1,218 research outputs found
Nonlinear Kinetic Energy Harvesting
Abstract Harvesting of kinetic energy present in the form of random vibrations is an interesting option due to the almost universal presence of this kind of motion. Traditional generators based on piezoelectric effect are built with linear oscillators made by a piezoelectric beam and a mass used to tune the resonance frequency on the predominant frequency of the vibrations spectrum. However, in most cases the ambient random vibrations have their energy distributed over a wide spectrum of frequencies, being rich especially at low frequency. Furthermore frequency tuning is not always possible due to geometrical/dynamical constraints. In this work we present a different method based on the exploitation of the nonlinear dynamical features of bistable oscillator. The experimental results and the digital simulations show that nonlinear harvester (e.g. bistable oscillators) can overcome some of the most severe limitations of generators based on linear dynamics
Thermal noise limit in the Virgo mirror suspension
Abstract The expected current limit to the Virgo sensitivity is presented. New materials to realize a low thermal noise suspension for the Virgo optics are investigated. A promising fused silica suspension for the Virgo mirrors is presented
Low-frequency internal friction in silica glass
Precise low-frequency internal friction measurements on vitreous silica, taken over a wide temperature (4 K160 K the loss angle develops a distinct step-like structure followed by a plateau, both independent of ν, thus signalling the onset of a competing relaxation mechanism with much higher an activation energy.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/58117/2/epl_80_5_50008.pd
Why Do Protein Folding Rates Correlate with Metrics of Native Topology?
For almost 15 years, the experimental correlation between protein folding rates and the contact order parameter has been under scrutiny. Here, we use a simple simulation model combined with a native-centric interaction potential to investigate the physical roots of this empirical observation. We simulate a large set of circular permutants, thus eliminating dependencies of the folding rate on other protein properties (e.g. stability). We show that the rate-contact order correlation is a consequence of the fact that, in high contact order structures, the contact order of the transition state ensemble closely mirrors the contact order of the native state. This happens because, in these structures, the native topology is represented in the transition state through the formation of a network of tertiary interactions that are distinctively long-ranged
A parallel Beowulf-based system for the detection of gravitational waves in interferometric detectors
The detection, in a modern interferometric detector like Virgo, of a gravitational wave signal from a coalescing binary stellar system is an intensive computational task both for the on-line and off-line computer systems. A parallel computing scheme using the Message Passing Interface (MPI) is described. Performance results on a small scale cluster are reported
The folding of knotted proteins: insights from lattice simulations
We carry out systematic Monte Carlo simulations of Go lattice proteins to investigate and compare the folding processes of two model proteins whose native structures differ from each other due to the presence of a trefoil knot located near the terminus of one of the protein chains. We show that the folding time of the knotted fold is larger than that of the unknotted protein and that this difference in folding time is particularly striking in the temperature region below the optimal folding temperature. Both proteins display similar folding transition temperatures, which is indicative of similar thermal stabilities. By using the folding probability reaction coordinate as an estimator of folding progression we have found out that the formation of the knot is mainly a late folding event in our shallow knot system
Pathways to folding, nucleation events and native geometry
We perform extensive Monte Carlo simulations of a lattice model and the Go
potential to investigate the existence of folding pathways at the level of
contact cluster formation for two native structures with markedly different
geometries. Our analysis of folding pathways revealed a common underlying
folding mechanism, based on nucleation phenomena, for both protein models.
However, folding to the more complex geometry (i.e. that with more non-local
contacts) is driven by a folding nucleus whose geometric traits more closely
resemble those of the native fold. For this geometry folding is clearly a more
cooperative process.Comment: Accepted in J. Chem. Phy
Interface Fluctuations under Shear
Coarsening systems under uniform shear display a long time regime
characterized by the presence of highly stretched and thin domains. The
question then arises whether thermal fluctuations may actually destroy this
layered structure. To address this problem in the case of non-conserved
dynamics we study an anisotropic version of the Burgers equation, constructed
to describe thermal fluctuations of an interface in the presence of a uniform
shear flow. As a result, we find that stretched domains are only marginally
stable against thermal fluctuations in , whereas they are stable in .Comment: 3 pages, shorter version, additional reference
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