118 research outputs found
Novel bioactive tetracycline-containing electrospun polymer fibers as a potential antibacterial dental implant coating
The purpose of this investigation was to determine the ability of tetracycline-containing fibers to inhibit biofilm formation of peri-implantitis-associated pathogens [i.e., Porphyromonas gingivalis (Pg), Fusobacterium nucleatum (Fn), Prevotella intermedia (Pi), and Aggregatibacter actinomycetemcomitans (Aa)]. Tetracycline hydrochloride (TCH) was added to a poly(DL-lactide) [PLA], poly(ε-caprolactone) [PCL], and gelatin [GEL] polymer blend solution at distinct concentrations to obtain the following fibers: PLA:PCL/GEL (TCH-free, control), PLA:PCL/GEL + 5 % TCH, PLA:PCL/GEL + 10 % TCH, and PLA:PCL/GEL + 25 % TCH. The inhibitory effect of TCH-containing fibers on biofilm formation was assessed by colony-forming units (CFU/mL). Qualitative analysis of biofilm inhibition was done via scanning electron microscopy (SEM). Statistical significance was reported at p < 0.05. Complete inhibition of biofilm formation on the fibers was observed in groups containing TCH at 10 and 25 wt%. Fibers containing TCH at 5 wt% demonstrated complete inhibition of Aa biofilm. Even though a marked reduction in CFU/mL was observed with an increase in TCH concentration, Pi proved to be the most resilient microorganism. SEM images revealed the absence of or a notable decrease in bacterial biofilm on the TCH-containing nanofibers. Collectively, our data suggest that tetracycline-containing fibers hold great potential as an antibacterial dental implant coating
Monocyte biology conserved across species: Functional insights from cattle.
Similar to human monocytes, bovine monocytes can be split into CD14highCD16- classical, CD14highCD16high intermediate and CD14-/dimCD16high nonclassical monocytes (cM, intM, and ncM, respectively). Here, we present an in-depth analysis of their steady-state bulk- and single-cell transcriptomes, highlighting both pronounced functional specializations and transcriptomic relatedness. Bulk gene transcription indicates pro-inflammatory and antibacterial roles of cM, while ncM and intM appear to be specialized in regulatory/anti-inflammatory functions and tissue repair, as well as antiviral responses and T-cell immunomodulation. Notably, intM stood out by high expression of several genes associated with antigen presentation. Anti-inflammatory and antiviral functions of ncM are further supported by dominant oxidative phosphorylation and selective strong responses to TLR7/8 ligands, respectively. Moreover, single-cell RNA-seq revealed previously unappreciated heterogeneity within cM and proposes intM as a transient differentiation intermediate between cM and ncM
Acoustic resonances in microfluidic chips: full-image micro-PIV experiments and numerical simulations
We show that full-image micro-PIV analysis in combination with images of
transient particle motion is a powerful tool for experimental studies of
acoustic radiation forces and acoustic streaming in microfluidic chambers under
piezo-actuation in the MHz range. The measured steady-state motion of both
large 5 um and small 1 um particles can be understood in terms of the acoustic
eigenmodes or standing ultra-sound waves in the given experimental
microsystems. This interpretation is supported by numerical solutions of the
corresponding acoustic wave equation.Comment: RevTex, 10 pages, 9 eps figures; NOTE first authors changed his name
to S. Melker Hagsater in the published versio
Tetracycline-incorporated polymer nanofibers as a potential dental implant surface modifier
This study investigated the antimicrobial and osteogenic properties of titanium (Ti) disks superficially modified with tetracycline (TCH)-incorporated polymer nanofibers. The experiments were carried out in two phases. The first phase dealt with the synthesis and characterization (i.e., morphology, mechanical strength, drug release, antimicrobial activity, and cytocompatibility) of TCH-incorporated fibers. The second phase was dedicated to evaluating both the antimicrobial and murine-derived osteoprecursor cell (MC3T3-E1) response of Ti-modified with TCH-incorporated fibers. TCH was successfully incorporated into the submicron-sized and cytocompatible fibers. All TCH-incorporated mats presented significant antimicrobial activity against periodontal pathogens. The antimicrobial potential of the TCH-incorporated fibers-modified Ti was influenced by both the TCH concentration and bacteria tested. At days 5 and 7, a significant increase in MC3T3-E1 cell number was observed for TCH-incorporated nanofibers-modified Ti disks when compared to that of TCH-free nanofibers-modified Ti-disks and bare Ti. A significant increase in alkaline phosphatase (ALP) levels on the Ti disks modified with TCH-incorporated nanofiber on days 7 and 14 was seen, suggesting that the proposed surface promotes early osteogenic differentiation. Collectively, the data suggest that TCH-incorporated nanofibers could function as an antimicrobial surface modifier and osteogenic inducer for Ti dental implants
Monocyte biology conserved across species: Functional insights from cattle
Similar to human monocytes, bovine monocytes can be split into CD14highCD16- classical, CD14highCD16high intermediate and CD14-/dimCD16high nonclassical monocytes (cM, intM, and ncM, respectively). Here, we present an in-depth analysis of their steady-state bulk- and single-cell transcriptomes, highlighting both pronounced functional specializations and transcriptomic relatedness. Bulk gene transcription indicates pro-inflammatory and antibacterial roles of cM, while ncM and intM appear to be specialized in regulatory/anti-inflammatory functions and tissue repair, as well as antiviral responses and T-cell immunomodulation. Notably, intM stood out by high expression of several genes associated with antigen presentation. Anti-inflammatory and antiviral functions of ncM are further supported by dominant oxidative phosphorylation and selective strong responses to TLR7/8 ligands, respectively. Moreover, single-cell RNA-seq revealed previously unappreciated heterogeneity within cM and proposes intM as a transient differentiation intermediate between cM and ncM
Formation and interactions of cold and ultracold molecules: new challenges for interdisciplinary physics
Progress on researches in the field of molecules at cold and ultracold
temperatures is reported in this review. It covers extensively the experimental
methods to produce, detect and characterize cold and ultracold molecules
including association of ultracold atoms, deceleration by external fields and
kinematic cooling. Confinement of molecules in different kinds of traps is also
discussed. The basic theoretical issues related to the knowledge of the
molecular structure, the atom-molecule and molecule-molecule mutual
interactions, and to their possible manipulation and control with external
fields, are reviewed. A short discussion on the broad area of applications
completes the review.Comment: to appear in Reports on Progress in Physic
Tidal propagation in strongly convergent channels
Simple first‐ and second‐order analytic solutions, which diverge markedly from classical views of cooscillating tides, are derived for tidal propagation in strongly convergent channels. Theoretical predictions compare well with observations from typical examples of shallow, “funnel‐shaped” tidal estuaries. A scaling of the governing equations appropriate to these channels indicates that at first order, gradients in cross‐sectional area dominate velocity gradients in the continuity equation and the friction term dominates acceleration in the momentum equation. Finite amplitude effects, velocity gradients due to wave propagation, and local acceleration enter the equations at second order. Applying this scaling, the first‐order governing equation becomes a first‐order wave equation, which is inconsistent with the presence of a reflected wave. The solution is of constant amplitude and has a phase speed near the frictionless wave speed, like a classical progressive wave, yet velocity leads elevation by 90°, like a classical standing wave. The second‐order solution at the dominant frequency is also a unidirectional wave; however, its amplitude is exponentially modulated. If inertia is finite and convergence is strong, amplitude increases along channel, whereas if inertia is weak and convergence is limited, amplitude decays. Compact solutions for second‐order tidal harmonics quantify the partially canceling effects of (1) time variations in channel depth, which slow the propagation of low water, and (2) time variations in channel width, which slow the propagation of high water. Finally, it is suggested that phase speed, along‐channel amplitude growth, and tidal harmonics in strongly convergent channels are all linked by morphodynamic feedback
The impact of glacier geometry on meltwater plume structure and submarine melt in Greenland fjords
Meltwater from the Greenland Ice Sheet often drains subglacially into fjords, driving upwelling plumes at glacier termini. Ocean models and observations of submarine termini suggest that plumes enhance melt and undercutting, leading to calving and potential glacier destabilization. Here we systematically evaluate how simulated plume structure and submarine melt during summer months depends on realistic ranges of subglacial discharge, glacier depth, and ocean stratification from 12 Greenland fjords. Our results show that grounding line depth is a strong control on plume-induced submarine melt: deep glaciers produce warm, salty subsurface plumes that undercut termini, and shallow glaciers produce cold, fresh surface-trapped plumes that can overcut termini. Due to sustained upwelling velocities, plumes in cold, shallow fjords can induce equivalent depth-averaged melt rates compared to warm, deep fjords. These results detail a direct ocean-ice feedback that can affect the Greenland Ice Sheet
Towards an integrated observation and modeling system in the New York Bight using variational methods. Part I : 4DVAR data assimilation
Author Posting. © The Author(s), 2010. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Ocean Modelling 35 (2010): 119-133, doi:10.1016/j.ocemod.2010.08.003.Four-dimensional Variational data assimilation (4DVAR) in the Regional Ocean
Modeling System (ROMS) is used to produce a best-estimate analysis of ocean
circulation in the New York Bight during spring 2006 by assimilating observations
collected by a variety of instruments during an intensive field program. An incremental
approach is applied in an overlapped cycling system with 3-day data assimilation window
to adjust model initial conditions. The model-observation mismatch for all observed
variables is reduced substantially. Comparisons between model forecast and independent
observations show improved forecast skill for about 15 days for temperature and salinity,
and 2 to 3 days for velocity. Tests assimilating only certain subsets of the data indicate
that assimilating satellite sea surface temperature improves the forecast of surface and
subsurface temperature but worsens the salinity forecast. Assimilating in situ
temperature and salinity from gliders improves the salinity forecast but has little effect on
temperature. Assimilating HF-radar surface current data improves the velocity forecast
by 1-2 days yet worsens the forecast of subsurface temperature. During some time
periods the convergence for velocity is poor as a result of the data assimilation system
being unable to reduce errors in the applied winds because surface forcing is not among
the control variables. This study demonstrates the capability of 4DVAR data assimilation
system to reduce model-observation mismatch and improve forecasts in the coastal ocean,
and highlights the value of accurate meteorological forcing.This work was funded by National Science Foundation grant OCE-0238957
A Cytoplasmic Complex Mediates Specific mRNA Recognition and Localization in Yeast
The localization of ash mRNA in yeast requires the binding of She2p and the myosin adaptor protein She3p to its localization element, which is highly specific and leads to the assembly of stable transport complexes
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