His-tag-mediated dimerization of chemoreceptors leads to assembly of functional nanoarrays

Transmembrane chemotaxis receptors are found in bacteria in extended hexagonal arrays stabilized by the membrane and by cytosolic binding partners, the kinase CheA and coupling protein CheW. Models of array architecture and assembly propose receptors cluster into trimers of dimers that associate with one CheA dimer and two CheW monomers to form the minimal "core unit" necessary for signal transduction. Reconstructing in vitro chemoreceptor ternary complexes that are homogeneous and functional and exhibit native architecture remains a challenge. Here we report that His-tag-mediated receptor dimerization with divalent metals is sufficient to drive assembly of nativelike functional arrays of a receptor cytoplasmic fragment. Our results indicate receptor dimerization initiates assembly and precedes formation of ternary complexes with partial kinase activity. Restoration of maximal kinase activity coincides with a shift to larger complexes, suggesting that kinase activity depends on interactions beyond the core unit. We hypothesize that achieving maximal activity requires building core units into hexagons and/or coalescing hexagons into the extended lattice. Overall, the minimally perturbing His-tag-mediated dimerization leads to assembly of chemoreceptor arrays with native architecture and thus serves as a powerful tool for studying the assembly and mechanism of this complex and other multiprotein complexes.Microbial Biotechnolog

Preparation of non-aqueous Pickering emulsions using anisotropic block copolymer nanoparticles

In this work, we show that amphiphilic diblock copolymer worms prepared via alcoholic RAFT dispersion polymerization can be used to stabilize non-aqueous Pickering emulsions. A previously reported synthesis protocol based on polymerization-induced self-assembly (PISA) was modified to enable the preparation of poly(2-(dimethylamino)ethyl methacrylate)-poly(benzyl methacrylate) (PDMA-PBzMA) worm-like particles directly in methanol at relatively high solids. A dilute dispersion of these highly anisotropic nanoparticles was then homogenized with sunflower oil to produce sunflower oil-in-methanol emulsions. The mean droplet diameter ranged from 9 to 104 μm, depending on the nanoparticle concentration and the stirring rate used for homogenization. The sunflower oil content was increased systematically, with stable emulsions being obtained up to a volume fraction of 0.60. In all cases, the sunflower oil droplets gradually increase in size on ageing for up to 4 days. However, stable emulsions were obtained after this time period, with no further change in the mean droplet diameter for at least 2 months on standing at ambient temperature. Turbidimetry studies of the continuous phase after sedimentation of the relatively dense emulsion droplets indicated that the initial adsorption efficiency of the PDMA-PBzMA worms is very high, but this is reduced significantly as the droplet diameter gradually increases during ageing. There is a concomitant increase in fractional surface coverage over the same time period, suggesting that the increase in droplet diameter is the result of limited coalescence, rather than an Ostwald ripening mechanism

Resonant Absorption as Mode Conversion?

Resonant absorption and mode conversion are both extensively studied mechanisms for wave "absorption" in solar magnetohydrodynamics (MHD). But are they really distinct? We re-examine a well-known simple resonant absorption model in a cold MHD plasma that places the resonance inside an evanescent region. The normal mode solutions display the standard singular resonant features. However, these same normal modes may be used to construct a ray bundle which very clearly undergoes mode conversion to an Alfv\'en wave with no singularities. We therefore conclude that resonant absorption and mode conversion are in fact the same thing, at least for this model problem. The prime distinguishing characteristic that determines which of the two descriptions is most natural in a given circumstance is whether the converted wave can provide a net escape of energy from the conversion/absorption region of physical space. If it cannot, it is forced to run away in wavenumber space instead, thereby generating the arbitrarily small scales in situ that we recognize as fundamental to resonant absorption and phase mixing. On the other hand, if the converted wave takes net energy way, singularities do not develop, though phase mixing may still develop with distance as the wave recedes.Comment: 23 pages, 8 figures, 2 tables; accepted by Solar Phys (July 9 2010

Bespoke Diblock Copolymer Nanoparticles Enable Production of Relatively Stable Oil-in-Water Pickering Nanoemulsions

Sterically-stabilized diblock copolymer nanoparticles with an intensity-average diameter of 25 nm are prepared in the form of a concentrated aqueous dispersion using polymerization-induced self-assembly (PISA). Addition of n-dodecane followed by high-shear homogenization produces n-dodecane-in-water Pickering macroemulsions of 22-46 µm diameter. If the nanoparticles are present in sufficient excess, subsequent processing using a high-pressure microfluidizer leads to formation of Pickering nanoemulsions with a mean droplet diameter below 200 nm. The size of these Pickering nanoemulsions can be tuned by systematically varying the nanoparticle concentration, applied pressure, the number of passes and the oil volume fraction. High internal phase emulsions can also be achieved by increasing the n-dodecane volume fraction up to 0.80. TEM studies of (dried) n-dodecane droplets confirm the presence of intact nanoparticles and suggest a relatively high surface coverage, which is consistent with model packing calculations based on radius ratios. Such Pickering nanoemulsions proved to be remarkably stable with respect to Ostwald ripening, with no significant change in the mean DLS droplet diameter after storage for approximately four months at 20 °C

Computational Nuclear Physics and Post Hartree-Fock Methods

We present a computational approach to infinite nuclear matter employing Hartree-Fock theory, many-body perturbation theory and coupled cluster theory. These lectures are closely linked with those of chapters 9, 10 and 11 and serve as input for the correlation functions employed in Monte Carlo calculations in chapter 9, the in-medium similarity renormalization group theory of dense fermionic systems of chapter 10 and the Green's function approach in chapter 11. We provide extensive code examples and benchmark calculations, allowing thereby an eventual reader to start writing her/his own codes. We start with an object-oriented serial code and end with discussions on strategies for porting the code to present and planned high-performance computing facilities.Comment: 82 pages, to appear in Lecture Notes in Physics (Springer), "An advanced course in computational nuclear physics: Bridging the scales from quarks to neutron stars", M. Hjorth-Jensen, M. P. Lombardo, U. van Kolck, Editor

Properties of the Bose glass phase in irradiated superconductors near the matching field

Structural and transport properties of interacting localized flux lines in the Bose glass phase of irradiated superconductors are studied by means of Monte Carlo simulations near the matching field B_Phi, where the densities of vortices and columnar defects are equal. For a completely random columnar pin distribution in the xy-plane transverse to the magnetic field, our results show that the repulsive vortex interactions destroy the Mott insulator phase which was predicted to occur at B = B_Phi. On the other hand, for ratios of the penetration depth to average defect distance lambda/d <= 1, characteristic remnants of the Mott insulator singularities remain visible in experimentally accessible quantities as the magnetization, the bulk modulus, and the magnetization relaxation, when B is varied near B_Phi. For spatially more regular disorder, e.g., a nearly triangular defect distribution, we find that the Mott insulator phase can survive up to considerably large interaction range \lambda/d, and may thus be observable in experiments.Comment: RevTex, 17 pages, eps files for 12 figures include

A Lyα Transit Left Undetected: The Environment and Atmospheric Behavior of K2-25b

K2-25b is a Neptune-sized exoplanet (3.45R ⊙) that orbits its M4.5 host with a period of 3.48 days. Due to its membership in the Hyades Cluster, the system has a known age (727 ± 75 Myr). K2-25b's youth and its similarities with Gl 436b suggested that K2-25b could be undergoing strong atmospheric escape. We observed two transits of K2-25b at Lyα using HST/STIS in order to search for escaping neutral hydrogen. We were unable to detect an exospheric signature, but placed an upper limit of (R p/R ⊙)|Ly α < 0.56 at 95% confidence by fitting the light curve of the Lyα red wing, or < 1.20 in the blue wing. We reconstructed the intrinsic Lyα profile of K2-25 to determine its Lyα flux, and analyzed XMM-Newton observations to determined its X-ray flux. Based on the total X-ray and extreme ultraviolet irradiation of the planet (8763 ± 1049 erg s-1 cm-2), we estimated the maximum energy-limited mass-loss rate of K2-25b to be 10.6-6.13+15.2}×1010 g s-1 (0.56M ⊙ per 1 Gyr), five times larger than the similarly estimated mass-loss rate of Gl 436b (2.2 ± 1010 g s-1). The photoionization time is about 3 hr, significantly shorter than Gl 436b's 14 hr. A nondetection of a Lyα transit could suggest K2-25b is not significantly losing its atmosphere, or factors of the system are resulting in the mass loss being unobservable (e.g., atmosphere composition or the system's large high-energy flux). Further observations could provide more stringent constraints

PROTOCOL: Intergenerational interventions and their effect on social and mental wellbeing of both children and older people—a mapping review and evidence and gap map

This is the protocol for a Campbell systematic review and evidence and gap map. The objectives are as follows: identify, appraise and bring together the evidence on the use of intergenerational practice

Pulsar kicks from a dark-matter sterile neutrino

We show that a sterile neutrino with mass in the 1-20 keV range and a small mixing with the electron neutrino can simultaneously explain the origin of the pulsar motions and the dark matter in the universe. An asymmetric neutrino emission from a hot nascent neutron star can be the explanation of the observed pulsar velocities. In addition to the pulsar kick mechanism based on resonant neutrino transitions, we point out a new possibility: an asymmetric off-resonant emission of sterile neutrinos. The two cases correspond to different values of the masses and mixing angles. In both cases we identify the ranges of parameters consistent with the pulsar kick, as well as cosmological constraints.Comment: 5 pages, 2 figures; final version; discussion and references adde