Noise enhanced performance of ratchet cellular automata

We present the first experimental realization of a ratchet cellular automaton (RCA) which has been recently suggested as an alternative approach for performing logical operations with interacting (quasi) particles. Our study was performed with interacting colloidal particles which serve as a model system for other dissipative systems i.e. magnetic vortices on a superconductor or ions in dissipative optical arrays. We demonstrate that noise can enhance the efficiency of information transport in RCA and consequently enables their optimal operation at finite temperatures.Comment: accepted for publication at Phys. Rew. Let

Charge ordering in quarter-filled ladder systems coupled to the lattice

We investigate charge ordering in the presence of electron-phonon coupling for quarter-filled ladder systems by using Exact Diagonalization. As an example we consider NaV2O5 using model parameters obtained from first-principles band-structure calculations. The relevant Holstein coupling to the lattice considerably reduces the critical value of the nearest-neighbor Coulomb repulsion at which formation of the zig-zag charge-ordered state occurs, which is then accompanied by a static lattice distortion. Energy and length of a kink-like excitation on the background of the distorted lattice are calculated. Spin and charge spectra on ladders with and without static distortion are obtained, and the charge gap and the effective spin-spin exchange parameter J are extracted. J agrees well with experimental results. Analysis of the dynamical Holstein model, restricted to a small number of phonons, shows that low frequency lattice vibrations increase the charge order, accompanied by dynamically produced zig-zag lattice distortions.Comment: 11 pages, 17 figures, revised version as to appear in Phys. Rev.

A Stability Diagram for Dense Suspensions of Model Colloidal Al2O3-Particles in Shear Flow

In Al2O3 suspensions, depending on the experimental conditions very different microstructures can be found, comprising fluid like suspensions, a repulsive structure, and a clustered microstructure. For technical processing in ceramics, the knowledge of the microstructure is of importance, since it essentially determines the stability of a workpiece to be produced. To enlighten this topic, we investigate these suspensions under shear by means of simulations. We observe cluster formation on two different length scales: the distance of nearest neighbors and on the length scale of the system size. We find that the clustering behavior does not depend on the length scale of observation. If inter-particle interactions are not attractive the particles form layers in the shear flow. The results are summarized in a stability diagram.Comment: 15 pages, 10 figures, revised versio

A numerical study of a binary Yukawa model in regimes characteristic of globular proteins in solutions

The main goal of this paper is to assess the limits of validity, in the regime of low concentration and strong Coulomb coupling (high molecular charges), for a simple perturbative approximation to the radial distribution functions (RDF), based upon a low-density expansion of the potential of mean force and proposed to describe protein-protein interactions in a recent Small-Angle-Scattering (SAS) experimental study. A highly simplified Yukawa (screened Coulomb) model of monomers and dimers of a charged globular protein ($\beta$-lactoglobulin) in solution is considered. We test the accuracy of the RDF approximation, as a necessary complementary part of the previous experimental investigation, by comparison with the fluid structure predicted by approximate integral equations and exact Monte Carlo (MC) simulations. In the MC calculations, an Ewald construction for Yukawa potentials has been used to take into account the long-range part of the interactions in the weakly screened cases. Our results confirm that the perturbative first-order approximation is valid for this system even at strong Coulomb coupling, provided that the screening is not too weak (i.e., for Debye length smaller than monomer radius). A comparison of the MC results with integral equation calculations shows that both the hypernetted-chain (HNC) and the Percus-Yevick (PY) closures have a satisfactory behavior under these regimes, with the HNC being superior throughout. The relevance of our findings for interpreting SAS results is also discussed.Comment: Physical Review E, in press (2005

Spin models for orientational ordering of colloidal molecular crystals

Two-dimensional colloidal suspensions exposed to periodic external fields exhibit a variety of molecular crystalline phases. There two or more colloids assemble at lattice sites of potential minima to build new structural entities, referred to as molecules. Using the strength of the potential and the filling fraction as control parameter, phase transition to unconventional orientationally ordered states can be induced. We introduce an approach that focuses at the discrete set of orientational states relevant for the phase ordering. The orientationally ordered states are mapped to classical spin systems. We construct effective hamiltonians for dimeric and trimeric molecules on triangular lattices suitable for a statistical mechanics discussion. A mean-field analysis produces a rich phase behavior which is substantiated by Monte Carlo simulations.Comment: 19 pages, 21 figures; misplacement of Fig.3 fixe

Shear Viscosity of Clay-like Colloids in Computer Simulations and Experiments

Dense suspensions of small strongly interacting particles are complex systems, which are rarely understood on the microscopic level. We investigate properties of dense suspensions and sediments of small spherical Al_2O_3 particles in a shear cell by means of a combined Molecular Dynamics (MD) and Stochastic Rotation Dynamics (SRD) simulation. We study structuring effects and the dependence of the suspension's viscosity on the shear rate and shear thinning for systems of varying salt concentration and pH value. To show the agreement of our results to experimental data, the relation between bulk pH value and surface charge of spherical colloidal particles is modeled by Debye-Hueckel theory in conjunction with a 2pK charge regulation model.Comment: 15 pages, 8 figure

Charge-Reversal Instability in Mixed Bilayer Vesicles

Bilayer vesicles form readily from mixtures of charged and neutral surfactants. When such a mixed vesicle binds an oppositely-charged object, its membrane partially demixes: the adhesion zone recruits more charged surfactants from the rest of the membrane. Given an unlimited supply of adhering objects one might expect the vesicle to remain attractive until it was completely covered. Contrary to this expectation, we show that a vesicle can instead exhibit {\it adhesion saturation,} partitioning spontaneously into an attractive zone with definite area fraction, and a repulsive zone. The latter zone rejects additional incoming objects because counterions on the interior of the vesicle migrate there, effectively reversing the membrane's charge. The effect is strongest at high surface charge densities, low ionic strength, and with thin, impermeable membranes. Adhesion saturation in such a situation has recently been observed experimentally [H. Aranda-Espinoza {\it et al.}, {\sl Science} {\bf285} 394--397 (1999)]

Direct measurement of three-body interactions

Three-body interactions have been measured among three charged colloidal particles in deionized solvent. Two of the particles have been confined to an optical line-trap while the third one was approached by means of a focused laser beam. The experimentally determined three-body interactions are attractive and roughly of the same magnitude and range as the pair-interactions. In addition, numerical calculations have been performed, which show good agreement with the experimental results

Attraction between DNA molecules mediated by multivalent ions

The effective force between two parallel DNA molecules is calculated as a function of their mutual separation for different valencies of counter- and salt ions and different salt concentrations. Computer simulations of the primitive model are used and the shape of the DNA molecules is accurately modelled using different geometrical shapes. We find that multivalent ions induce a significant attraction between the DNA molecules whose strength can be tuned by the averaged valency of the ions. The physical origin of the attraction is traced back either to electrostatics or to entropic contributions. For multivalent counter- and monovalent salt ions, we find a salt-induced stabilization effect: the force is first attractive but gets repulsive for increasing salt concentration. Furthermore, we show that the multivalent-ion-induced attraction does not necessarily correlate with DNA overcharging.Comment: 51 pages and 13 figure

Effective interaction between helical bio-molecules

The effective interaction between two parallel strands of helical bio-molecules, such as deoxyribose nucleic acids (DNA), is calculated using computer simulations of the "primitive" model of electrolytes. In particular we study a simple model for B-DNA incorporating explicitly its charge pattern as a double-helix structure. The effective force and the effective torque exerted onto the molecules depend on the central distance and on the relative orientation. The contributions of nonlinear screening by monovalent counterions to these forces and torques are analyzed and calculated for different salt concentrations. As a result, we find that the sign of the force depends sensitively on the relative orientation. For intermolecular distances smaller than $6\AA$ it can be both attractive and repulsive. Furthermore we report a nonmonotonic behaviour of the effective force for increasing salt concentration. Both features cannot be described within linear screening theories. For large distances, on the other hand, the results agree with linear screening theories provided the charge of the bio-molecules is suitably renormalized.Comment: 18 pages, 18 figures included in text, 100 bibliog