Sensitivity of OMI SO<inf>2</inf> measurements to variable eruptive behaviour at Soufrière Hills Volcano, Montserrat

Since 2004, the satellite-borne Ozone Mapping Instrument (OMI) has observed sulphur dioxide (SO$_{2}$) plumes during both quiescence and effusive eruptive activity at Soufrière Hills Volcano, Montserrat. On average, OMI detected a SO$_{2}$ plume 4–6 times more frequently during effusive periods than during quiescence in the 2008–2010 period. The increased ability of OMI to detect SO$_{2}$ during eruptive periods is mainly due to an increase in plume altitude rather than a higher SO$_{2}$ emission rate. Three styles of eruptive activity cause thermal lofting of gases (Vulcanian explosions; pyroclastic flows; a hot lava dome) and the resultant plume altitudes are estimated from observations and models. Most lofting plumes from Soufrière Hills are derived from hot domes and pyroclastic flows. Although Vulcanian explosions produced the largest plumes, some produced only negligible SO$_{2}$ signals detected by OMI. OMI is most valuable for monitoring purposes at this volcano during periods of lava dome growth and during explosive activity.This work was supported by the NERC National Centre for Earth Observation (Theme 6: Dynamic Earth) grant, NE/E015093/1.This is the final version of the article. It first appeared from Elsevier via http://dx.doi.org/10.1016/j.jvolgeores.2016.01.01

Analisis Pergerakan Vertikal Titik Pantau Jembatan Penggaron, Kabupaten Semarang, Propinsi Jawa Tengah

Penggaron bridge toll highway is located in road Semarang-Ungaran, 20th kilometer in the Susukan region, East Ungaran, Semarang regency, Central Java province. Penggaron bridge has a 400 m length and nine pillars that support the weight of the bridge. This bridge has began operation since 2010. The bridge visually deformed as indicated by small cracks in the pillars of the bridge. Natural factors such as unstable soil conditions are suspected as the cause of deformation. To minimize and prevent damage that may occur on the bridge then the Penggaron bridge deformation monitoring should be performed. Therefore, this study analyze the vertical movement on the Penggaron bridge using height difference observation data by waterpass in 2014 s.d. 2015. &nbsp;This study used&nbsp; four epoch height different observation data on the 18 bridge monitoring points. The 18 monitoring bridges points was tied to two reference points around the bridge. These observation data is processed by Least Squares Adjustment parameter method to get the height and its standard deviation, vertical movement and its standard deviation, vertical movement velocity and its standard deviation as well as average velocity and average acceleration on every bridge monitoring points on each epoch. The next step includes the computation and analysis of vertical movement, as well as the significance of two parameter different test. The results of this study are the vertical movement vector of the 18 monitoring points with magnitude from 3,1 mm to 170,3 mm with the majority down direction. The vertical movement velocity has a range between 3,05 mm/month to&nbsp; 89,35 mm/month with the movement direction tends to downward. The average velocity of vertical movement for epoch I and II is 7,08 mm/month, epoch II and III is 4,93 mm/month, epoch I and &nbsp;III is 6,00 mm/month, epoch III and IV is 6,03 mm/month, epoch I and IV is 1,29 mm/month with the movement direction tends to downward. The average&nbsp; acceleration of vertical movement for epoch I and II is 7,08 mm/month2, epoch II and III is 4,93 mm/month2, epoch I and III is 3,00 mm/month2, epoch III and IV is 6,03 mm/month2. The majority of the significance of two parameter different test parameters is rejected, it means that monitoring points had a significant movement. &nbsp

Failure of RQC machinery causes protein aggregation and proteotoxic stress

Translation of messenger RNAs lacking a stop codon results in the addition of a carboxy-terminal poly-lysine tract to the nascent polypeptide, causing ribosome stalling. Non-stop proteins and other stalled nascent chains are recognized by the ribosome quality control (RQC) machinery and targeted for proteasomal degradation. Failure of this process leads to neurodegeneration by unknown mechanisms. Here we show that deletion of the E3 ubiquitin ligase Ltn1p in yeast, a key RQC component, causes stalled proteins to form detergent-resistant aggregates and inclusions. Aggregation is dependent on a C-terminal alanine/threonine tail that is added to stalled polypeptides by the RQC component, Rqc2p. Formation of inclusions additionally requires the poly-lysine tract present in non-stop proteins. The aggregates sequester multiple cytosolic chaperones and thereby interfere with general protein quality control pathways. These findings can explain the proteotoxicity of ribosome-stalled polypeptides and demonstrate the essential role of the RQC in maintaining proteostasis

Transcriptional landscape of Aspergillus niger at breaking of conidial dormancy revealed by RNA-sequencing

Background Genome-wide analysis was performed to assess the transcriptional landscape of germinating A. niger conidia using both next generation RNA-sequencing and GeneChips. The metabolism of storage compounds during conidial germination was also examined and compared to the transcript levels from associated genes. Results The transcriptome of dormant conidia was shown to be highly differentiated from that of germinating conidia and major changes in response to environmental shift occurred within the first hour of germination. The breaking of dormancy was associated with increased transcript levels of genes involved in the biosynthesis of proteins, RNA turnover and respiratory metabolism. Increased transcript levels of genes involved in metabolism of nitrate at the onset of germination implies its use as a source of nitrogen. The transcriptome of dormant conidia contained a significant component of antisense transcripts that changed during germination. Conclusion Dormant conidia contained transcripts of genes involved in fermentation, gluconeogenesis and the glyoxylate cycle. The presence of such transcripts in dormant conidia may indicate the generation of energy from non-carbohydrate substrates during starvation-induced conidiation or for maintenance purposes during dormancy. The immediate onset of metabolism of internal storage compounds after the onset of germination, and the presence of transcripts of relevant genes, suggest that conidia are primed for the onset of germination. For some genes, antisense transcription is regulated in the transition from resting conidia to fully active germinants

Global distribution of fluoroquinolone and colistin resistance and associated resistance markers in escherichia coli of swine origin – a systematic review and meta-analysis

Background: Fluoroquinolones and polymyxins (colistin) are considered as critical drugs for human medicine. Antimicrobials of these classes are also used in swine production worldwide and this usage can contribute to selection of antimicrobial resistance (AMR), which is a threat to both human and animal health. Given the dynamic epidemiology of AMR, updating our knowledge regarding distribution and trends in the proportion of resistant bacteria is of critical importance. Objectives: The aim of this systematic review and meta-analysis was to describe the global prevalence of phenotypic and genotypic resistance to fluoroquinolones and colistin in Escherichia coli collected from swine. Results: Four databases (PubMed, PubAg, Web of Science, and CAB abstracts) and reports of national surveillance programs were scanned and 360 articles were included in the analysis. We identified higher prevalence levels of fluoroquinolone and colistin resistance in isolates from pig populations in Asia compared to Europe. The heterogeneity of pooled estimates was also higher in Asian countries suggesting that prevalence of AMR is still not fully characterized. There was a major knowledge gap about the situation of AMR in South American and African countries. We also identified key deficiencies in how AMR data was reported in the studies. A meta-analysis using 6, 167 publicly available genomes of swine E. coli established the prevalence and global distribution of genetic determinants that can lead to fluoroquinolone and colistin resistance. Conclusion: This study provides the most comprehensive information on prevalence of phenotypic and genotypic resistance to key antimicrobials in pig populations globally. There is a need to establish national surveillance programs and effective policies, particularly in certain world regions, to curtail the threat of evolution of resistant isolates in swine production that can potentially contribute to public health detrimentally. Copyright © 2022 Hayer, Casanova-Higes, Paladino, Elnekave, Nault, Johnson, Bender, Perez and Alvarez

Editorial: Problem Gambling: Summarizing Research Findings and Defining New Horizons

In 2003, Rachel A. Volberg wrote: “Why is it that gambling is not even on the radar when we consider the array of risks that adolescents must confront as they move towards adulthood?” Nowadays, after thirteen years, although much more is known about this particular form of risk behavior, there is still a general tendency, at least among laypersons, to not perceive gambling as a potential danger for youth and other population segments (e.g., individuals with migration background, seniors, sports professionals). However, the latest edition of the Diagnostic and Statistical Manual of Mental Disorders (DSM-5, American Psychological Association, 2013) included Gambling Disorder as the only condition in the Section Non-Substance-Related Disorders. Moreover, it is specified that the disorder can indeed occur in adolescence or young adulthood. Despite this fact, theoretical and applied research on problem gambling with regard to adolescence and other risk groups is still in its infancy. For this reason, it seems to be important to organize a Research Topic on gambling in Frontiers in Psychology in order to i) highlight the necessity of considering gambling as a potential harmful activity; ii) summarize the state-of-art of international research on different aspects of the topic; and iii) offer important novel findings relevant for advancing knowledge in the field of gambling. Different types of research articles will be provided including original articles, systematic/scoping reviews, meta-analyses, case reports, and commentaries. These contributions will be focused on the following most important areas in gambling research: Measurement (Which are the most widely used instruments to assess gambling-related problems as well as proximate constructs and what are their psychometric properties? Are there new instruments to detect adolescent problem gamblers?), Protective and risk factors (What do we know about ecological and individual influences on gambling behavior? Which factors affect problem gambling most and in which way?), Prevention (Which are the most promising prevention programs implemented until now? Which are necessary ingredients for effective prevention?), Treatment (When individuals seek help for their gambling-related problems, which are the clinical treatments that are offered? Do we have evidence for treatment effectiveness for different subgroups?). To try to fulfill this goal in the most comprehensive way, researchers from different countries and with specific competencies and interests will be contacted and encouraged to submit a contribution. Through the integration of international and multidisciplinary contributions, i) new challenges in the field of gambling will be identified (e.g., definition of specific at-risk groups, specification of effective interventions in terms of best practices) and ii) new research routes (e.g., the use of behavioral data) will be outlined in order to build a comprehensive understanding of problem gambling. The overall aim is to summarize the state of art, to propose original novel findings, and to outline new directions in gambling research

Revisiting caveolin trafficking: the end of the caveosome

In this issue, a study by Hayer et al. (2010. J. Cell Biol. doi: 10.1083/jcb.201003086) provides insights into the trafficking of caveolins, the major membrane proteins of caveolae. As well as providing evidence for ubiquitin-mediated endosomal sorting and degradation of caveolin in multivesicular bodies (MVBs), the new findings question the existence of a unique organelle proposed nine years ago, the caveosome

State based model of long-term potentiation and synaptic tagging and capture

Recent data indicate that plasticity protocols have not only synapse-specific but also more widespread effects. In particular, in synaptic tagging and capture (STC), tagged synapses can capture plasticity-related proteins, synthesized in response to strong stimulation of other synapses. This leads to long-lasting modification of only weakly stimulated synapses. Here we present a biophysical model of synaptic plasticity in the hippocampus that incorporates several key results from experiments on STC. The model specifies a set of physical states in which a synapse can exist, together with transition rates that are affected by high- and low-frequency stimulation protocols. In contrast to most standard plasticity models, the model exhibits both early- and late-phase LTP/D, de-potentiation, and STC. As such, it provides a useful starting point for further theoretical work on the role of STC in learning and memory

Prediction of the disease course in Friedreich ataxia

We explored whether disease severity of Friedreich ataxia can be predicted using data from clinical examinations. From the database of the European Friedreich Ataxia Consortium for Translational Studies (EFACTS) data from up to five examinations of 602 patients with genetically confirmed FRDA was included. Clinical instruments and important symptoms of FRDA were identified as targets for prediction, while variables such as genetics, age of disease onset and first symptom of the disease were used as predictors. We used modelling techniques including generalised linear models, support-vector-machines and decision trees. The scale for rating and assessment of ataxia (SARA) and the activities of daily living (ADL) could be predicted with predictive errors quantified by root-mean-squared-errors (RMSE) of 6.49 and 5.83, respectively. Also, we were able to achieve reasonable performance for loss of ambulation (ROC-AUC score of 0.83). However, predictions for the SCA functional assessment (SCAFI) and presence of cardiological symptoms were difficult. In conclusion, we demonstrate that some clinical features of FRDA can be predicted with reasonable error; being a first step towards future clinical applications of predictive modelling. In contrast, targets where predictions were difficult raise the question whether there are yet unknown variables driving the clinical phenotype of FRDA