165 research outputs found

    Dispersion pattern and sampling plan for Asian citrus psyllid, Diaphorina citri Kuwayama (Hemiptera: Psyllidae) in a citrus orchard

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    The ecology of the psyllid and its spatial distribution as the basis for the development of a reliable sampling plan are very important. The abundance and spatial distribution of Diaphorina citri (Hemiptera: Psyllidae) were studied in a commercial citrus orchard in southwestern Sarawak, Malaysia from April 2013 to December 2014. The spatial distribution of D. citri eggs, nymphs and adults were analysed using Taylor’s power law and Iwao’s patchiness regression. Taylor’s power law fitted the data better and produced higher values of R2 than Iwao’s regression model but did not work well with the egg populations. Based on both regression models, the field dispersion patterns of D. citri eggs, nymphs and adults were aggregated among flush shoots in individual trees as indicated by the regression slopes that were significantly >1. By homogeneity tests on both regression methods, the slopes of Taylor’s power law and Iwao’s regression model did not differ significantly for the D. citri population on honey tangerine for both years. The minimum number of flush shoots per tree required for estimates of D. citri densities varied from 2, 4 and 6 flush shoots for adults, nymphs and eggs, respectively, for the average density of each developmental stage obtained during our studies. Prediction suggested that a sampling plan consisting of 10 trees with the optimum number of six flush shoots per tree was required for a reasonably accurate density estimation of the three life stages of D. citri acceptable enough for population studies and pest management program in citrus orchards

    Distribution patterns of Diaphorina citri Kuwayama (Hemiptera: Psyllidae) eggs, nymphs and adults in a Malaysian citrus orchard

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    Spatial distribution of eggs, nymphs and adults of Diaphorina citri (Hemiptera: Psyllidae) was studied in a commercial orchard in SW Sarawak, Malaysia, using mean–variance test, the index of dispersion, and the negative binomial distribution. To further ascertain and confirm the distribution pattern in the population of the psyllid, dispersion indices (index of mean crowding, Lloyd’s index of patchiness, Taylor’s power law and Iwao’s patchiness regression) were calculated. Measurable tests showed that distribution of eggs and nymphs in naturally occurring psyllid populations was highly aggregated, resulting from initially aggregated migration of adults and a contagious dispersion of them on flushes as the population density increased of metals in the present study can be used as suitable reference for future studies

    Incidence and spread of huanglongbing (HLB) or citrus greening disease in relation to the distribution and fluctuation of Diaphorina citri Kuwayama (Hemiptera: Psyllidae) population in a citrus orchard in Sarawak, Malaysia

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    Diaphorina citri Kuwayama is a very prolific and most efficient vector for the fast huanglonbing (HLB) transmission which has destroyed nearly all citrus orchards with the economic deficit of RM 6.5 million or USD 1.6 million in Malaysia. D. citri coupled with HLB is therefore the greatest obstacle to the financial development of a sustainable and viable citrus industry in Malaysia. The study was aimed to evaluate the spread of HLB disease vectored by D. citri in relation to its spatial distribution and flight activity in response to flush cycles in a healthy orchard. Four types of yellow traps used to monitor for flight activity of this disease vector were evaluated monthly between June 2011 and December 2012. Both vector populations and HLB disease symptoms were monitored regularly between 2011 and 2014. A molecular diagnostic technique, Polymerase chain reaction (PCR) procedures was used to confirm the presence of the bacterium in diseased trees. D. citri adult populations expanded exponentially amid durations of cyclic production of new flush growths. The highest number of adult D. citri was captured by Rebel brown-yellow traps followed by Bamboo pole and yellow sticky traps with significant differences during the rainy months with monthly rainfall between 581-919 mm from October 2011 to March 2012 while higher catches were obtained by Bamboo pole traps during the dry months with monthly rainfall from 374-458 mm between May – September 2012. Yellow traps provided an indication of adult abundance and flight activity. It took about 21 months for D. citri population to spread all over the entire citrus garden. Rates of HLB transmission were related to high vector populations and spread was related to dispersing adults. Levels of HLB infected trees as determined by PCR increased progressively from 2.4% to 19.3% and 42.2% within four years after planting. The activity of infective D. citri is the key to HLB disease spread in a citrus orchard

    Horizontal Gene Acquisitions, Mobile Element Proliferation, and Genome Decay in the Host-Restricted Plant Pathogen \u3ci\u3eErwinia Tracheiphila\u3c/i\u3e

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    Modern industrial agriculture depends on high-density cultivation of genetically similar crop plants, creating favorable conditions for the emergence of novel pathogens with increased fitness in managed compared with ecologically intact settings. Here, we present the genome sequence of six strains of the cucurbit bacterial wilt pathogen Erwinia tracheiphila (Enterobacteriaceae) isolated from infected squash plants in New York, Pennsylvania, Kentucky, and Michigan. These genomes exhibit a high proportion of recent horizontal gene acquisitions, invasion and remarkable amplification of mobile genetic elements, and pseudogenization of approximately 20% of the coding sequences. These genome attributes indicate that E. tracheiphila recently emerged as a host-restricted pathogen. Furthermore, chromosomal rearrangements associated with phage and transposable element proliferation contribute to substantial differences in gene content and genetic architecture between the six E. tracheiphila strains and other Erwinia species. Together, these data lead us to hypothesize that E. tracheiphila has undergone recent evolution through both genome decay (pseudogenization) and genome expansion (horizontal gene transfer and mobile element amplification). Despite evidence of dramatic genomic changes, the six strains are genetically monomorphic, suggesting a recent population bottleneck and emergence into E. tracheiphila’s current ecological niche

    A DNA nanoswitch incorporating the fluorescent base analogue 2-aminopurine detects single nucleotide mismatches in unlabelled targets

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    DNA nanoswitches can be designed to detect unlabelled nucleic acid targets and have been shown to discriminate between targets which differ in the identity of only one base. This paper demonstrates that the fluorescent base analogue 2-aminopurine (AP) can be used to discriminate between nanoswitches with and without targets and to discriminate between matched and mismatched targets. In particular, we have used both steady-state and time-resolved fluorescence spectroscopy to determine differences in AP environment at the branchpoint of nanoswitches assembled using complementary targets and targets which incorporate single base mismatches

    The associations between body and knee height measurements and knee joint structure in an asymptomatic cohort

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    <p>Abstract</p> <p>Background</p> <p>It has been suggested that knee height is a determinant of knee joint load. Nonetheless, no study has directly examined the relationship between anthropometric measures of height and knee joint structures, such as cartilage.</p> <p>Methods</p> <p>89 asymptomatic community-based adults aged 25-62 with no diagnosed history of knee arthropathy were recruited. Anthropometric data (knee height and body height) were obtained by standard protocol, while tibial cartilage volume and defects, as well as bone area were determined from magnetic resonance imaging. Static knee alignment was measured from the joint radiograph.</p> <p>Results</p> <p>All anthropometric height measures were associated with increasing compartmental tibial bone area (<it>p </it>≤ 0.05). Although knee height was associated with tibial cartilage volume (e.g. β = 27 mm<sup>3 </sup>95% CI 7- 48; <it>p </it>= 0.009 for the medial compartment), these relationship no longer remained significant when knee height as a percentage of body height was analysed. Knee height as a percentage of body height was associated with a reduced risk of medial tibial cartilage defects (odds ratio 0.6; 95% confidence interval 0.4 - 1.0; <it>p </it>= 0.05).</p> <p>Conclusion</p> <p>The association between increased anthropometric height measures and increased tibial bone area may reflect inherently larger bony structures. However the beneficial associations demonstrated with cartilage morphology suggest that an increased knee height may confer a beneficial biomechanical environment to the chondrocyte of asymptomatic adults.</p

    Environmental Factors in the Relapse and Recurrence of Inflammatory Bowel Disease:A Review of the Literature

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    The causes of relapse in patients with Crohn's disease (CD) and ulcerative colitis (UC) are largely unknown. This paper reviews the epidemiological and clinical data on how medications (non-steroidal anti-inflammatory drugs, estrogens and antibiotics), lifestyle factors (smoking, psychological stress, diet and air pollution) may precipitate clinical relapses and recurrence. Potential biological mechanisms include: increasing thrombotic tendency, imbalances in prostaglandin synthesis, alterations in the composition of gut microbiota, and mucosal damage causing increased permeability

    The SDF-1α/CXCR4 Axis is Required for Proliferation and Maturation of Human Fetal Pancreatic Endocrine Progenitor Cells

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    The chemokine receptor CXCR4 and ligand SDF-1α are expressed in fetal and adult mouse islets. Neutralization of CXCR4 has previously been shown to diminish ductal cell proliferation and increase apoptosis in the IFNγ transgenic mouse model in which the adult mouse pancreas displays islet regeneration. Here, we demonstrate that CXCR4 and SDF-1α are expressed in the human fetal pancreas and that during early gestation, CXCR4 colocalizes with neurogenin 3 (ngn3), a key transcription factor for endocrine specification in the pancreas. Treatment of islet like clusters (ICCs) derived from human fetal pancreas with SDF-1α resulted in increased proliferation of epithelial cells in ICCs without a concomitant increase in total insulin expression. Exposure of ICCs in vitro to AMD3100, a pharmacological inhibitor of CXCR4, did not alter expression of endocrine hormones insulin and glucagon, or the pancreatic endocrine transcription factors PDX1, Nkx6.1, Ngn3 and PAX4. However, a strong inhibition of β cell genesis was observed when in vitro AMD3100 treatment of ICCs was followed by two weeks of in vivo treatment with AMD3100 after ICC transplantation into mice. Analysis of the grafts for human C-peptide found that inhibition of CXCR4 activity profoundly inhibits islet development. Subsequently, a model pancreatic epithelial cell system (CFPAC-1) was employed to study the signals that regulate proliferation and apoptosis by the SDF-1α/CXCR4 axis. From a selected panel of inhibitors tested, both the PI 3-kinase and MAPK pathways were identified as critical regulators of CFPAC-1 proliferation. SDF-1α stimulated Akt phosphorylation, but failed to increase phosphorylation of Erk above the high basal levels observed. Taken together, these results indicate that SDF-1α/CXCR4 axis plays a critical regulatory role in the genesis of human islets
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