Developing web services in a computational grid environment

Grid and Web services are both hot topics today. In this paper, we will present some ongoing work and planned future work at the Cambridge eScience Centre. After an introduction to these technologies in the context of Grid applications development, we describe two use-cases: a database of results in computational fluid dynamics (CFD) and a small computational Grid for aircraft engineering design. As Grid services are moving towards Web services, we continue to make use of the Globus Toolkit v2.4 (GT2.4), without adopting the Open Grid Services Architecture (OGSA) wholesale. In our scenario, GT2.4 integrates distributed computing resources including HPC and clusters while Web services wrap the scientific code as a service.Proceedings of the IEEE International Conference on Services Computing, Shanghai, September 200

Loss-tolerant operations in parity-code linear optics quantum computing

A heavy focus for optical quantum computing is the introduction of error-correction, and the minimisation of resource requirements. We detail a complete encoding and manipulation scheme designed for linear optics quantum computing, incorporating scalable operations and loss-tolerant architecture.Comment: 8 pages, 6 figure

Using Lyman-alpha to detect galaxies that leak Lyman continuum

We propose to infer ionising continuum leaking properties of galaxies by looking at their Lyman-alpha line profiles. We carry out Lyman-alpha radiation transfer calculations in two models of HII regions which are porous to ionising continuum escape: 1) the so-called "density bounded" media, in which massive stars produce enough ionising photons to keep the surrounding interstellar medium transparent to the ionising continuum, i.e almost totally ionised, and 2) "riddled ionisation-bounded" media, surrounded by neutral interstellar medium, but with holes, i.e. with a covering factor lower than unity. The Lyman-alpha spectra emergent from these configurations have distinctive features: 1) a "classical" asymmetric redshifted profile in the first case, but with a small shift of the maximum of the profile compare to the systemic redshift (Vpeak < 150 km/s); 2) a main peak at the systemic redshift in the second case (Vpeak = 0 km/s), with, as a consequence, a non-zero Lyman-alpha flux bluewards the systemic redshift. Assuming that in a galaxy leaking ionising photons, the Lyman-alpha component emerging from the leaking star cluster(s) dominates the total Lyman-alpha spectrum, the Lyman-alpha shape may be used as a pre-selection tool to detect Lyman continuum (LyC) leaking galaxies, in objects with well determined systemic redshift, and high spectral resolution Lyman-alpha spectra (R >= 4000). The examination of a sample of 10 local starbursts with high resolution HST-COS Lyman-alpha spectra and known in the literature as LyC leakers or leaking candidates, corroborates our predictions. Observations of Lyman-alpha profiles at high resolution should show definite signatures revealing the escape of Lyman continuum photons from star-forming galaxies.Comment: A&A in pres

VLT/MUSE view of the highly ionized outflow cones in the nearby starburst ESO338-IG04

The Ly$\alpha$ line is an important diagnostic for star formation at high redshift, but interpreting its flux and line profile is difficult because of the resonance nature of Ly$\alpha$. Trends between the escape of Ly$\alpha$ photons and dust and properties of the interstellar medium (ISM) have been found, but detailed comparisons between Ly$\alpha$ emission and the properties of the gas in local high-redshift analogs are vital for understanding the relation between Ly$\alpha$ emission and galaxy properties. For the first time, we can directly infer the properties of the ionized gas at the same location and similar spatial scales of the extended Ly$\alpha$ halo around ESO 338-IG04. We obtained VLT/MUSE integral field spectra. We used ionization parameter mapping of the [SII]/[OIII] line ratio and the kinematics of H$\alpha$ to study the ionization state and kinematics of the ISM of ESO338-IG04. The velocity map reveals two outflows. The entire central area of the galaxy is highly ionized by photons leaking from the HII regions around the youngest star clusters. Three highly ionized cones have been identified, of which one is associated with an outflow. We propose a scenario where the outflows are created by mechanical feedback of the older clusters, while the highly ionized gas is caused by the hard ionizing photons emitted by the youngest clusters. A comparison with the Ly$\alpha$ map shows that the (approximately bipolar) asymmetries observed in the Ly$\alpha$ emission are consistent with the base of the outflows detected in H$\alpha$. No clear correlation with the ionization cones is found. The mechanical and ionization feedback of star clusters significantly changes the state of the ISM by creating ionized cones and outflows. The comparison with Ly$\alpha$ suggests that especially the outflows could facilitate the escape of Ly$\alpha$ photons [Abridged].Comment: Accepted for publication in A&A Letters, 4 pages, 2 figure

Expression of three GnRH receptors in specific tissues in male and female sea lampreys Petromyzon marinus at three distinct life stages

Two recently cloned gonadotropin-releasing hormone (GnRH) receptors (lamprey GnRH-R-2 and lamprey GnRH-R-3) along with lamprey (l) GnRH-R-1 were shown to share similar structural features and amino acid motifs common to other vertebrate receptors. Here we report on our findings of RNA expression of these three GnRH receptors in the three major life stages (larval, parasitic, and adult phases) of the sea lamprey, Petromyzon marinus, a basal vertebrate. For each stage, we examined the expression of messenger RNA encoding the receptors in the brain, pituitary, gonad, heart, muscle, liver, eye, intestine, kidney, skin, thyroid, gill, and endostyle by RT-PCR. In adult lampreys, the spatial expression of the three receptors in the brain and pituitary was investigated by in situ hybridization. In general, the receptors were more widely expressed in adult tissues as compared to parasitic-phase tissues and least widely expressed in the larval tissues. There were noted differences in male and female lampreys in the adult and parasitic phases for all three receptors. The data showed the presence of all three receptor transcripts in brain tissues for adult and parasitic phases and all three receptor transcripts were expressed in the adult pituitaries, but not in the parasitic pituitaries. However, in the larval phase, only lGnRH-R-1 was expressed in the larval brain and pituitary. In situ hybridization revealed that lGnRH-R-2 and -3 were expressed in the pineal tissue of adult female lampreys while lGnRH-R-1 was expressed in the pineal in adult male lampreys, all restricted to the pineal pellucida. In summary, these data provide an initial comparative analysis of expression of three lamprey GnRH receptors suggesting differential regulation within males and females at three different life/reproductive stages

Trident: A three-pronged galaxy survey. I. Lyman alpha emitting galaxies at z~2 in GOODS North

Context. Lyman alpha emitting galaxies (LAEs) are used to probe the distant universe and are therefore important for galaxy evolution studies and for providing clues to the nature of the epoch of reionization, but the exact circumstances under which Lyman alpha escapes a galaxy are still not fully understood. Aims. The Trident project is designed to simultaneously examine Lyman alpha, H-alpha and Lyman Continuum emission from galaxies at redshift z~2, thus linking together these three aspects of ionising radiation in galaxies. In this paper, we outline the strategy of this project and examine the properties of LAEs in the GOODS North field. Methods. We performed a narrowband LAE survey in GOODS North using existing and two custom made filters at the Nordic Optical Telescope with MOSCA. We use complementary broad band archival data in the field to make a careful candidate selection and perform optical to near-IR SED fitting. We also estimate far-infrared luminosities by matching our candidates to detections in Spitzer/MIPS 24{\mu}m and Herschel/PACS catalogs. Results. We find a total of 25 LAE candidates, probing mainly the bright end of the LAE luminosity function with L_Ly {\alpha} ~ 1-15e42 erg/s. They display a range of masses of ~0.5-50e9 M_solar, and average ages from a few tens of Myr to 1 Gyr when assuming a constant star formation history. The majority of our candidates also show signs of recent elevated star formation. Three candidates have counterparts in the GOODS-Herschel far-IR catalogue, with luminosities consistent with ultra-luminous infrared galaxies (ULIRGs). Conclusions. The wide range of parameters derived from our SED fitting, as well as part of our sample being detected as ULIRGs, seems to indicate that at these Lyman alpha luminosities, LAEs do not necessarily have to be young dwarfs, and that a lack of dust is not required for Lyman alpha to escape.Comment: 16 pages, 12 figures. Accepted version for publication in A&

Loss Tolerant Optical Qubits

We present a linear optics quantum computation scheme that employs a new encoding approach that incrementally adds qubits and is tolerant to photon loss errors. The scheme employs a circuit model but uses techniques from cluster state computation and achieves comparable resource usage. To illustrate our techniques we describe a quantum memory which is fault tolerant to photon loss

Isotope Ratio Monitoring Gas Chromatography Mass Spectrometry (IRM-GCMS)

On Earth, the C-13 content of organic compounds is depleted by roughly 13 to 23 permil from atmospheric carbon dioxide. This difference is largely due to isotope effects associated with the fixation of inorganic carbon by photosynthetic organisms. If life once existed on Mars, then it is reasonable to expect to observe a similar fractionation. Although the strongly oxidizing conditions on the surface of Mars make preservation of ancient organic material unlikely, carbon-isotope evidence for the existence of life on Mars may still be preserved. Carbon depleted in C-13 could be preserved either in organic compounds within buried sediments, or in carbonate minerals produced by the oxidation of organic material. A technique is introduced for rapid and precise measurement of the C-13 contents of individual organic compounds. A gas chromatograph is coupled to an isotope-ratio mass spectrometer through a combustion interface, enabling on-line isotopic analysis of isolated compounds. The isotope ratios are determined by integration of ion currents over the course of each chromatographic peak. Software incorporates automatic peak determination, corrections for background, and deconvolution of overlapped peaks. Overall performance of the instrument was evaluated by the analysis of a mixture of high purity n-alkanes of know isotopic composition. Isotopic values measured via IRM-GCMS averaged withing 0.55 permil of their conventionally measured values

Programmed schedule holds for improving launch vehicle holds

Baseline definition and system optimization are used for the analysis of programmed holds developed through prelaunch system analysis. Identification of design specifications for ground support equipment and maintenance concepts, and design specifications are used to describe the functional utilization of the overall flow process