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The bii4africa dataset of faunal and floral population intactness estimates across Africaâs major land uses
Sub-Saharan Africa is under-represented in global biodiversity datasets, particularly regarding the impact of land use on speciesâ population abundances. Drawing on recent advances in expert elicitation to ensure data consistency, 200 experts were convened using a modified-Delphi process to estimate âintactness scoresâ: the remaining proportion of an âintactâ reference population of a species group in a particular land use, on a scale from 0 (no remaining individuals) to 1 (same abundance as the reference) and, in rare cases, to 2 (populations that thrive in human-modified landscapes). The resulting bii4africa dataset contains intactness scores representing terrestrial vertebrates (tetrapods: ±5,400 amphibians, reptiles, birds, mammals) and vascular plants (±45,000 forbs, graminoids, trees, shrubs) in sub-Saharan Africa across the regionâs major land uses (urban, cropland, rangeland, plantation, protected, etc.) and intensities (e.g., large-scale vs smallholder cropland). This dataset was co-produced as part of the Biodiversity Intactness Index for Africa Project. Additional uses include assessing ecosystem condition; rectifying geographic/ taxonomic biases in global biodiversity indicators and maps; and informing the Red List of Ecosystems
Effects of intrinsic microbial stress factors on viability and physiological condition of yeasts isolated from spontaneously fermented cereal doughs
Occurrence of lactic acid bacteria and yeasts at species and strain level during spontaneous fermentation of mawĂš, a cereal dough produced in West Africa
Multifunctional properties and safety evaluation of lactic acid bacteria and yeasts associated with fermented cereal doughs
Effects of intrinsic microbial stress factors on viability and physiological condition of yeasts isolated from spontaneously fermented cereal doughs
Comparison of the microbial composition of African fermented foods using amplicon sequencing
Fermented foods play a major role in the diet of people in Africa, where a wide variety of raw materials
are fermented. Understanding the microbial populations of these products would help in the design of
specific starter cultures to produce standardized and safer foods. In this study, the bacterial diversity of
African fermented foods produced from several raw materials (cereals, milk, cassava, honey, palm sap,
and locust beans) under different conditions (household, small commercial producers or laboratory) in 8
African countries was analysed by 16S rRNA gene amplicon sequencing during the Workshop âAnalysis
of the Microbiomes of Naturally Fermented Foods Training Courseâ. Results show that lactobacilli
were less abundant in fermentations performed under laboratory conditions compared to artisanal or
commercial fermentations. Excluding the samples produced under laboratory conditions, lactobacilli
is one of the dominant groups in all the remaining samples. Genera within the order Lactobacillales
dominated dairy, cereal and cassava fermentations. Genera within the order Lactobacillales, and genera
Zymomonas and Bacillus were predominant in alcoholic beverages, whereas Bacillus and Lactobacillus
were the dominant genera in the locust bean sample. The genus Zymomonas was reported for the first
time in dairy, cereal, cassava and locust bean fermentations.The UK Biotechnology and Biological Sciences Research Council (BBSRC) via a
Global Challenge Research Fund Data and Resources award and Institute Strategic Programmes for Food
Innovation and Health (BB/R012512/1) and its constituent project BBS/E/F/000PR10343 and Gut Microbes and
Health (BB/R012490/1). M. D. was the beneficiary of a Clarin COFUND outgoing grants (ACA17â16) co-funded
by the 7th Work Package of the European Union, Marie Curie Actions and the FICyT Foundation.http://www.nature.com/srepam2020Consumer ScienceFood Scienc
The bii4africa dataset of faunal and floral population intactness estimates across Africaâs major land uses
International audienceSub-Saharan Africa is under-represented in global biodiversity datasets, particularly regarding the impact of land use on species' population abundances. Drawing on recent advances in expert elicitation to ensure data consistency, 200 experts were convened using a modified-Delphi process to estimate 'intactness scores': the remaining proportion of an 'intact' reference population of a species group in a particular land use, on a scale from 0 (no remaining individuals) to 1 (same abundance as the reference) and, in rare cases, to 2 (populations that thrive in human-modified landscapes). The resulting bii4africa dataset contains intactness scores representing terrestrial vertebrates (tetrapods: ±5,400 amphibians, reptiles, birds, mammals) and vascular plants (±45,000 forbs, graminoids, trees, shrubs) in sub-Saharan Africa across the region's major land uses (urban, cropland, rangeland, plantation, protected, etc.) and intensities (e.g., large-scale vs smallholder cropland). This dataset was co-produced as part of the Biodiversity Intactness Index for Africa Project. Additional uses include assessing ecosystem condition; rectifying geographic/ taxonomic biases in global biodiversity indicators and maps; and informing the Red List of Ecosystems
bi4africa dataset - open source
The bii4africa dataset is presented in a multi-spreadsheet .ods file. The raw data spreadsheet (âScores_Rawâ) includes 31,313 individual expert estimates of the impact of a sub-Saharan African land use on a species response group of terrestrial vertebrates or vascular plants. Estimates are reported as intactness scores - the remaining proportion of an âintactâ reference (pre-industrial or contemporary wilderness area) population of a species response group in a land use, on a scale from 0 (no individuals remain) through 0.5 (half the individuals remain), to 1 (same as the reference population) and, in limited cases, to 2 (two or more times the reference population). For species that thrive in human-modified landscapes, scores could be greater than 1 but not exceeding 2 to avoid extremely large scores biasing aggregation exercises. Expert comments are included alongside respective estimates