Origine, transport et devenir des apports naturels et anthropiques dans le lagon sud-ouest de Nouvelle-Calédonie

L’ird (Institut de recherche pour le développement) conduit depuis dix ans un programme pluridisciplinaire sur les effets des apports naturels et anthropiques sur le fonctionnement du lagon de Nouvelle-Calédonie. Celle-ci connaît actuellement une croissance de sa population et un développement de son industrie minière. Trois grands types d’apports sont pris en compte : les particules entraînées par l’érosion des sols et des sous-sols et dont l'accumulation brutale peut être responsable du dépôt de quantités considérables de sédiments, les métaux potentiellement toxiques pour les organismes vivant dans le lagon et les éléments nutritifs susceptibles de conduire les eaux jusqu'à l’eutrophisation (confinement chimique conduisant à l'élimination de nombreuses espèces vivantes et à la dominance d'un petit nombre d'autres). Le présent article offre trois exemples de problématiques environnementales qui n'ont pu être résolues qu’au moyen de la fédération de différentes approches de recherche complémentaires : l’influence des courants sur la dispersion des particules détritiques en provenance de l'île, le devenir des métaux dans le lagon et leur accumulation dans les organismes, les effets des apports en nutriments sur les communautés planctoniques et les risques d'eutrophisation. Les résultats de ces recherches sont présentés tout en conservant à l’esprit les objectifs nécessairement appliqués d’un programme de recherche pour le développement. Il s’agit principalement de définir les bases scientifiques permettant d’identifier certains outils de diagnostic environnemental et de développer des approches de simulation mathématique susceptibles d'offrir une vision synthétique et prévisionnelle de l’état et du devenir des environnements lagonaires sous influence anthropique.For the past ten years, the ird (Institut de recherche pour le développement) has developed a multidisciplinary programme dealing with the effects of natural and anthropogenic terrigenous inputs on the New Caledonia coral reef lagoon which is currently subjected to environmental pressure due to population increase and development of the mining industry. The ongoing study focused on three main categories of inputs: (i) particles generated by erosion processes and responsible for excessive sediment inputs in the lagoon, (ii) metals exhibiting a potentially lethal effect on the lagoon biota, (iii) nutrients responsible for eutrophication. This article presents three examples of environmental issues that could be addressed through complementary research approaches: (i) the dispersion of terrigenous inputs as commended by currents, (ii) the fate of metals in the lagoon and their accumulation in the biota, (iii) the effects of nutrient enrichment on pelagic communities. Results are presented while keeping in mind the necessary applied outcomes requested from a research programme devoted to development issues. Such outcomes are mainly related to the identification of suited environmental diagnostic tools and to the development of modelling approaches yielding synthetic and predictive information on the status and fate of coral reef lagoons subject to anthropogenic stress

Depleted dissolved organic carbon and distinct bacterial communities in the water column of a rapid-flushing coral reef ecosystem

Author Posting. © The Author(s), 2011. This is the author's version of the work. It is posted here by permission of Nature Publishing Group for personal use, not for redistribution. The definitive version was published in The ISME Journal 5 (2011): 1374–1387, doi:10.1038/ismej.2011.12.Coral reefs are highly productive ecosystems bathed in unproductive, low-nutrient oceanic waters, where microbially-dominated food webs are supported largely by bacterioplankton recycling of dissolved compounds. Despite evidence that benthic reef organisms efficiently scavenge particulate organic matter and inorganic nutrients from advected oceanic waters, our understanding of the role of bacterioplankton and dissolved organic matter in the interaction between reefs and the surrounding ocean remains limited. Here we present the results of a four-year study conducted in a well-characterized coral reef ecosystem (Paopao Bay, Moorea, French Polynesia) where changes in bacterioplankton abundance and dissolved organic carbon (DOC) concentrations were quantified and bacterial community structure variation was examined along spatial gradients of the reef:ocean interface. Our results illustrate that the reef is consistently depleted in concentrations of both DOC and bacterioplankton relative to offshore waters (averaging 79 µmol L-1 DOC and 5.5 X 108 cells L-1 offshore and 68 µmol L-1 DOC and 3.1 X 108 cells L-1 over the reef, respectively) across a four year time period. In addition, using a suite of culture-independent measures of bacterial community structure, we found consistent differentiation of reef bacterioplankton communities from those offshore or in a nearby embayment across all taxonomic levels. Reef habitats were enriched in Gamma-, Delta-, and Beta-proteobacteria, Bacteriodetes, Actinobacteria and Firmicutes. Specific bacterial phylotypes, including members of the SAR11, SAR116, Flavobacteria, and Synechococcus clades, exhibited clear gradients in relative abundance among nearshore habitats. Our observations indicate that this reef system removes oceanic DOC and exerts selective pressures on bacterioplankton community structure on timescales approximating reef water residence times, observations which are notable both because fringing reefs do not exhibit long residence times (unlike those characteristic of atoll lagoons) and because oceanic DOC is generally recalcitrant to degradation by ambient microbial assemblages. Our findings thus have interesting implications for the role of oceanic DOM and bacterioplankton in the ecology and metabolism of reef ecosystems.This project was supported by the US National Science Foundation Moorea Coral Reef Long Term Ecological Research project (NSF OCE-0417412) through minigrants to CAC and NSF OCE-0927411 to CAC as well as the MIRADA-LTERs program (NSF DEB-0717390 to LAZ)

Tracking seasonal changes in North Sea zooplankton trophic dynamics using stable isotopes

Trophodynamics of meso-zooplankton in the North Sea (NS) were assessed at a site in the southern NS, and at a shallow and a deep site in the central NS. Offshore and neritic species from different ecological niches, including Calanus spp., Temora spp. and Sagitta spp., were collected during seven cruises over 14 months from 2007 to 2008. Bulk stable isotope (SI) analysis, phospholipid-derived fatty acid (PLFA) compositions, and δ 13CPLFA data of meso-zooplankton and particulate organic matter (POM) were used to describe changes in zooplankton relative trophic positions (RTPs) and trophodynamics. The aim of the study was to test the hypothesis that the RTPs of zooplankton in the North Sea vary spatially and seasonally, in response to hydrographic variability, with the microbial food web playing an important role at times. Zooplankton RTPs tended to be higher during winter and lower during the phytoplankton bloom in spring. RTPs were highest for predators such as Sagitta sp. and Calanus helgolandicus and lowest for small copepods such as Pseudocalanus elongatus and zoea larvae (Brachyura). δ 15NPOM-based RTPs were only moderate surrogates for animals’ ecological niches, because of the plasticity in source materials from the herbivorous and the microbial loop food web. Common (16:0) and essential (eicosapentaenoic acid, EPA and docosahexaenoic acid, DHA) structural lipids showed relatively constant abundances. This could be explained by incorporation of PLFAs with δ 13C signatures which followed seasonal changes in bulk δ 13CPOM and PLFA δ 13CPOM signatures. This study highlighted the complementarity of three biogeochemical approaches for trophodynamic studies and substantiated conceptual views of size-based food web analysis, in which small individuals of large species may be functionally equivalent to large individuals of small species. Seasonal and spatial variability was also important in altering the relative importance of the herbivorous and microbial food webs

Spatial and seasonal variability of sediment oxygen consumption and nutrient fluxes at the sediment water interface in a sub-tropical lagoon (New Caledonia)

In order to quantify the spatial and seasonal variations of sediment oxygen consumption and nutrient fluxes, we performed a spatial survey in the south west lagoon of New Caledonia during the two major seasons (dry and wet) based on a network of 11 sampling stations. Stations were selected along two barrier reef to land transects representing most types of sediments encountered in the lagoon. Fluxes were measured using ex-situ sediment incubations and compared to sediment characteristics. Sediment oxygen consumption (SOC) varied between 500 and 2000 mu mol m(-2). depending on season and stations. Nutrient effluxes from sediment were highly variable with highest fluxes measured in muddy sediments near the coast. Inter-sample variability was as high as seasonal differences so that no seasonally driven temperature effect could be observed on benthic nutrient fluxes in our temperature range. Nutrient fluxes, generally directed from the sediment to the water column, varied between -5.0 and 70.0 mu mol m(-2) h(-1) for ammonia and between 2.5 and +12.5 mu mol m(-2) h(-1) for PO4 and NO2+3. SOC and nutrient fluxes were compared to pelagic primary production rates in order to highlight the tight coupling existing between the benthic and pelagic compartments in this shallow tropical lagoon. Under specific occasions of low pelagic productivity, oxygen sediment consumption and related carbon and nutrient fluxes could balance nearly all net primary production in the lagoon. These biogeochemical estimates point to the functional importance of sediment biogeochemistry in the lagoon of New Caledonia. (C) 2010 Elsevier Ltd. All rights reserved

Tropical lagoon multidisciplinary investigations: An overview of the PNEC New Caledonia pilot site.

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Human impact on atolls leads to coral loss and community homogenisation : a modeling study

We explore impacts on pristine atolls subjected to anthropogenic near-field (human habitation) and far-field (climate and environmental change) pressure. Using literature data of human impacts on reefs, we parameterize forecast models to evaluate trajectories in coral cover under impact scenarios that primarily act via recruitment and increased mortality of larger corals. From surveys across the Chagos, we investigate the regeneration dynamics of coral populations distant from human habitation after natural disturbances. Using a size-based mathematical model based on a time-series of coral community and population data from 1999–2006, we provide hind- and forecast data for coral population dynamics within lagoons and on ocean-facing reefs verified against monitoring from 1979–2009. Environmental data (currents, temperatures) were used for calibration. The coral community was simplified into growth typologies: branching and encrusting, arboresent and massive corals. Community patterns observed in the field were influenced by bleaching-related mortality, most notably in 1998. Survival had been highest in deep lagoonal settings, which suggests a refuge. Recruitment levels were higher in lagoons than on ocean-facing reefs. When adding stress by direct human pressure, climate and environmental change as increased disturbance frequency and modified recruitment and mortality levels (due to eutrophication, overfishing, pollution, heat, acidification, etc), models suggest steep declines in coral populations and loss of community diversification among habitats. We found it likely that degradation of lagoonal coral populations would impact regeneration potential of all coral populations, also on ocean-facing reefs, thus decreasing reef resilience on the entire atoll