Biocontrôle de la fusariose vasculaire du melon par des microorganismes marins

The aim of this work was the biocontrol of Fusarium wilt of melon by marine microorganisms. In vitro screening of fifty marine microorganisms has allowed us to select 27 active strains which eleven were identified and tested in vivo in melon seedlings infected by Fusarium oxysporum f.sp. melonis. The in vivo test was used to select a strain of Chryseomonas luteola, a strain of Pantoea spp. and two Aeromonas hydrophilastrains for biocontrol of Fusarium wilt of melon. Marine microorganisms can be an alternative to fight against phytopathogenic fungi.L’objectif de ce travail a été le biocontrôle de la fusariose vasculaire du melon par des microorganismes marins. Le criblage in vitro de cinquante microorganismes marins nous a permis de sélectionner 27 souches actives dont onze ont été identifiées et testées in vivo chez des plantules de melon infectées par Fusarium oxysporum f.sp. melonis, agent dela fusariose vasculaire. Le test in vivo a permis de sélectionner une souche de Chryseomonas luteola, une souche de Pantoea spp. et deux souches de l’espèce Aeromonas hydrophilapour le biocontrôle de la fusariose vasculaire du melon. Les microorganismes marins peuvent constituer une alternative pour lutter contre les champignons phytopathogènes

Combined assimilation of IASI and MLS observations to constrain tropospheric and stratospheric ozone in a global chemical transport model

Accurate and temporally resolved fields of free-troposphere ozone are of major importance to quantify the intercontinental transport of pollution and the ozone radiative forcing. We consider a global chemical transport model (MOdèle de Chimie Atmosphérique à Grande Échelle, MOCAGE) in combination with a linear ozone chemistry scheme to examine the impact of assimilating observations from the Microwave Limb Sounder (MLS) and the Infrared Atmospheric Sounding Interferometer (IASI). The assimilation of the two instruments is performed by means of a variational algorithm (4D-VAR) and allows to constrain stratospheric and tropospheric ozone simultaneously. The analysis is first computed for the months of August and November 2008 and validated against ozonesonde measurements to verify the presence of observations and model biases. Furthermore, a longer analysis of 6 months (July–December 2008) showed that the combined assimilation of MLS and IASI is able to globally reduce the uncertainty (root mean square error, RMSE) of the modeled ozone columns from 30 to 15% in the upper troposphere/lower stratosphere (UTLS, 70–225 hPa). The assimilation of IASI tropospheric ozone observations (1000–225 hPa columns, TOC – tropospheric O₃ column) decreases the RMSE of the model from 40 to 20% in the tropics (30° S–30° N), whereas it is not effective at higher latitudes. Results are confirmed by a comparison with additional ozone data sets like the Measurements of OZone and wAter vapour by aIrbus in-service airCraft (MOZAIC) data, the Ozone Monitoring Instrument (OMI) total ozone columns and several high-altitude surface measurements. Finally, the analysis is found to be insensitive to the assimilation parameters. We conclude that the combination of a simplified ozone chemistry scheme with frequent satellite observations is a valuable tool for the long-term analysis of stratospheric and free-tropospheric ozone

A linear CO chemistry parameterization in a chemistry-transport model: evaluation and application to data assimilation

This paper presents an evaluation of a new linear parameterization valid for the troposphere and the stratosphere, based on a first order approximation of the carbon monoxide (CO) continuity equation. This linear scheme (hereinafter noted LINCO) has been implemented in the 3-D Chemical Transport Model (CTM) MOCAGE (MOdèle de Chimie Atmospherique Grande Echelle). First, a one and a half years of LINCO simulation has been compared to output obtained from a detailed chemical scheme output. The mean differences between both schemes are about ±25 ppbv (part per billion by volume) or 15% in the troposphere and ±10 ppbv or 100% in the stratosphere. Second, LINCO has been compared to diverse observations from satellite instruments covering the troposphere (Measurements Of Pollution In The Troposphere: MOPITT) and the stratosphere (Microwave Limb Sounder: MLS) and also from aircraft (Measurements of ozone and water vapour by Airbus in-service aircraft: MOZAIC programme) mostly flying in the upper troposphere and lower stratosphere (UTLS). In the troposphere, the LINCO seasonal variations as well as the vertical and horizontal distributions are quite close to MOPITT CO observations. However, a bias of ~−40 ppbv is observed at 700 Pa between LINCO and MOPITT. In the stratosphere, MLS and LINCO present similar large-scale patterns, except over the poles where the CO concentration is underestimated by the model. In the UTLS, LINCO presents small biases less than 2% compared to independent MOZAIC profiles. Third, we assimilated MOPITT CO using a variational 3D-FGAT (First Guess at Appropriate Time) method in conjunction with MOCAGE for a long run of one and a half years. The data assimilation greatly improves the vertical CO distribution in the troposphere from 700 to 350 hPa compared to independent MOZAIC profiles. At 146 hPa, the assimilated CO distribution is also improved compared to MLS observations by reducing the bias up to a factor of 2 in the tropics. This study confirms that the linear scheme is able to simulate reasonably well the CO distribution in the troposphere and in the lower stratosphere. Therefore, the low computing cost of the linear scheme opens new perspectives to make free runs and CO data assimilation runs at high resolution and over periods of several years

COMPLICATIONS RETINIENNES DES ANTIPALUDEENS DE SYNTHESE. A PROPOS DE 2 CAS

Treatment with the antimalarials chloroquine or hydroxychloroquine is frequently used in dermatology and rheumatology. However irreversible retinal damage can occurs, that’s why intensive monitoring is still required. We report 2 cases of females patients aged of 33 and 42 years old, treated by antimalarials for polyarthritis and sclerodermia. After 4 years of treatment without ophthalmologic examination, they complain of decreased vision. The fundoscopic exam found a bilateral bull's eye appearence confirmed by fluorescein angiography. Even after cessation of treatment the visual acuity didn’t increase.Ocular toxicity of antimalarials treatment is rare but it can occurs. The retinopathy is the major concern. We found three stages: asymptomatic, obvious maculopathy and advanced retinopathy. Appropriate examinations (color vision, automatic visual field and electroretinogram) should be performed regularly. The frequency of screening should be based on patients’ classification.Les antipaludéens de synthèse sont largement utilisés en rhumatologie et en dermatologie pour leur action anti-inflammatoire. Ils exposent toute fois à des complications rétiniennes irréversibles d’où la nécessité d’une surveillance ophtalmologique régulière. Nous rapportons l’observation de deux patientes âgées de 33 et 42 ans, mises sous antipaludéens de synthèse respectivement pour une polyarthrite rhumatoïde et une sclérodermie. Elles ont poursuivies leur traitement pendant 3 à 4 ans sans surveillance ophtalmologique avant de consulter pour une baisse importante de l’acuité visuelle. L’examen ophtalmologique a retrouvé une acuité visuelle inférieure à 2/10ème dans le premier cas et une acuité visuelle inférieure à 6/10ème dans le deuxième cas ; avec au fond d’oeil un aspect de maculopathie bilatérale en oeil de boeuf typique confirmée par l’angiographie rétinienne à la fluoresceine. Malgré l’arrêt des antipaludéens de synthèse, l’acuité visuelle est restée stationnaire dans les deux cas. L’intoxication clinique aux antipaludéens de synthèse est rare mais possible. Elle prédomine dans la région maculaire et évolue en 3 stades: asymptomatique, maculopathie confirmée et stade de rétinopathie évoluée. Un bilan ophtalmologique initial doit être fait systématiquement, avant le début du traitement avec réalisation d’examens paracliniques (vision des couleurs, champs visuel automatisé, électrorétinographie maculaire). Au terme des ces examens les patients seront classés en trois groupes permettant ainsi de déterminer leur rythme de surveillance

Midlatitude stratosphere - troposphere exchange as diagnosed by MLS O3 and MOPITT CO assimilated fields

International audienceThis paper presents a comprehensive characterization of a very deep stratospheric intrusion which occurred over the British Isles on 15 August 2007. The signature of this event is diagnosed using ozonesonde measurements over Lerwick, UK (60.14 N, 1.19 W) and is also well characterized using meteorological analyses from the global operational weather prediction model of Météo-France, ARPEGE. Modelled as well as assimilated fields of both ozone (O3) and carbon monoxide (CO) have been used in order to better document this event. O3 and CO from Aura/MLS and Terra/MOPITT instruments, respectively, are assimilated into the three-dimensional chemical transport model MOCAGE of Météo-France using a variational 3-DFGAT (First Guess at Appropriate Time) method. The validation of O3 and CO assimilated fields is done using selfconsistency diagnostics and by comparison with independent observations such as MOZAIC (O3 and CO), AIRS (CO) and OMI (O3). It particularly shows in the upper troposphere and lower stratosphere region that the assimilated fields are closer to MOZAIC than the free model run. The O3 bias between MOZAIC and the analyses is −11.5 ppbv with a RMS of 22.4 ppbv and a correlation coefficient of 0.93, whereas between MOZAIC and the free model run, the corresponding values are 33 ppbv, 38.5 ppbv and 0.83, respectively. In the same way, for CO, the bias, RMS and correlation coefficient between MOZAIC and the analyses are −3.16 ppbv, 13 ppbv and 0.79, respectively, whereas between MOZAIC and the free model run, the corresponding values are 33 ppbv, 38.5 ppbv and 0.83, respectively. In the same way, for CO, the bias, RMS and correlation coefficient between MOZAIC and the analyses are −3.16 ppbv, 13 ppbv and 0.79, respectively, whereas between MOZAIC and the free model they are 6.3 ppbv, 16.6 ppbv and 0.71, respectively. The paper also presents a demonstration of the capability of O3 and CO assimilated fields to better describe a stratosphere-troposphere exchange (STE) event in comparison with the free run modelled O3 and CO fields. Although the assimilation of MLS data improves the distribution of O3 above the tropopause compared to the free model run, it is not sufficient to reproduce the STE event well. Assimilated MOPITT CO allows a better qualitative description of the stratospheric intrusion event. The MOPITT CO analyses appear more promising than the MLS O3 analyses in terms of their ability to capture a deep STE event. Therefore, the results of this study open the perspectives for using MOPITT CO in the STE studies

A geostationary thermal infrared sensor to monitor the lowermost troposphere: O₃ and CO retrieval studies

This paper describes the capabilities of a nadir thermal infrared (TIR) sensor proposed for deployment onboard a geostationary platform to monitor ozone (O3) and carbon monoxide (CO) for air quality (AQ) purposes. To assess the capabilities of this sensor we perform idealized retrieval studies considering typical atmospheric profiles of O3 and CO over Europe with different instrument configuration (signal to noise ratio, SNR, and spectral sampling interval, SSI) using the KOPRA forward model and the KOPRA-fit retrieval scheme. We then select a configuration, referred to as GEO-TIR, optimized for providing information in the lowermost troposphere (LmT; 0–3 km in height). For the GEO-TIR configuration we obtain ~1.5 degrees of freedom for O3 and ~2 for CO at altitudes between 0 and 15 km. The error budget of GEO-TIR, calculated using the principal contributions to the error (namely, temperature, measurement error, smoothing error) shows that information in the LmT can be achieved by GEO-TIR. We also retrieve analogous profiles from another geostationary infrared instrument with SNR and SSI similar to the Meteosat Third Generation Infrared Sounder (MTG-IRS) which is dedicated to numerical weather prediction, referred to as GEO-TIR2. We quantify the added value of GEO-TIR over GEO-TIR2 for a realistic atmosphere, simulated using the chemistry transport model MOCAGE (MOd`ele de Chimie Atmospherique `a Grande Echelle). Results show that GEO-TIR is able to capture well the spatial and temporal variability in the LmT for both O3 and CO. These results also provide evidence of the significant added value in the LmT of GEO-TIR compared to GEO-TIR2 by showing GEO-TIR is closer to MOCAGE than GEO-TIR2 for various statistical parameters (correlation, bias, standard deviation)

A tailored multi-model ensemble for air traffic management: Demonstration and evaluation for the Eyjafjallajökull eruption in May 2010

High quality volcanic ash forecasts are crucial to minimize the economic impact of volcanic hazards on air traffic. Decision-making is usually based on numerical dispersion modeling with only one model realization. Given the inherent uncertainty of such approach, a multi-model multi-source term ensemble has been designed and evaluated for the Eyjafjallaj&ouml;kull eruption in May 2010. Its use for air traffic management is discussed. Two multi-model ensembles were built: the first is based on the output of four dispersion models and their own implementation of ash ejection. All a priori model source terms were constrained by observational evidence of the volcanic ash cloud top as a function of time. The second ensemble is based on the same four dispersion models, which were run with three additional source terms: (i) a source term obtained with background modeling constrained with satellite data (a posteriori source term), (ii) its lower bound estimate, and (iii) its upper bound estimate. The a priori ensemble gives valuable information about the probability of ash dispersion during the early phase of the eruption, when observational evidence is limited. However, its evaluation with observational data reveals lower quality compared to the second ensemble. While the second ensemble ash column load and ash horizontal location compare well to satellite observations, 3D ash concentrations are negatively biased. This might be caused by the vertical distribution of ash, which is too much diluted in all model runs, probably due to defaults in the a posteriori source term and vertical transport and/or diffusion processes in all models. Relevant products for the air traffic management are horizontal maps of ash concentration quantiles (median, 75 %, 99 %) at a fine-resolved flight level grid. These maps can be used for route optimization in the areas where ash does not pose a direct and urgent threat to aviation. Cost-optimized consideration of such hazards will result in much less impact on flight cancellations, reroutings, and traffic flow congestions.</p