos the distribution of L* galaxies roughly follows that of the dark matter and their mean occupation number scales with halo mass as M^1.5. The HOD modeling results also allows for an intuitive understanding of the scale-dependent luminosity dependence of the cross-correlation between LRGs and L_* galaxies. Constraints on the LRG HOD provide tests to models of formation and evolution of massive galaxies, and they are also useful for cosmological parameter investigations. In one of the appendices, we provide LRG HOD parameters with dependence on cosmology inferred from modeling the two-point auto-correlation functions of LRGs.Comment: 21 pages, 10 figures, accepted for publication in Ap

Age Estimations of M31 Globular Clusters from Their Spectral Energy Distributions

This paper presents accurate spectral energy distributions (SEDs) of 16 M31 globular clusters (GCs) confirmed by spectroscopy and/or high spatial-resolution imaging, as well as 30 M31 globular cluster candidates detected by Mochejska et al. Most of these candidates have m_V > 18, deeper than previous searches, and these candidates have not yet been confirmed to be globular clusters. The SEDs of these clusters and candidates are obtained as part of the BATC Multicolor Survey of the Sky, in which the spectrophotometrically-calibrated CCD images of M31 in 13 intermediate-band filters from 4000 to 10000 A were observed. These filters are specifically designed to exclude most of the bright and variable night-sky emission lines including the OH forest. In comparison to the SEDs of true GCs, we find that some of the candidate objects are not GCs in M31. SED fits show that theoretical simple stellar population (SSP) models can fit the true GCs very well. We estimate the ages of these GCs by comparing with SSP models. We find that, the M31 clusters range in age from a few ten Myr to a few Gyr old, as well as old GCs, confirming the conclusion that has been found by Barmby et a, Williams & Hodge, Beasley et al., Burstein et al. and Puzia et al. in their investigations of the SEDs of M31 globular clusters.Comment: Accepted for Publication in A&Ap, 13 pages, 6 figure

The Luminosity, Colour and Morphology dependence of galaxy filaments in the Sloan Digital Sky Survey Data Release Four

We have tested for luminosity, colour and morphology dependence of the degree of filamentarity in seven nearly two dimensional strips from the Sloan Digital Sky Survey Data Release Four (SDSS DR4). The analysis is carried out at various levels of coarse graining allowing us to address different length-scales. We find that the brighter galaxies have a less filamentary distribution than the fainter ones at all levels of coarse graining. The distribution of red galaxies and ellipticals shows a higher degree of filamentarity compared to blue galaxies and spirals respectively at low levels of coarse graining. The behaviour is reversed at higher levels of coarse graining. We propose a picture where the ellipticals are densely distributed in the vicinity of the nodes where the filaments intersect while the spirals are sparsely distributed along the entire extent of the filaments. Our findings indicate that the regions with an excess of ellipticals are larger than galaxy clusters, protruding into the filaments. We have also compared the predictions of a semi-analytic model of galaxy formation (the Millennium Run galaxy catalogue) against our results for the SDSS. We find the two to be in agreement for the $M^{*}$ galaxies and for the red galaxies, while the model fails to correctly predict the filamentarity of the brighter galaxies and the blue galaxies.Comment: 14 Pages, 2 tables, 11 figures, Accepted for publication in MNRAS, new section added for a comparison with semi analytical models of galaxy formation, substantial revisio

Large Scale Structure of the Universe

Galaxies are not uniformly distributed in space. On large scales the Universe displays coherent structure, with galaxies residing in groups and clusters on scales of ~1-3 Mpc/h, which lie at the intersections of long filaments of galaxies that are >10 Mpc/h in length. Vast regions of relatively empty space, known as voids, contain very few galaxies and span the volume in between these structures. This observed large scale structure depends both on cosmological parameters and on the formation and evolution of galaxies. Using the two-point correlation function, one can trace the dependence of large scale structure on galaxy properties such as luminosity, color, stellar mass, and track its evolution with redshift. Comparison of the observed galaxy clustering signatures with dark matter simulations allows one to model and understand the clustering of galaxies and their formation and evolution within their parent dark matter halos. Clustering measurements can determine the parent dark matter halo mass of a given galaxy population, connect observed galaxy populations at different epochs, and constrain cosmological parameters and galaxy evolution models. This chapter describes the methods used to measure the two-point correlation function in both redshift and real space, presents the current results of how the clustering amplitude depends on various galaxy properties, and discusses quantitative measurements of the structures of voids and filaments. The interpretation of these results with current theoretical models is also presented.Comment: Invited contribution to be published in Vol. 8 of book "Planets, Stars, and Stellar Systems", Springer, series editor T. D. Oswalt, volume editor W. C. Keel, v2 includes additional references, updated to match published versio

A "super" star cluster grown old: the most massive star cluster in the Local Group

We independently redetermine the reddening and age of the globular cluster 037-B327 in M31 by comparing independently obtained multicolour photometry with theoretical stellar population synthesis models. 037-B327 has long been known to have a very large reddening value, which we confirm to be E(B-V)=1.360+-0.013, in good agreement with the previous results. We redetermine its most likely age at 12.4+- 3.2 Gyr. 037-B327 is a prime example of an unusually bright early counterpart to the ubiquitous ``super'' star clusters presently observed in most high-intensity star-forming regions in the local Universe. In order to have survived for a Hubble time, we conclude that its stellar IMF cannot have been top-heavy. Using this constraint, and a variety of SSP models, we determine a photometric mass of M_{GC}=(3.0+-0.5)*10^7, somewhat depending on the SSP models used, the metallicity and age adopted and the IMF representation. This mass, and its relatively small uncertainties, make this object the most massive star cluster of any age in the Local Group. Assuming that the photometric mass estimate thus derived is fairly close to its dynamical mass, we predict that this GC has a (one-dimensional) velocity dispersion of order (72+-13)km/s. As a surviving "super" star cluster, this object is of prime importance for theories aimed at describing massive star cluster evolution.Comment: Accepted for Publication in MNRAS, 8 pages, 4 figure

Robust Detection of Hierarchical Communities from Escherichia coli Gene Expression Data

Determining the functional structure of biological networks is a central goal of systems biology. One approach is to analyze gene expression data to infer a network of gene interactions on the basis of their correlated responses to environmental and genetic perturbations. The inferred network can then be analyzed to identify functional communities. However, commonly used algorithms can yield unreliable results due to experimental noise, algorithmic stochasticity, and the influence of arbitrarily chosen parameter values. Furthermore, the results obtained typically provide only a simplistic view of the network partitioned into disjoint communities and provide no information of the relationship between communities. Here, we present methods to robustly detect coregulated and functionally enriched gene communities and demonstrate their application and validity for Escherichia coli gene expression data. Applying a recently developed community detection algorithm to the network of interactions identified with the context likelihood of relatedness (CLR) method, we show that a hierarchy of network communities can be identified. These communities significantly enrich for gene ontology (GO) terms, consistent with them representing biologically meaningful groups. Further, analysis of the most significantly enriched communities identified several candidate new regulatory interactions. The robustness of our methods is demonstrated by showing that a core set of functional communities is reliably found when artificial noise, modeling experimental noise, is added to the data. We find that noise mainly acts conservatively, increasing the relatedness required for a network link to be reliably assigned and decreasing the size of the core communities, rather than causing association of genes into new communities.Comment: Due to appear in PLoS Computational Biology. Supplementary Figure S1 was not uploaded but is available by contacting the author. 27 pages, 5 figures, 15 supplementary file

Fluids in cosmology

We review the role of fluids in cosmology by first introducing them in General Relativity and then by applying them to a FRW Universe's model. We describe how relativistic and non-relativistic components evolve in the background dynamics. We also introduce scalar fields to show that they are able to yield an inflationary dynamics at very early times (inflation) and late times (quintessence). Then, we proceed to study the thermodynamical properties of the fluids and, lastly, its perturbed kinematics. We make emphasis in the constrictions of parameters by recent cosmological probes.Comment: 34 pages, 4 figures, version accepted as invited review to the book "Computational and Experimental Fluid Mechanics with Applications to Physics, Engineering and the Environment". Version 2: typos corrected and references expande

A review of elliptical and disc galaxy structure, and modern scaling laws

A century ago, in 1911 and 1913, Plummer and then Reynolds introduced their models to describe the radial distribution of stars in `nebulae'. This article reviews the progress since then, providing both an historical perspective and a contemporary review of the stellar structure of bulges, discs and elliptical galaxies. The quantification of galaxy nuclei, such as central mass deficits and excess nuclear light, plus the structure of dark matter halos and cD galaxy envelopes, are discussed. Issues pertaining to spiral galaxies including dust, bulge-to-disc ratios, bulgeless galaxies, bars and the identification of pseudobulges are also reviewed. An array of modern scaling relations involving sizes, luminosities, surface brightnesses and stellar concentrations are presented, many of which are shown to be curved. These 'redshift zero' relations not only quantify the behavior and nature of galaxies in the Universe today, but are the modern benchmark for evolutionary studies of galaxies, whether based on observations, N-body-simulations or semi-analytical modelling. For example, it is shown that some of the recently discovered compact elliptical galaxies at 1.5 < z < 2.5 may be the bulges of modern disc galaxies.Comment: Condensed version (due to Contract) of an invited review article to appear in "Planets, Stars and Stellar Systems"(www.springer.com/astronomy/book/978-90-481-8818-5). 500+ references incl. many somewhat forgotten, pioneer papers. Original submission to Springer: 07-June-201

Measuring our universe from galaxy redshift surveys

Galaxy redshift surveys have achieved significant progress over the last couple of decades. Those surveys tell us in the most straightforward way what our local universe looks like. While the galaxy distribution traces the bright side of the universe, detailed quantitative analyses of the data have even revealed the dark side of the universe dominated by non-baryonic dark matter as well as more mysterious dark energy (or Einstein's cosmological constant). We describe several methodologies of using galaxy redshift surveys as cosmological probes, and then summarize the recent results from the existing surveys. Finally we present our views on the future of redshift surveys in the era of Precision Cosmology.Comment: 82 pages, 31 figures, invited review article published in Living Reviews in Relativity, http://www.livingreviews.org/lrr-2004-