New insights into the dynamics of the glutathione-ascorbate redox system of plants

The Hallilwell-Asada-Foyer redox cascade (HAF) is viewed as a H2O2 detoxifying system with a great variety of responses against environmental changes. The functional consequences of these responses are interpreted intuitively because a systemic analysis of the inherent dynamic potential of the HAF is lacking. With the help of numerical modelling we show that in wheat roots parameter patterns are established which result in homeostatic states of HAF over a vast range of environmental changes. The reduced fractions glutathione (GSH) and ascorbate (ASC) remain on high levels even during dramatic changes in the enzyme activity ratios of glutathione reductase, dehydroascorbate reductase and ascorbat peroxidase. Necessarily their oxidised counterparts dithioglutathione (GSSG) and dehydroascorbate (DHA) stay in these buffered regions on very low concentration levels. Our modelling shows that redox ratios GSH/GSSG and ASC/DHA can be modified additionally via changes in NADPH/H2O2 ratios. Thus, the redox states of GSH and ASC can not simply be regarded as indicators for oxidative stress with respect to H2O2 levels. The involvement of the redox variables in other redox processes than the HAF reaction (redox proteome) and / or their utilisation in metabolism (protein modification, detoxification of xenobiotics) are viewed to cause system relaxations of the redox variables. The re-establishment of their homeostatic ratios follow time courses which are redox moiety specific and are balanced according to the existing parameter patterns. Despite of its detoxification function the HAF balances the glutathione / ascorbate redox state in cells according to the prevailing physiological conditions

Strictly Toral Dynamics

This article deals with nonwandering (e.g. area-preserving) homeomorphisms of the torus $\mathbb{T}^2$ which are homotopic to the identity and strictly toral, in the sense that they exhibit dynamical properties that are not present in homeomorphisms of the annulus or the plane. This includes all homeomorphisms which have a rotation set with nonempty interior. We define two types of points: inessential and essential. The set of inessential points $ine(f)$ is shown to be a disjoint union of periodic topological disks ("elliptic islands"), while the set of essential points $ess(f)$ is an essential continuum, with typically rich dynamics (the "chaotic region"). This generalizes and improves a similar description by J\"ager. The key result is boundedness of these "elliptic islands", which allows, among other things, to obtain sharp (uniform) bounds of the diffusion rates. We also show that the dynamics in $ess(f)$ is as rich as in $\mathbb{T}^2$ from the rotational viewpoint, and we obtain results relating the existence of large invariant topological disks to the abundance of fixed points.Comment: Incorporates suggestions and corrections by the referees. To appear in Inv. Mat

Cognitive dysfunction in patients with cerebral microbleeds on T2*-weighted gradient-echo MRI.

Gradient echo T2*-weighted MRI has high sensitivity in detecting cerebral microbleeds, which appear as small dot-like hypointense lesions. Microbleeds are strongly associated with intracerebral haemorrhage, hypertension, lacunar stroke and ischaemic small vessel disease, and have generated interest as a marker of bleeding-prone microangiopathy. Microbleeds have generally been considered to be clinically silent; however, since they are located in widespread cortical and basal ganglia regions and are histologically characterized by tissue damage, we hypothesized that they would cause cognitive dysfunction. We therefore studied patients with microbleeds (n = 25) and a non-microbleed control group (n = 30) matched for age, gender and intelligence quotient. To avoid the confounding effects of coexisting cerebrovascular disease, the groups were also matched for the extent of MRI-visible white matter changes of presumed ischaemic origin, location of cortical strokes, and for the proportion of patients with different stroke subtypes (including lacunar stroke). A battery of neuropsychological tests was used to assess current intellectual function, verbal and visual memory, naming and perceptual skills, speed and attention and executive function. Microbleeds were most common in the basal ganglia but were also found in frontal, parieto-occipital, temporal and infratentorial regions. There was a striking difference between the groups in the prevalence of executive dysfunction, which was present in 60% of microbleed patients compared with 30% of non-microbleed patients (P = 0.03). Logistic regression confirmed that microbleeds (but not white matter changes) were an independent predictor of executive impairment (adjusted odds ratio = 1.32, 95% confidence interval 1.01-1.70, P = 0.04). Patients with executive dysfunction had more microbleeds in the frontal region (mean count 1.54 versus 0.03; P = 0.002) and in the basal ganglia (mean 1.17 versus 0.32; P = 0.048). There was a modest correlation between the number of microbleeds and the number of cognitive domains impaired (r = 0.44, P = 0.03). This study provides novel evidence that microbleeds are associated with cognitive dysfunction, independent of the extent of white matter changes of presumed ischaemic origin, or the presence of ischaemic stroke. The striking effect of microbleeds on executive dysfunction is likely to result from associated tissue damage in the frontal lobes and basal ganglia. These findings have implications for the diagnosis of stroke patients with cognitive impairment, and for the appropriate use of antihypertensive and antiplatelet treatments in these patients

Nucleon axial form factors from two-flavour Lattice QCD

We present preliminary results on the axial form factor $G_A(Q^2)$ and the induced pseudoscalar form factor $G_P(Q^2)$ of the nucleon. A systematic analysis of the excited-state contributions to form factors is performed on the CLS ensemble `N6' with $m_\pi = 340 \ \text{MeV}$ and lattice spacing $a \sim 0.05 \ \text{fm}$. The relevant three-point functions were computed with source-sink separations ranging from $t_s \sim 0.6 \ \text{fm}$ to $t_s \sim \ 1.4 \ \text{fm}$. We observe that the form factors suffer from non-trivial excited-state contributions at the source-sink separations available to us. It is noted that naive plateau fits underestimate the excited-state contributions and that the method of summed operator insertions correctly accounts for these effects.Comment: 7 pages, 12 figures; talk presented at Lattice 2014 -- 32nd International Symposium on Lattice Field Theory, 23-28 June, 2014, Columbia University New York, N

Plant functional types and elevated CO2: A method of scanning for causes of community alteration

In this paper, a general method for an a posteriori plant functional type (PFT) analysis of global change effects on community composition is developed. We apply the method to a case study, specifically the Giessen-FACE experiment. This experiment involves a Central European meadow that has been exposed to moderate CO2-enrichment since May 1998.The method for an a posteriori PFT-analysis: The method consists of four working steps and uses a combination of standard gradient analysis and Random Forests (RF). (1) The trait composition of the species is studied using Principal Components Analysis. Species trait information is gathered from databases. Natural PFT, i.e. groups of species with similar trait-sets, are identified specifically for the community under study. (2) A ranking of the species according to standardized/absolute CO2 abundance response is obtained from Redundancy Analysis. Initially, species with a response above or below the median are grouped into three response groups (RG) each having similar behaviour, i.e. positive/negative or no-response. (3) The outlyingness measure of RF is used to shift RG boundaries until satisfactory RG homogeneity is achieved. RF is utilized to find the best traits for the RG classification. The behaviour of species representative of the RG is derived from RF class centers. (4) From knowledge gained in steps 1-3, hypotheses about the causes underlying the community alteration are built. Strengths/weaknesses of the method are discussed.Application of the method to the case study: The community consists of three natural PFT. Five species are summer-green forbs of varying competitiveness. Four species are evergreen ruderal forbs characterized as (semi-) basal rosette plants. The third natural PFT contains evergreen, more or less competitive species, mostly grasses, but also a few forbs.Negative standardized CO2-response was practically restricted to two natural PFT, i.e. the summer-greens, irrespective of their competitiveness, and the evergreen ruderals. Standard positive response covered part of the evergreen competitive natural PFT. Among them was Glechoma hederacea, one of the forbs with the greatest similarity to grasses. Two hypotheses were formulated to explain the response pattern: (1) Summer-greens lost in competition with evergreens, because the annual time-integral they can use for enhanced growth was more limited with year-round CO2-enrichment. (2) As rosette plants, ruderal evergreens lagged behind evergreen competitors because periods with full sunlight, which enabled them to gain additional carbon, were shorter for them.Absolute responses were additionally dependent on dominance patterns. The most striking difference to standard responses was the restriction of positive response to (sub-)dominant grasses

A branch-point approximant for the equation of state of hard spheres

Using the first seven known virial coefficients and forcing it to possess two branch-point singularities, a new equation of state for the hard-sphere fluid is proposed. This equation of state predicts accurate values of the higher virial coefficients, a radius of convergence smaller than the close-packing value, and it is as accurate as the rescaled virial expansion and better than the Pad\'e [3/3] equations of state. Consequences regarding the convergence properties of the virial series and the use of similar equations of state for hard-core fluids in $d$ dimensions are also pointed out.Comment: 6 pages, 4 tables, 3 figures; v2: enlarged version, extension to other dimensionalities; v3: typos in references correcte

Nucleon electromagnetic form factors in two-flavour QCD

We present results for the nucleon electromagnetic form factors, including the momentum transfer dependence and derived quantities (charge radii and magnetic moment). The analysis is performed using O(a) improved Wilson fermions in Nf=2 QCD measured on the CLS ensembles. Particular focus is placed on a systematic evaluation of the influence of excited states in three-point correlation functions, which lead to a biased evaluation, if not accounted for correctly. We argue that the use of summed operator insertions and fit ans\"atze including excited states allow us to suppress and control this effect. We employ a novel method to perform joint chiral and continuum extrapolations, by fitting the form factors directly to the expressions of covariant baryonic chiral effective field theory. The final results for the charge radii and magnetic moment from our lattice calculations include, for the first time, a full error budget. We find that our estimates are compatible with experimental results within their overall uncertainties.Comment: 22 pages, 10 figures, citations modifie

On the relevance of polyynyl-substituted PAHs to astrophysics

We report on the absorption spectra of the polycyclic aromatic hydrocarbon (PAH) molecules anthracene, phenanthrene, and pyrene carrying either an ethynyl (-C2H) or a butadiynyl (-C4H) group. Measurements were carried out in the mid infrared at room temperature on grains embedded in CsI pellets and in the near ultraviolet at cryogenic temperature on molecules isolated in Ne matrices. The infrared measurements show that interstellar populations of polyynyl-substituted PAHs would give rise to collective features in the same way non-substituted PAHs give rise to the aromatic infrared bands. The main features characteristic of the substituted molecules correspond to the acetylenic CH stretching mode near 3.05 mum and to the almost isoenergetic acetylenic CCH in- and out-of-plane bending modes near 15.9 mum. Sub-populations defined by the length of the polyynyl side group cause collective features which correspond to the various acetylenic CC stretching modes. The ultraviolet spectra reveal that the addition of an ethynyl group to a non-substituted PAH molecule results in all its electronic transitions being redshifted. Due to fast internal energy conversion, the bands at shorter wavelengths are significantly broadened. Those at longer wavelengths are only barely affected in this respect. As a consequence, their relative peak absorption increases. The substitution with the longer butadiynyl chain causes the same effects with a larger magnitude, resulting in the spectra to show a prominent if not dominating pi-pi* transition at long wavelength. After discussing the relevance of polyynyl-substituted PAHs to astrophysics, we conclude that this class of highly conjugated, unsaturated molecules are valid candidates for the carriers of the diffuse interstellar bands.Comment: 29 pages, 9 figures, accepted for publication in ApJ 2 April 201

Institute of Ion Beam Physics and Materials Research: Annual Report 2001

Summary of the scientific activities of the institute in 2001 including selected highlight reports, short research contributions and an extended statistics overview