Silicon abundance from RESIK solar flare observations

The RESIK instrument on the CORONAS-F spacecraft obtained solar flare and active region X-ray spectra in four channels covering the wavelength range 3.8 -- 6.1 \AA in its operational period between 2001 and 2003. Several highly ionized silicon lines were observed within the range of the long-wavelength channel (5.00 -- 6.05 \AA). The fluxes of the \sixiv Ly-$\beta$ line (5.217 \AA) and the \sixiii $1s^2 - 1s3p$ line (5.688 \AA) during 21 flares with optimized pulse-height analyzer settings on RESIK have been analyzed to obtain the silicon abundance relative to hydrogen in flare plasmas. As in previous work, the emitting plasma for each spectrum is assumed to be characterized by a single temperature and emission measure given by the ratio of emission in the two channels of GOES. The silicon abundance is determined to be $A({\rm Si}) = 7.93 \pm .21$ (\sixiv) and $7.89 \pm .13$ (\sixiii) on a logarithmic scale with H = 12. These values, which vary by only very small amounts from flare to flare and times within flares, are $2.6 \pm 1.3$ and $2.4 \pm 0.7$ times the photospheric abundance, and are about a factor of three higher than RESIK measurements during a period of very low activity. There is a suggestion that the Si/S abundance ratio increases from active regions to flares.Comment: To be published, Solar Physic

Protein search for multiple targets on DNA

Protein-DNA interactions are crucial for all biological processes. One of the most important fundamental aspects of these interactions is the process of protein searching and recognizing specific binding sites on DNA. A large number of experimental and theoretical investigations have been devoted to uncovering the molecular description of these phenomena, but many aspects of the mechanisms of protein search for the targets on DNA remain not well understood. One of the most intriguing problems is the role of multiple targets in protein search dynamics. Using a recently developed theoretical framework we analyze this question in detail. Our method is based on a discrete-state stochastic approach that takes into account most relevant physical-chemical processes and leads to fully analytical description of all dynamic properties. Specifically, systems with two and three targets have been explicitly investigated. It is found that multiple targets in most cases accelerate the search in comparison with a single target situation. However, the acceleration is not always proportional to the number of targets. Surprisingly, there are even situations when it takes longer to find one of the multiple targets in comparison with the single target. It depends on the spatial position of the targets, distances between them, average scanning lengths of protein molecules on DNA, and the total DNA lengths. Physical-chemical explanations of observed results are presented. Our predictions are compared with experimental observations as well as with results from a continuum theory for the protein search. Extensive Monte Carlo computer simulations fully support our theoretical calculations

RESIK observations of He-like Ar X-ray line emission in solar flares

The Ar XVII X-ray line group principally due to transitions 1s2 - 1s2l (l=s, p) near 4 Anstroms was observed in numerous flares by the RESIK bent crystal spectrometer aboard CORONAS-F between 2001 and 2003. The three line features include the Ar XVII w (resonance line), a blend of x and y (intercombination lines), and z (forbidden line), all of which are blended with Ar XVI dielectronic satellites. The ratio G, equal to [I(x+y) + I(z)]/I(w), varies with electron temperature Te mostly because of unresolved dielectronic satellites. With temperatures estimated from GOES X-ray emission, the observed G ratios agree fairly well with those calculated from CHIANTI and other data. With a two-component emission measure, better agreement is achieved. Some S XV and S XVI lines blend with the Ar lines, the effect of which occurs at temperatures greater than 8MK, allowing the S/Ar abundance ratio to be determined. This is found to agree with coronal values. A nonthermal contribution is indicated for some spectra in the repeating-pulse flare of 2003 February 6.Comment: Latex file and 3 ps files. Astrophysical Journal Letters (accepted, June 2008

Mathematical Aspects of Quantum Theory*

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A solar spectroscopic absolute abundance of argon from RESIK

Observations of He-like and H-like Ar (Ar XVII and Ar XVIII) lines at 3.949 Angstroms and 3.733 Angstroms respectively with the RESIK X-ray spectrometer on the CORONAS-F spacecraft, together with temperatures and emission measures from the two channels of GOES, have been analyzed to obtain the abundance of Ar in flare plasmas in the solar corona. The line fluxes per unit emission measure show a temperature dependence like that predicted from theory, and lead to spectroscopically determined values for the absolute Ar abundance, A(Ar) = 6.44 pm 0.07 (Ar XVII) and 6.49 pm 0.16 (Ar XVIII) which are in agreement to within uncertainties. The weighted mean is 6.45 pm 0.06, which is between two recent compilations of the solar Ar abundance and suggest that the photospheric and coronal abundances of Ar are very similar.Comment: 4 figure

The Solar Flare Iron Abundance

The abundance of iron is measured from emission line complexes at 6.65 keV (Fe line) and 8 keV (Fe/Ni line) in {\em RHESSI} X-ray spectra during solar flares. Spectra during long-duration flares with steady declines were selected, with an isothermal assumption and improved data analysis methods over previous work. Two spectral fitting models give comparable results, viz. an iron abundance that is lower than previous coronal values but higher than photospheric values. In the preferred method, the estimated Fe abundance is $A({\rm Fe}) = 7.91 \pm 0.10$ (on a logarithmic scale, with $A({\rm H}) = 12$), or $2.6 \pm 0.6$ times the photospheric Fe abundance. Our estimate is based on a detailed analysis of 1,898 spectra taken during 20 flares. No variation from flare to flare is indicated. This argues for a fractionation mechanism similar to quiet-Sun plasma. The new value of $A({\rm Fe})$ has important implications for radiation loss curves, which are estimated.Comment: Accepted by Astrophysical Journa

Implementation of the 64-meter-diameter Antennas at the Deep Space Stations in Australia and Spain

The management and construction aspects of the Overseas 64-m Antenna Project in which two 64-m antennas were constructed at the Tidbinbilla Deep Space Communications Complex in Australia, and at the Madrid Deep Space Communications Complex in Spain are described. With the completion of these antennas the Deep Space Network is equipped with three 64-m antennas spaced around the world to maintain continuous coverage of spacecraft operations. These antennas provide approximately a 7-db gain over the capabilities of the existing 26-m antenna nets. The report outlines the project organization and management, resource utilization, fabrication, quality assurance, and construction methods by which the project was successfully completed. Major problems and their solutions are described as well as recommendations for future projects

Sequence Heterogeneity Accelerates Protein Search for Targets on DNA

The process of protein search for specific binding sites on DNA is fundamentally important since it marks the beginning of all major biological processes. We present a theoretical investigation that probes the role of DNA sequence symmetry, heterogeneity and chemical composition in the protein search dynamics. Using a discrete-state stochastic approach with a first-passage events analysis, which takes into account the most relevant physical-chemical processes, a full analytical description of the search dynamics is obtained. It is found that, contrary to existing views, the protein search is generally faster on DNA with more heterogeneous sequences. In addition, the search dynamics might be affected by the chemical composition near the target site. The physical origins of these phenomena are discussed. Our results suggest that biological processes might be effectively regulated by modifying chemical composition, symmetry and heterogeneity of a genome.Comment: 10 pages, 5 figure

Highly Ionized Potassium Lines in Solar X-ray Spectra and the Abundance of Potassium

The abundance of potassium is derived from X-ray lines observed during flares by the RESIK instrument on the solar mission CORONAS-F between 3.53 A and 3.57 A. The lines include those emitted by He-like K and Li-like K dielectronic satellites, which have been synthesized using the CHIANTI atomic code and newly calculated atomic data. There is good agreement of observed and synthesized spectra, and the theoretical behavior of the spectra with varying temperature estimated from the ratio of the two GOES channels is correctly predicted. The observed fluxes of the He-like K resonance line per unit emission measure gives log A(K) = 5.86 (on a scale log A(H) = 12), with a total range of a factor 2.9. This is higher than photospheric abundance estimates by a factor 5.5, a slightly greater enhancement than for other elements with first ionization potential (FIP) less than about 10 eV. There is, then, the possibility that enrichment of low-FIP elements in coronal plasmas depends weakly on the value of the FIP which for K is extremely low (4.34 eV). Our work also suggests that fractionation of elements to form the FIP effect occurs in the low chromosphere rather than higher up, as in some models.Comment: 14 pages, 3 figure