Arabidopsis DOF Transcription Factors Act Redundantly to Reduce CONSTANS Expression and Are Essential for a Photoperiodic Flowering Response

SummaryFlowering of Arabidopsis is induced by long summer days (LDs). The transcriptional regulator CONSTANS (CO) promotes flowering, and its transcription is increased under LDs. We systematically misexpressed transcription factors in companion cells and identified several DOF proteins that delay flowering by repressing CO transcription. Combining mutations in four of these, including CYCLING DOF FACTOR 2 (CDF2), caused photoperiod-insensitive early flowering by increasing CO mRNA levels. CO transcription is promoted to differing extents by GIGANTEA (GI) and the F-box protein FKF1. We show that GI stabilizes FKF1, thereby reducing CDF2 abundance and allowing transcription of CO. Despite the crucial function of GI in wild-type plants, introducing mutations in the four DOF-encoding genes into gi mutants restored the diurnal rhythm and light inducibility of CO. Thus, antagonism between GI and DOF transcription factors contributes to photoperiodic flowering by modulating an underlying diurnal rhythm in CO transcript levels

Epigenomic Modifications Predict Active Promoters and Gene Structure in Toxoplasma gondii

Mechanisms of gene regulation are poorly understood in Apicomplexa, a phylum that encompasses deadly human pathogens like Plasmodium and Toxoplasma. Initial studies suggest that epigenetic phenomena, including histone modifications and chromatin remodeling, have a profound effect upon gene expression and expression of virulence traits. Using the model organism Toxoplasma gondii, we characterized the epigenetic organization and transcription patterns of a contiguous 1% of the T. gondii genome using custom oligonucleotide microarrays. We show that methylation and acetylation of histones H3 and H4 are landmarks of active promoters in T. gondii that allow us to deduce the position and directionality of gene promoters with >95% accuracy. These histone methylation and acetylation “activation” marks are strongly associated with gene expression. We also demonstrate that the pattern of histone H3 arginine methylation distinguishes certain promoters, illustrating the complexity of the histone modification machinery in Toxoplasma. By integrating epigenetic data, gene prediction analysis, and gene expression data from the tachyzoite stage, we illustrate feasibility of creating an epigenomic map of T. gondii tachyzoite gene expression. Further, we illustrate the utility of the epigenomic map to empirically and biologically annotate the genome and show that this approach enables identification of previously unknown genes. Thus, our epigenomics approach provides novel insights into regulation of gene expression in the Apicomplexa. In addition, with its compact genome, genetic tractability, and discrete life cycle stages, T. gondii provides an important new model to study the evolutionarily conserved components of the histone code

LUCI onboard Lagrange, the Next Generation of EUV Space Weather Monitoring

LUCI (Lagrange eUv Coronal Imager) is a solar imager in the Extreme UltraViolet (EUV) that is being developed as part of the Lagrange mission, a mission designed to be positioned at the L5 Lagrangian point to monitor space weather from its source on the Sun, through the heliosphere, to the Earth. LUCI will use an off-axis two mirror design equipped with an EUV enhanced active pixel sensor. This type of detector has advantages that promise to be very beneficial for monitoring the source of space weather in the EUV. LUCI will also have a novel off-axis wide field-of-view, designed to observe the solar disk, the lower corona, and the extended solar atmosphere close to the Sun-Earth line. LUCI will provide solar coronal images at a 2-3 minute cadence in a pass-band centred on 19.5 nm. Observations made through this pass-band allow for the detection and monitoring of semi-static coronal structures such as coronal holes, prominences, and active regions; as well as transient phenomena such as solar flares, limb Coronal Mass Ejections (CMEs), EUV waves, and coronal dimmings. The LUCI data will complement EUV solar observations provided by instruments located along the Sun-Earth line such as PROBA2-SWAP, SUVI-GOES and SDO-AIA, as well as provide unique observations to improve space weather forecasts. Together with a suite of other remote-sensing and in-situ instruments onboard Lagrange, LUCI will provide science quality operational observations for space weather monitoring

3D evolution of a filament disappearance event observed by STEREO

A filament disappearance event was observed on 22 May 2008 during our recent campaign JOP 178. The filament, situated in the southern hemisphere, showed sinistral chirality consistent with the hemispheric rule. The event was well observed by several observatories in particular by THEMIS. One day before the disappearance, H$\alpha$ observations showed up and down flows in adjacent locations along the filament, which suggest plasma motions along twisted flux rope. THEMIS and GONG observations show shearing photospheric motions leading to magnetic flux canceling around barbs. STEREO A, B spacecraft with separation angle 52.4 degrees, showed quite different views of this untwisting flux rope in He II 304 \AA\ images. Here, we reconstruct the 3D geometry of the filament during its eruption phase using STEREO EUV He II 304 \AA\ images and find that the filament was highly inclined to the solar normal. The He II 304 \AA\ movies show individual threads, which oscillate and rise to an altitude of about 120 Mm with apparent velocities of about 100 km s$^{-1}$, during the rapid evolution phase. Finally, as the flux rope expands into the corona, the filament disappears by becoming optically thin to undetectable levels. No CME was detected by STEREO, only a faint CME was recorded by LASCO at the beginning of the disappearance phase at 02:00 UT, which could be due to partial filament eruption. Further, STEREO Fe XII 195 \AA\ images showed bright loops beneath the filament prior to the disappearance phase, suggesting magnetic reconnection below the flux rope

Prominence eruption observed in He II 304 Å up to >6 R⊙ by EUI/FSI aboard Solar Orbiter⋆

Aims. We report observations of a unique, large prominence eruption that was observed in the He II 304 Å passband of the Extreme Ultraviolet Imager/Full Sun Imager telescope aboard Solar Orbiter on 15–16 February 2022. Methods. Observations from several vantage points – Solar Orbiter, the Solar-Terrestrial Relations Observatory, the Solar and Heliospheric Observatory, and Earth-orbiting satellites – were used to measure the kinematics of the erupting prominence and the associated coronal mass ejection. Three-dimensional reconstruction was used to calculate the deprojected positions and speeds of different parts of the prominence. Observations in several passbands allowed us to analyse the radiative properties of the erupting prominence. Results. The leading parts of the erupting prominence and the leading edge of the corresponding coronal mass ejection propagate at speeds of around 1700 km s−1 and 2200 km s−1, respectively, while the trailing parts of the prominence are significantly slower (around 500 km s−1). Parts of the prominence are tracked up to heights of over 6 R⊙. The He II emission is probably produced via collisional excitation rather than scattering. Surprisingly, the brightness of a trailing feature increases with height. Conclusions. The reported prominence is the first observed in He II 304 Å emission at such a great height (above 6 R⊙)

First perihelion of EUI on the Solar Orbiter mission

CONTEXT: The Extreme Ultraviolet Imager (EUI) on board Solar Orbiter consists of three telescopes: the two High Resolution Imagers, in EUV (HRIEUV) and in Lyman-α (HRILya), and the Full Sun Imager (FSI). Solar Orbiter/EUI started its Nominal Mission Phase on 2021 November 27. AIMS: Our aim is to present the EUI images from the largest scales in the extended corona off-limb down to the smallest features at the base of the corona and chromosphere. EUI is therefore a key instrument for the connection science that is at the heart of the Solar Orbiter mission science goals. METHODS: The highest resolution on the Sun is achieved when Solar Orbiter passes through the perihelion part of its orbit. On 2022 March 26, Solar Orbiter reached, for the first time, a distance to the Sun close to 0.3 au. No other coronal EUV imager has been this close to the Sun. RESULTS: We review the EUI data sets obtained during the period 2022 March–April, when Solar Orbiter quickly moved from alignment with the Earth (2022 March 6), to perihelion (2022 March 26), to quadrature with the Earth (2022 March 29). We highlight the first observational results in these unique data sets and we report on the in-flight instrument performance. CONCLUSIONS: EUI has obtained the highest resolution images ever of the solar corona in the quiet Sun and polar coronal holes. Several active regions were imaged at unprecedented cadences and sequence durations. We identify in this paper a broad range of features that require deeper studies. Both FSI and HRIEUV operated at design specifications, but HRILya suffered from performance issues near perihelion. We conclude by emphasizing the EUI open data policy and encouraging further detailed analysis of the events highlighted in this paper

EUV fine structure and variability associated with coronal rain revealed by Solar Orbiter/EUI HRIEUV and SPICE

Coronal rain is the most dramatic cooling phenomenon of the solar corona and an essential diagnostic tool for the coronal heating properties. A puzzling feature of the solar corona, besides the heating, is its EUV filamentary structure and variability. We aim to identify observable features of the TNE-TI scenario underlying coronal rain at small and large spatial scales, to understand the role it plays in the solar corona. We use EUV datasets at unprecedented spatial resolution of ~240 km from EUI/HRIEUV and SPICE of Solar Orbiter from the spring 2022 perihelion. EUV absorption features produced by coronal rain are detected at scales as small as 260 km. As the rain falls, heating and compression is produced immediately downstream, leading to a small EUV brightening accompanying the fall and producing a "fireball" phenomenon. Just prior to impact, a flash-like EUV brightening downstream of the rain, lasting a few minutes is observed for the fastest events. For the first time, we detect the atmospheric response to the rain's impact on the chromosphere and consists of upward propagating rebound shocks and flows partly reheating the loop. The observed widths of the rain clumps are 500 +- 200 km. They exhibit a broad velocity distribution of 10 - 150 km s^-1, peaking below 50 km s^-1. Coronal strands of similar widths are observed along the same loops co-spatial with cool filamentary structure, which we interpret as the CCTR. Matching with the expected cooling, prior to the rain appearance sequential loop brightenings are detected in gradually cooler lines from corona to chromospheric temperatures. Despite the large rain showers, most cannot be detected in AIA 171 in quadrature, indicating that LOS effects play a major role in coronal rain visibility. Still, AIA 304 and SPICE observations reveal that only a small fraction of the rain can be captured by HRIEUV.Comment: Astronomy & Astrophysics; 32 Pages, 24 Main Figures, Appendi

Extreme-ultraviolet fine structure and variability associated with coronal rain revealed by Solar Orbiter/EUI HRIEUV and SPICE

CONTEXT: Coronal rain is the most dramatic cooling phenomenon of the solar corona. Recent observations in the visible and UV spectrum have shown that coronal rain is a pervasive phenomenon in active regions. Its strong link with coronal heating through the thermal non-equilibrium (TNE) a-thermal instability (TI) scenario makes it an essential diagnostic tool for the heating properties. Another puzzling feature of the solar corona in addition to the heating is its filamentary structure and variability, particularly in the extreme UV (EUV). AIMS: We aim to identify observable features of the TNE-TI scenario underlying coronal rain at small and large spatial scales to understand the role it plays in the solar corona. METHODS: We used EUV datasets at an unprecedented spatial resolution of 240 km from the High Resolution Imager (HRI) in the EUV (HRIEUV) of the Extreme Ultraviolet Imager (EUI) and SPICE on board Solar Orbiter from the perihelion in March and April 2022. RESULTS: EUV absorption features produced by coronal rain are detected at scales as small as 260 km. As the rain falls, heating and compression is produced immediately downstream, leading to a small EUV brightening that accompanies the fall and produces a fireball phenomenon in the solar corona. Just prior to impact, a flash-like EUV brightening downstream of the rain, lasting a few minutes, is observed for the fastest events. For the first time, we detect the atmospheric response to the impact of the rain on the chromosphere, and it consists of upward-propagating rebound shocks and flows that partly reheat the loop. The observed widths of the rain clumps are 500a-±a-200 km. They exhibit a broad velocity distribution of 10a-a-A-150 km sa-1and peak below 50 km sa-1. Coronal strands of similar widths are observed along the same loops. They are co-spatial with cool filamentary structure seen with SPICE, which we interpret as the condensation corona transition region. Prior to the appearance of the rain, sequential loop brightenings are detected in gradually cooler lines from coronal to chromospheric temperatures. This matches the expected cooling. Despite the large rain showers, most cannot be detected in AIA 171 in quadrature, indicating that line-of-sight effects play a major role in the visibility of coronal rain. The AIA 304 and SPICE observations still reveal that only a small fraction of the rain can be captured by HRIEUV. CONCLUSIONS: Coronal rain generates EUV structure and variability over a wide range of scales, from coronal loops to the smallest resolvable scales. This establishes the major role that TNE-TI plays in the observed EUV morphology and variability of the corona

Beyond the disk: EUV coronagraphic observations of the Extreme Ultraviolet Imager on board Solar Orbiter

Context. Most observations of the solar corona beyond 2 R consist of broadband visible light imagery carried out with coronagraphs. The associated diagnostics mainly consist of kinematics and derivations of the electron number density. While the measurement of the properties of emission lines can provide crucial additional diagnostics of the coronal plasma (temperatures, velocities, abundances, etc.), these types of observations are comparatively rare. In visible wavelengths, observations at these heights are limited to total eclipses. In the ultraviolet (UV) to extreme UV (EUV) range, very few additional observations have been achieved since the pioneering results of the Ultraviolet Coronagraph Spectrometer (UVCS). Aims. One of the objectives of the Full Sun Imager (FSI) channel of the Extreme Ultraviolet Imager (EUI) on board the Solar Orbiter mission has been to provide very wide field-of-view EUV diagnostics of the morphology and dynamics of the solar atmosphere in temperature regimes that are typical of the lower transition region and of the corona. Methods. FSI carries out observations in two narrowbands of the EUV spectrum centered on 17.4 nm and 30.4 nm that are dominated, respectively, by lines of FeIX/X (formed in the corona around 1 MK) and by the resonance line of HeII (formed around 80 kK in the lower transition region). Unlike previous EUV imagers, FSI includes a moveable occulting disk that can be inserted in the optical path to reduce the amount of instrumental stray light to a minimum. Results. FSI detects signals at 17.4 nm up to the edge of its field of view (7 R), which is about twice further than was previously possible. Operation at 30.4 nm are for the moment compromised by an as-yet unidentified source of stray light. Comparisons with observations by the LASCO and Metis coronagraphs confirm the presence of morphological similarities and differences between the broadband visible light and EUV emissions, as documented on the basis of prior eclipse and space-based observations. Conclusions. The very-wide-field observations of FSI out to about 3 and 7 R, without and with the occulting disk, respectively, are paving the way for future dedicated instruments

Beyond the disk: EUV coronagraphic observations of the Extreme Ultraviolet Imager on board Solar Orbiter

Most observations of the solar corona beyond 2 Rs consist of broadband visible light imagery from coronagraphs. The associated diagnostics mainly consist of kinematics and derivations of the electron number density. While the measurement of the properties of emission lines can provide crucial additional diagnostics of the coronal plasma (temperatures, velocities, abundances, etc.), these observations are comparatively rare. In visible wavelengths, observations at these heights are limited to total eclipses. In the VUV range, very few additional observations have been achieved since the pioneering results of UVCS. One of the objectives of the Full Sun Imager (FSI) channel of the EUI telescope on board the Solar Orbiter mission has been to provide very wide field-of-view EUV diagnostics of the morphology and dynamics of the solar atmosphere in temperature regimes that are typical of the lower transition region and of the corona. FSI carries out observations in two narrowbands of the EUV spectrum centered on 17.4 nm and 30.4 nm that are dominated, respectively, by lines of Fe IX/X (formed in the corona around 1 MK) and by the resonance line of He II (formed around 80 kK in the lower transition region). Unlike previous EUV imagers, FSI includes a moveable occulting disk that can be inserted in the optical path to reduce the amount of instrumental stray light to a minimum. FSI detects signals at 17.4 nm up to the edge of its FOV (7~Rs), which is about twice further than was previously possible. Comparisons with observations by the LASCO and Metis coronagraphs confirm the presence of morphological similarities and differences between the broadband visible light and EUV emissions, as documented on the basis of prior eclipse and space-based observations. The very-wide-field observations of FSI are paving the way for future dedicated instruments