Petrographical and Mineralogical Applications of Raman Mapping

Raman spectroscopy has undergone rapid development over the last few decades. The ability to acquire a spectrum in only a few tens of milliseconds allows use of Raman mapping as a routine technique. However, with respect to classical single spectrum measurement, this technique is not still as widely used as it could be, in particular for mineralogy and petrography. Here, we explain the advantages of Raman mapping for obtaining additional information compared to single spot analyses. The principle and the limits of the technique are first explained in 2D and 3D. Data processing techniques are then described using different types of rocks and minerals to demonstrate the utility of Raman mapping for obtaining information about the general composition, identification of small phases, as well as for distinguishing minerals that are spectrally very close. More “exotic” uses of the collected signal are also described. Finally, a gallery of images from representative samples is used to illustrate the discussion

Scanning Electron Microscopy Investigation of a Sample Depth Profile Through the Martian Meteorite Nakhla

The ongoing scientific debate as to whether or not the Martian meteorite ALH84001 contained evidence of possible biogenic activities showed the need to establish consistent methods to ascertain the origin of such evidence. To distinguish between terrestrial organic material/microbial contaminants and possible indigenous microbiota within meteorites is therefore crucial. With this in mind a depth profile consisting of four samples from a new sample allocation of Martian meteorite Nakhla was investigated using scanning electron microscopy (SEM) and energy dispersive X-ray analysis. SEM imaging of freshly broken fractured chips revealed structures strongly recent terrestrial microorganisms, in some cases showing evidence of active growth. This conclusion was supported by EDX analysis, which showed the presence of carbon associated with these structures, we concluded that these structures represent recent terrestrial contaminants rather than structures indigenous to the meteorite. Pag

Phosphate Biomineralization of Cambrian Microorganisms

As part of a long term study of biological markers (biomarkers), we are documenting a variety of features which reflect the previous presence of living organisms. As we study meteorites and samples returned from Mars, our main clue to recognizing possible microbial material may be the presence of biomarkers rather than the organisms themselves. One class of biomarkers consists of biominerals which have either been precipitated directly by microorganisms, or whose precipitation has been influenced by the organisms. Such microbe-mediated mineral formation may include important clues to the size, shape, and environment of the microorganisms. The process of fossilization or mineralization can cause major changes in morphologies and textures of the original organisms. The study of fossilized terrestrial organisms can help provide insight into the interpretation of mineral biomarkers. This paper describes the results of investigations of microfossils in Cambrian phosphate-rich rocks (phosphorites) that were found in Khubsugul, Northern Mongolia

Metamorphic evolution of carbonate-hosted microbial biosignatures

This work was funded by a Royal Society of Edinburgh Research Fellowship. FF and FW acknowledge funding from the CNRS and CNES.Microbial biosignature assemblages captured within mineral substrates experience extreme pressures (P) and temperatures (T) during rock burial and metamorphism. We subjected natural microbial biofilms hosted within thermal spring carbonate to six high pressure, high temperature (HPHT) conditions spanning 500 and 800 MPa and 200 to 550 °C, to investigate the initial petrographic transformation of organic and inorganic phases. We find biogenic and amorphous silica mineralises increasingly mature organic matter (OM) as temperature and pressure increase, with OM expelled from recrystallised calcite at the highest HPHT, captured within a quartz phase. Sulfur globules associated with microbial filaments persist across all HPHT conditions in association with microbially-derived kerogen. These data demonstrate how microbial material captured within chemically-precipitated sediments petrographically evolves in high grade rocks during their first stages of transformation.Publisher PDFPeer reviewe

The European Space Analogue Rock Collection (ESAR) at the OSUC-Orleans for in situ planetary missions

International audienceThe ESAR is a collection of well-characterised planetary analogue rocks and minerals that can be used for testing in situ instrumentation for planetary exploration. An online database of all relevant structural, compositional and geotechnics information is also available to the instrument teams and to aid data interpretation during missions

MINERALIZATION AND POTENTIAL FOR FOSSILIZATION OF AN EXTREMOTOLERANT BACTERIUM ISOLATED FROM A PAST MARS ANALOG ENVIRONMENT

Introduction: Several decades dedicated to the study of Mars has enabled scientists to understand that, during its history, environmental conditions on early Mars strongly contrasted with the present-day conditions, hostile for life. Indeed, previous (Mars Express, Viking…) and more recent (MSL) missions confirmed that liquid water, heat (volcan-ism, hydrothermalism), organic matter, and redox conditions probably occurred on the planet, thus enabling scientists to seriously consider early Mars as being habitable ans suitable for the emergence of Martian life [1]. However, the detection of past life on Mars, if it existed, also requires that biomarkers (i) be preserved over geological time scales and that (ii) they remained detectable. Therefore, as terrestrial analogues for Mars, astrobiologists are addressing questions related to microbial adaptation, lifestyles and survival in extraterrestrial environments [2]. In this context, the European MASE project (Mars Ana-logues for Space Exploration) aims at better understand-ing habitability, microbial lifestyles and biomarker preservation in such environmental analogues. To do this, one of the goals of MASE is to better characterize the evolution and preservation of diverse biomarkers during the microbial fossilization process [3]

Habitability on Early Mars and the Search for Biosignatures with the ExoMars Rover

The second ExoMars mission will be launched in 2020 to target an ancient location interpreted to have strong potential for past habitability and for preserving physical and chemical biosignatures (as well as abiotic/prebiotic organics). The mission will deliver a lander with instruments for atmospheric and geophysical investigations and a rover tasked with searching for signs of extinct life. The ExoMars rover will be equipped with a drill to collect material from outcrops and at depth down to 2 m. This subsurface sampling capability will provide the best chance yet to gain access to chemical biosignatures. Using the powerful Pasteur payload instruments, the ExoMars science team will conduct a holistic search for traces of life and seek corroborating geological context information. Key Words: Biosignatures—ExoMars—Landing sites—Mars rover—Search for life. Astrobiology 17, 471–510

Detecting biochemical evidence for life with the signs of life detector (solid) in an anaerobic microorganism under fossilization conditions

The definitive detection of biosignatures in the context of astrobiological missions to Mars is not without difficulty. Could it be possible to detect biomarkers from an extinct form of life in a very ancient material? The traces of some microorganisms can be well preserved thanks to rapid mineralization of the organisms and cementation of the sediments in which they occur [1]. Thus biosignatures could be indicators of either extant or extinct life, the search for which is one of the main objectives of Mars exploration [1]. The central motivation of the MASE project (Mars Analogues for Space Exploration) is to gain knowledge about the habitability of Mars by the study of the adaptation of anaerobic life forms to extreme environments, their environmental context, and the methods used to detect their biosignatures. Within this background a fundamental target of MASE project is to improve and optimize methods for biosignature detection in samples with low biomass from certain Mars analogue sites. In this context we applied antibody multiarray competitive immunoassay to follow the evolution of specific biochemical signatures from a culture under fossilization conditions. An antibody multiarray competitive immunoassay for the simultaneous detection of compounds of a wide range of molecular sizes or whole spores and cells [2] [3] has revealed as suitable option to achieve this MASE purpose. It consists in a rapid strategy to detect a huge set of different epitopes in extracted samples by a sandwich multiarray immunoassay in a slide or LDChip (Life Detector Chip) where huge range of different antibodies are coated. In this report, we present the results from an experiment in which we followed the biochemical signatures from a growing culture of an isolate of Yersinia sp. in fresh media and in a culture growing under fossilization conditions in silica and gypsum. A decrease in the signal of relative fluorescence of antibody-antigen binding (biomarkers detected) is observed when comparing an untreated Yersinia sp. culture and those induced to mineralization at different time points

The CaliPhoto Method

International audienceWe propose an innovative method based on photography and image processing of interdisciplinary relevance, permitting the uncomplicated and inexpensive evaluation of material properties. This method-CaliPhoto-consists of using a dedicated colour plate with a specific design, placed in the field of view of a photograph of the material to be characterized. A specific image processing workflow is then applied to obtain colour vectors independent of illumination conditions. The method works using commercial colour cameras (e.g., smartphone cameras), and the colour plate can be printed on any colour printer. Herein, we describe the principle of the method and demonstrate that it can be used to describe and compare samples, identify materials or make relatively precise concentration measurements. The CaliPhoto method is highly complementary to any scientific research and may find applications across a range of domains, from planetary science to oceanography. The method may also be widely used in industry

Archean (3.33 Ga) microbe-sediment systems were diverse and flourished in a hydrothermal context

International audienceInteracting, diverse microbe-sediment systems exist in natural environments today but have not yet been recognized in the oldest records of life on Earth (older than 3.3 Ga) because of lack of distinctive biomarker molecules and patchy preservation of microbial paleocommunities. In an in-situ outcrop-to microbial-scale study, we have differentiated probable phototrophic, chemolithotrophic, and chemo-organotrophic fossil microbial signatures in a nearshore vol-canogenic sedimentary setting in 3.33 Ga rocks of the Josefsdal Chert, Barberton greenstone belt, South Africa, while demonstrating the importance of contemporaneous hydrothermal activity. Hydrothermal fluids, as a nutrient source, strongly controlled the development and distribution of the microbial communities and, as a silicifying agent, contributed to their rapid fossilization. We thus show that intricate microbe-sediment systems are deep-rooted in time and that at least some early life may indeed have been thermophilic. INTRODUCTION Microbial communities in natural environments exist as multispecies assemblages that interact directly with one another and with their surroundings, and thus can be viewed as distinctive systems (Nealson, 1997). For example, a wide diversity of organotrophic and lithotro-phic (chemotrophic) microorganisms has been described in present-day, carbon-rich hydrother-mally influenced basaltic sediments (Callac et al., 2013), similar to those described from early Earth. However, lack of specific biomarker preservation in very ancient rocks (Summons, 1993) and haphazard preservation of microbial communities in general (Campbell et al., 2001; Orange et al., 2009) make tracing such systems in fossilized form to the oldest records of life on Earth (early Archean, older than 3.3 Ga) very challenging. Nevertheless, phototrophic microbial communities in early to mid-Archean (ca. 3.5–3.2 Ga) strata of South Africa and Australia have been well documented (). On the other hand, no previous investigations have recognized and addressed the syngenetic diversity of Archean microbial paleocommunities—both phototrophs and che-motrophs —within their sedimentary habitats at the microbial scale and using in-situ methods. Here we describe a macroscopic to microscopic investigation of the sedimentary and geochemical settings of widespread, fossilized phototrophic and chemotrophic microorganisms in early to mid-Archean (3.33 Ga) coastal sediments from the Josefsdal Chert, Barberton greenstone belt, South Africa. We also emphasize the importance of contemporaneous hydrothermal activity both as a source of energy for biomass production and as the means of preserving the biosignatures