Expression of a rice chitinase gene in transgenic banana (''Gros Michel'', AAA genome group) confers resistance to black leaf streak disease

Transgenic banana (Musa acuminata 'Gros Michel') integrating either of two rice chitinase genes was generated and its resistance to Black Leaf Streak disease caused by the fungus Mycosphaerella fijiensis was tested using a leaf disk bioassay. PCR screening indicated the presence of the hpt selectable marker gene in more than 90 % of the lines tested, whereas more than three quarters of the lines contained the linked rice chitinase gene resulting in a co-transformation frequency of at least 71.4 %. Further, a unique stable integration of the transgenes in each line revealed some false negative PCR results and the expected co-transformation frequency of 100 %

Consistent Group and Coset Reductions of the Bosonic String

Dimensional reductions of pure Einstein gravity on cosets other than tori are inconsistent. The inclusion of specific additional scalar and p-form matter can change the situation. For example, a D-dimensional Einstein-Maxwell-dilaton system, with a specific dilaton coupling, is known to admit a consistent reduction on S^2= SU(2)/U(1), of a sort first envisaged by Pauli. We provide a new understanding, by showing how an S^3=SU(2) group-manifold reduction of (D+1)-dimensional Einstein gravity, of a type first indicated by DeWitt, can be broken into in two steps; a Kaluza-type reduction on U(1) followed by a Pauli-type coset reduction on S^2. More generally, we show that any D-dimensional theory that itself arises as a Kaluza U(1) reduction from (D+1) dimensions admits a consistent Pauli reduction on any coset of the form G/U(1). Extensions to the case G/H are given. Pauli coset reductions of the bosonic string on G= (G\times G)/G are believed to be consistent, and a consistency proof exists for S^3=SO(4)/SO(3). We examine these reductions, and arguments for consistency, in detail. The structures of the theories obtained instead by DeWitt-type group-manifold reductions of the bosonic string are also studied, allowing us to make contact with previous such work in which only singlet scalars are retained. Consistent truncations with two singlet scalars are possible. Intriguingly, despite the fact that these are not supersymmetric models, if the group manifold has dimension 3 or 25 they admit a superpotential formulation, and hence first-order equations yielding domain-wall solutions.Comment: Latex, 5 figures, 45 pages, minor correction

Kaluza-Klein and Gauss-Bonnet cosmic strings

We make a systematic investigation of stationary cylindrically symmetric solutions to the five-dimensional Einstein and Einstein-Gauss-Bonnet equations. Apart from the five-dimensional neutral cosmic string metric, we find two new exact solutions which qualify as cosmic strings, one corresponding to an electrically charged cosmic string, the other to an extended superconducting cosmic string surrounding a charged core. In both cases, test particles are deflected away from the singular line source. We extend both kinds of solutions to exact multi-cosmic string solutions.Comment: 26 pages, LaTex, no figure

Seroprevalence of bovine herpesvirus 1 related alphaherpesvirus infections in free-living and captive cervids in Poland.

To determine the occurrence of bovine herpesvirus 1 (BoHV-1) related alphaherpesvirus infections in cervids, 1194 serum samples of wild ruminants originating from 59 forest districts of Poland were tested with IBR gB ELISA and virus neutralization test (VNT) against BoHV-1 and cervid herpesvirus 1 (CvHV-1). The seroprevalence differed significantly between free-living and captive cervids (P<0.001) with a total of 89 out of 498 (17.9%) and 268 out of 696 (38.5%) seropositive animals in each type of population. In free-ranging cervids, the highest seroprevalence was found among red deer (25.6%) and in fallow deer (23.1%), while it was the lowest in roe deer (1.7%). The seroprevalence varied at the district level between 0 and 100% with the mean value of 17.4% (95% CI:10.1-24.0). Additionally, seroprevalence was associated with afforestation (chi(2)=7.5; P=0.006) and to some degree with the mean of cattle density in province (chi(2)=7.0; P=0.08). The mean antibody titre against CvHV-1 in VNT (161.8; 95%CI: 146.0-177.6) has been significantly higher (P<0.0001) than the mean titre of BoHV-1 antibodies (10.1; 95%CI: 8.9-11.4). The results showed that BoHV-1 related alphaherpesvirus infections are present in population of free-ranging and farmed cervids in Poland. Based on the VNT results and considering the low susceptibility of red deer to BoHV-1, it seems that the dominant alphaherpesvirus circulating in wild ruminants is most likely CvHV-1 and therefore it is rather unlikely that deer in Poland could play any role as a reservoir of BoHV-1 for cattle

Structural basis for distinctive recognition of fibrinogen γC peptide by the platelet integrin αIIbβ3

Hemostasis and thrombosis (blood clotting) involve fibrinogen binding to integrin αIIbβ3 on platelets, resulting in platelet aggregation. αvβ3 binds fibrinogen via an Arg-Asp-Gly (RGD) motif in fibrinogen's α subunit. αIIbβ3 also binds to fibrinogen; however, it does so via an unstructured RGD-lacking C-terminal region of the γ subunit (γC peptide). These distinct modes of fibrinogen binding enable αIIbβ3 and αvβ3 to function cooperatively in hemostasis. In this study, crystal structures reveal the integrin αIIbβ3–γC peptide interface, and, for comparison, integrin αIIbβ3 bound to a lamprey γC primordial RGD motif. Compared with RGD, the GAKQAGDV motif in γC adopts a different backbone configuration and binds over a more extended region. The integrin metal ion–dependent adhesion site (MIDAS) Mg2+ ion binds the γC Asp side chain. The adjacent to MIDAS (ADMIDAS) Ca2+ ion binds the γC C terminus, revealing a contribution for ADMIDAS in ligand binding. Structural data from this natively disordered γC peptide enhances our understanding of the involvement of γC peptide and integrin αIIbβ3 in hemostasis and thrombosis

Approche formelle de fusion d'ontologies à l'aide des grammaires de graphes typés

L'article propose une approche formelle de fusion d'ontologies se reposant sur les grammaires de graphes typés. Elle se décompose en trois étapes : 1) la recherche de similarités entre concepts ; 2) la fusion des ontologies par l'approche algébrique SPO (Simple Push Out) ; 3) l'adaptation d'une ontologie globale par le biais de règles de réécriture de graphes. Contrairement aux solutions existantes, cette méthode offre une représentation formelle de la fusion d'ontologies ainsi qu'une implémentation fonctionnelle basée sur l'outil AGG

Algebraic graph transformations for formalizing ontology changes and evolving ontologies

An ontology represents a consensus on the representation of the concepts and axioms of a given domain. This consensus is often reached through an iterative process, each iteration consisting in modifying the current version of the consensus. Furthermore, frequent and continuous changes are also occurring when the represented domain evolves or when new requirements have to be considered. Consequently, ontologies have to be adaptable to handle evolution, revision and refinement. However, this process is highly challenging as it is often difficult to understand all affected ontology parts when changes are performed. Thus, inconsistencies can occur in the ontology as the changes can introduce contradictory axioms. To address this issue, this paper presents a formal approach for evolving ontologies using Typed Graph Grammars. This method relies on the algebraic approach Simple PushOut (SPO) of graph transformations. It formalizes the ontology changes and proposes an a priori approach of inconsistencies resolution. The modified ontology does not need an explicit checking as an incorrect ontology version cannot actually be generated. To validate our proposal, an implementation is presented using the Attributed Graph Grammar (AGG) toolbox