Discovery of Northern Fur Seals (Callorhinus ursinus) Breeding on Bogoslof Island Southeastern Bering Sea

A small group of northern fur seals (Callorhinus ursinus) including one male with two females, each with a small pup, and two lone males were discovered on Bogoslof Island, Alaska in the Bering Sea on 20 July 1980. This is the first evidence of breeding on Bogoslof, or on any island in the eastern Bering Sea other than the Pribilof Islands. We suggest that these fur seals require breeding islands adjacent to the continental shelf break where they are supported by the pelagic food web characteristic of the oceanic and outer shelf domains.Key words: fur seal, Callorhinus ursinus, Steller sea lion, Eumetopias jubatus, Aleutian Islands, Bering SeaMots clés: otarie à fourrure, Callorhinus ursinus, otarie, Eumetopias jubatus, îles Aléoutiennes, mer de Bérin

Genome-wide analysis of genetic and epigenetic control of programmed DNA deletion

During the development of the somatic genome from the Paramecium germline genome the bulk of the copies of ∼45 000 unique, internal eliminated sequences (IESs) are deleted. IES targeting is facilitated by two small RNA (sRNA) classes: scnRNAs, which relay epigenetic information from the parental nucleus to the developing nucleus, and iesRNAs, which are produced and used in the developing nucleus. Why only certain IESs require sRNAs for their removal has been enigmatic. By analyzing the silencing effects of three genes: PGM (responsible for DNA excision), DCL2/3 (scnRNA production) and DCL5 (iesRNA production), we identify key properties required for IES elimination. Based on these results, we propose that, depending on the exact combination of their lengths and end bases, some IESs are less efficiently recognized or excised and have a greater requirement for targeting by scnRNAs and iesRNAs. We suggest that the variation in IES retention following silencing of DCL2/3 is not primarily due to scnRNA density, which is comparatively uniform relative to IES retention, but rather the genetic properties of IESs. Taken together, our analyses demonstrate that in Paramecium the underlying genetic properties of developmentally deleted DNA sequences are essential in determining the sensitivity of these sequences to epigenetic contro

Neural Filters for Jet Analysis

We study the efficiency of a neural-net filter and deconvolution method for estimating jet energies and spectra in high-background reactions such as nuclear collisions at the relativistic heavy-ion collider and the large hadron collider. The optimal network is shown to be surprisingly close but not identical to a linear high-pass filter. A suitably constrained deconvolution method is shown to uncover accurately the underlying jet distribution in spite of the broad network response. Finally, we show that possible changes of the jet spectrum in nuclear collisions can be analyzed quantitatively, in terms of an effective energy loss with the proposed method. {} {Dong D W and Gyulassy M 1993}{Neural filters for jet analysis} {(LBL-31560) Physical Review E Vol~47(4) pp~2913-2922}Comment: 21 pages of Postscript, (LBL-31560

SMAD transcription factors are altered in cell models of HD and regulate HTT expression

Transcriptional dysregulation is observable in multiple animal and cell models of Huntington's disease, as well as in human blood and post-mortem caudate. This contributes to HD pathogenesis, although the exact mechanism by which this occurs is unknown. We therefore utilised a dynamic model in order to determine the differential effect of growth factor stimulation on gene expression, to highlight potential alterations in kinase signalling pathways that may be in part responsible for the transcriptional dysregulation observed in HD, and which may reveal new therapeutic targets. We demonstrate that cells expressing mutant huntingtin have a dysregulated transcriptional response to epidermal growth factor stimulation, and identify the transforming growth factor-beta pathway as a novel signalling pathway of interest that may regulate the expression of the Huntingtin (HTT) gene itself. The dysregulation of HTT expression may contribute to the altered transcriptional phenotype observed in HD

Basal type I interferon signaling has only modest effects on neonatal and juvenile hematopoiesis

Type I interferon (IFN-1) regulates gene expression and hematopoiesis both during development and in response to inflammatory stress. We previously showed that during development in mice, hematopoietic stem cells (HSCs) and multipotent progenitors (MPPs) induce IFN-1 target genes shortly before birth. This coincides with the onset of a transition to adult hematopoiesis, and it drives the expression of genes associated with antigen presentation. However, it is not clear whether perinatal IFN-1 modulates hematopoietic output, as has been observed in contexts of inflammation. We have characterized hematopoiesis at several different stages of blood formation, from HSCs to mature blood cells, and found that loss of the IFN-1 receptor (IFNAR1) leads to depletion of several phenotypic HSC and MPP subpopulations in neonatal and juvenile mice. Committed lymphoid and myeloid progenitor populations expand simultaneously. These changes had a surprisingly little effect on the production of more differentiated blood cells. Cellular indexing of transcriptomes and epitopes by sequencing resolved the discrepancy between the extensive changes in progenitor numbers and modest changes in hematopoiesis, revealing stability in most MPP populations in Ifnar1-deficient neonates when the populations were identified based on gene expression rather than surface marker phenotype. Thus, basal IFN-1 signaling has only modest effects on hematopoiesis. Discordance between transcriptionally and phenotypically defined MPP populations may affect interpretations of how IFN-1 shapes hematopoiesis in other contexts, such as aging or inflammation

Consolidated science and user requirements for a next generation gravity field mission

In an internationally coordinated initiative among the main user communities of gravity field products the science and user requirements for a future gravity field mission constellation (beyond GRACE-FO) have been reviewed and defined. This activity was realized as a joint initiative of the IAG (International Association of Geodesy) Sub-Commissions 2.3 and 2.6, the GGOS (Global Geodetic Observing System) Working Group on Satellite Missions, and the IUGG (International Union of Geodesy and Geophysics). After about one year of preparation, in a user workshop that was held in September 2014 consensus among the user communities of hydrology, ocean, cryosphere, solid Earth and atmosphere on consolidated science requirements could be achieved. The consolidation of the user requirements became necessary, because several future gravity field studies have resulted in quite different performance numbers as a target for a future gravity mission (2025+). Based on limited number of mission scenarios which took also technical feasibility into account, a consolidated view on the science requirements among the international user communities was derived, research fields that could not be tackled by current gravity missions have been identified, and the added value (qualitatively and quantitatively) of these scenarios with respect to science return has been evaluated. The resulting document shall form the basis for further programmatic and technological developments. In this contribution, the main results of this initiative will be presented. An overview of the specific requirements of the individual user groups, the consensus on consolidated requirements as well as the new research fields that have been identified during this process will be discussed

Receding horizon control applied to optimal mine planning

In this paper we show that the problem of optimal mine planning can be cast in the framework of receding horizon control. Traditional formulations of this problem have cast it in the framework of mixed integer linear programming. In this paper, we present an alternative formulation of the mine planning problem using the \language" of control engineering. We show that this alternative formulation gives rise to new insights which have the potential to lead to improved computational procedures. The advantages are illustrated by an example incorporating many practical features of an actual mine planning problem

Road salt emissions: A comparison of measurements and modelling using the NORTRIP road dust emission model

AbstractDe-icing of road surfaces is necessary in many countries during winter to improve vehicle traction. Large amounts of salt, most often sodium chloride, are applied every year. Most of this salt is removed through drainage or traffic spray processes but a certain amount may be suspended, after drying of the road surface, into the air and will contribute to the concentration of particulate matter. Though some measurements of salt concentrations are available near roads, the link between road maintenance salting activities and observed concentrations of salt in ambient air is yet to be quantified. In this study the NORTRIP road dust emission model, which estimates the emissions of both dust and salt from the road surface, is applied at five sites in four Nordic countries for ten separate winter periods where daily mean ambient air measurements of salt concentrations are available. The model is capable of reproducing many of the salt emission episodes, both in time and intensity, but also fails on other occasions. The observed mean concentration of salt in PM10, over all ten datasets, is 4.2 μg/m3 and the modelled mean is 2.8 μg/m3, giving a fractional bias of −0.38. The RMSE of the mean concentrations, over all 10 datasets, is 2.9 μg/m3 with an average R2 of 0.28. The mean concentration of salt is similar to the mean exhaust contribution during the winter periods of 2.6 μg/m3. The contribution of salt to the kerbside winter mean PM10 concentration is estimated to increase by 4.1 ± 3.4 μg/m3 for every kg/m2 of salt applied on the road surface during the winter season. Additional sensitivity studies showed that the accurate logging of salt applications is a prerequisite for predicting salt emissions, as well as good quality data on precipitation. It also highlights the need for more simultaneous measurements of salt loading together with ambient air concentrations to help improve model parameterisations of salt and moisture removal processes