273 research outputs found
A prospective surveillance study to determine the prevalence of 16S rRNA methyltransferase-producing Gram-negative bacteria in the UK
OBJECTIVES: To determine the prevalence of 16S rRNA methyltransferase- (16S RMTase-) producing Gram-negative bacteria in patients in the UK and to identify potential risk factors for their acquisition. METHODS: A 6 month prospective surveillance study was conducted from 1 May to 31 October 2016, wherein 14 hospital laboratories submitted Acinetobacter baumannii, Enterobacterales and Pseudomonas aeruginosa isolates that displayed high-level amikacin resistance according to their testing methods, e.g. no zone of inhibition with amikacin discs. Isolates were linked to patient travel history, medical care abroad, and previous antibiotic exposure using a surveillance questionnaire. In the reference laboratory, isolates confirmed to grow on Mueller-Hinton agar supplemented with 256 mg/L amikacin were screened by PCR for 16S RMTase genes armA, rmtA-rmtH and npmA, and carbapenemase genes (blaKPC, blaNDM, blaOXA-48-like and blaVIM). STs and total antibiotic resistance gene complement were determined via WGS. Prevalence was determined using denominators for each bacterial species provided by participating hospital laboratories. RESULTS: Eighty-four isolates (44.7%), among 188 submitted isolates, exhibited high-level amikacin resistance (MIC >256 mg/L), and 79 (94.0%) of these harboured 16S RMTase genes. armA (54.4%, 43/79) was the most common, followed by rmtB (17.7%, 14/79), rmtF (13.9%, 11/79), rmtC (12.7%, 10/79) and armA + rmtF (1.3%, 1/79). The overall period prevalence of 16S RMTase-producing Gram-negative bacteria was 0.1% (79/71 063). Potential risk factors identified through multivariate statistical analysis included being male and polymyxin use. CONCLUSIONS: The UK prevalence of 16S RMTase-producing Gram-negative bacteria is low, but continued surveillance is needed to monitor their spread and inform intervention strategies
Habitat suitability analysis for hippopotamus (H. amphibious) using GIS and remote sensing in Lake Tana and its environs, Ethiopia
Phylogenetic Codivergence Supports Coevolution of Mimetic Heliconius Butterflies
The unpalatable and warning-patterned butterflies _Heliconius erato_ and _Heliconius melpomene_ provide the best studied example of mutualistic Müllerian mimicry, thought – but rarely demonstrated – to promote coevolution. Some of the strongest available evidence for coevolution comes from phylogenetic codivergence, the parallel divergence of ecologically associated lineages. Early evolutionary reconstructions suggested codivergence between mimetic populations of _H. erato_ and _H. melpomene_, and this was initially hailed as the most striking known case of coevolution. However, subsequent molecular phylogenetic analyses found discrepancies in phylogenetic branching patterns and timing (topological and temporal incongruence) that argued against codivergence. We present the first explicit cophylogenetic test of codivergence between mimetic populations of _H. erato_ and _H. melpomene_, and re-examine the timing of these radiations. We find statistically significant topological congruence between multilocus coalescent population phylogenies of _H. erato_ and _H. melpomene_, supporting repeated codivergence of mimetic populations. Divergence time estimates, based on a Bayesian coalescent model, suggest that the evolutionary radiations of _H. erato_ and _H. melpomene_ occurred over the same time period, and are compatible with a series of temporally congruent codivergence events. This evidence supports a history of reciprocal coevolution between Müllerian co-mimics characterised by phylogenetic codivergence and parallel phenotypic change
Fluoromycobacteriophages for rapid, specific, and sensitive antibiotic susceptibility testing of Mycobacterium tuberculosis
Rapid antibiotic susceptibility testing of Mycobacterium tuberculosis is of paramount importance as multiple- and extensively- drug resistant strains of M. tuberculosis emerge and spread. We describe here a virus-based assay in which fluoromycobacteriophages are used to deliver a GFP or ZsYellow fluorescent marker gene to M. tuberculosis, which can then be monitored by fluorescent detection approaches including fluorescent microscopy and flow cytometry. Pre-clinical evaluations show that addition of either Rifampicin or Streptomycin at the time of phage addition obliterates fluorescence in susceptible cells but not in isogenic resistant bacteria enabling drug sensitivity determination in less than 24 hours. Detection requires no substrate addition, fewer than 100 cells can be identified, and resistant bacteria can be detected within mixed populations. Fluorescence withstands fixation by paraformaldehyde providing enhanced biosafety for testing MDR-TB and XDR-TB infections. © 2009 Piuri et al
Wing Patterns in the Mist
Arnaud Martin is with University of California Irvine, Durrell D. Kapan is with University of Hawaii at Manoa, Lawrence E. Gilbert is with UT Austin.The aesthetic appeal of butterfly wing patterns has been costly to their status as a tool of fundamental scientific inquiry. Thus, while mimetic convergence in wing patterns between edible “Batesian” mimics and distasteful models, or between different distasteful “Müllerian” mimics (species that cooperate to educate predators) has long been the subject of genetic analysis [1] and field experiments [2], most biology text books confine mimicry to sections on striking adaptations without applying these examples to broader topics of evolution. Meanwhile, the study of color patterns in animals, often tucked into the same sections of texts, is undergoing a revolution in this age of evo-devo and genomics [3]. Among insect models for studying color pattern, the genus Heliconius is gaining the attention of an ever-widening audience.Biological Sciences, School o
Empyema associated with community-acquired pneumonia: A Pediatric Investigator's Collaborative Network on Infections in Canada (PICNIC) study
Exploring factors that influence the spread and sustainability of a dysphagia innovation: an instrumental case study
Background: Swallowing difficulties challenge patient safety due to the increased risk of malnutrition, dehydration
and aspiration pneumonia. A theoretically driven study was undertaken to examine the spread and sustainability of
a locally developed innovation that involved using the Inter-Professional Dysphagia Framework to structure
education for the workforce. A conceptual framework with 3 spread strategies (hierarchical control, participatory
adaptation and facilitated evolution) was blended with a processual approach to sustaining organisational change.
The aim was to understand the processes, mechanism and outcomes associated with the spread and sustainability
of this safety initiative.
Methods: An instrumental case study, prospectively tracked a dysphagia innovation for 34 months (April 2011
to January 2014) in a large health care organisation in England. A train-the-trainer intervention (as participatory
adaptation) was deployed on care pathways for stroke and fractured neck of femur. Data were collected at the
organisational and clinical level through interviews (n = 30) and document review. The coding frame combined
the processual approach with the spread mechanisms. Pre-determined outcomes included the number of staff
trained about dysphagia and impact related to changes in practice.
Results: The features and processes associated with hierarchical control and participatory adaptation were
identified. Leadership, critical junctures, temporality and making the innovation routine were aspects of hierarchical
control. Participatory adaptation was evident on the care pathways through stakeholder responses, workload and
resource pressures. Six of the 25 ward based trainers cascaded the dysphagia training. The expected outcomes
were achieved when the top-down mandate (hierarchical control) was supplemented by local engagement and
support (participatory adaptation).
Conclusions: Frameworks for spread and sustainability were combined to create a ‘small theory’ that described
the interventions, the processes and desired outcomes a priori. This novel methodological approach confirmed
what is known about spread and sustainability, highlighted the particularity of change and offered new insights
into the factors associated with hierarchical control and participatory adaptation. The findings illustrate the dualities
of organisational change as universal and context specific; as particular and amendable to theoretical generalisation.
Appreciating these dualities may contribute to understanding why many innovations fail to become routine
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