1,174 research outputs found
On the usefulness of finding charts Or the runaway carbon stars of the Blanco & McCarthy field 37
We have been recently faced with the problem of cross--identifying stars
recorded in historical catalogues with those extracted from recent fully
digitized surveys (such as DENIS and 2MASS). Positions mentioned in the old
catalogues are frequently of poor precision, but are generally accompanied by
finding charts where the interesting objects are flagged. Those finding charts
are sometimes our only link with the accumulated knowledge of past literature.
While checking the identification of some of these objects in several
catalogues, we had the surprise to discover a number of discrepancies in recent
works.The main reason for these discrepancies was generally the blind
application of the smallest difference in position as the criterion to identify
sources from one historical catalogue to those in more recent surveys. In this
paper we give examples of such misidentifications, and show how we were able to
find and correct them.We present modern procedures to discover and solve
cross--identification problems, such as loading digitized images of the sky
through the Aladin service at CDS, and overlaying entries from historical
catalogues and modern surveys. We conclude that the use of good finding charts
still remains the ultimate (though time--consuming) tool to ascertain
cross--identifications in difficult cases.Comment: 4 pages, 1 figure, accepted by A&
Protein multi-scale organization through graph partitioning and robustness analysis: Application to the myosin-myosin light chain interaction
Despite the recognized importance of the multi-scale spatio-temporal
organization of proteins, most computational tools can only access a limited
spectrum of time and spatial scales, thereby ignoring the effects on protein
behavior of the intricate coupling between the different scales. Starting from
a physico-chemical atomistic network of interactions that encodes the structure
of the protein, we introduce a methodology based on multi-scale graph
partitioning that can uncover partitions and levels of organization of proteins
that span the whole range of scales, revealing biological features occurring at
different levels of organization and tracking their effect across scales.
Additionally, we introduce a measure of robustness to quantify the relevance of
the partitions through the generation of biochemically-motivated surrogate
random graph models. We apply the method to four distinct conformations of
myosin tail interacting protein, a protein from the molecular motor of the
malaria parasite, and study properties that have been experimentally addressed
such as the closing mechanism, the presence of conserved clusters, and the
identification through computational mutational analysis of key residues for
binding.Comment: 13 pages, 7 Postscript figure
Identification and geographic distribution of genetic groups of Erysiphe necator in Chilean vineyards
The grapevine powdery mildew, caused by the biotrophic fungus Erysiphe necator, is one of the most important diseases of this crop in Chile. We converted existing single nucleotide polymorphisms in ÎČ-tubulin, rDNA intergenic spacer region 1 and eburicol 14-α-demethylase into three cleaved amplified polymorphic sequences (CAPS). These CAPS markers were used for the genetic characterization of Erysiphe necator isolates collected on clusters of Vitis vinifera cv. 'Cabernet Sauvignon' in 23 vineyards across Chile. Among the 105 Chilean isolates analyzed, 103 revealed to belong to genetic group B and 2 to genetic group A. These results correspond to the first report of the presence of genetic groups A and B of E. necator in Chile
A late medieval warm period in the Southern Ocean as a delayed response to external forcing?
International audienceOn the basis of long simulations performed with a threeâdimensional climate model, we propose an interhemispheric climate lag mechanism, involving the longâterm memory of deepwater masses. Warm anomalies, formed in the North Atlantic when warm conditions prevail at surface, are transported by the deep ocean circulation towards the Southern Ocean. There, the heat is released because of large scale upwelling, maintaining warm conditions and inducing a lagged response of about 150 years compared to the Northern Hemisphere. Model results and observations covering the first half of the second millenium suggest a delay between the temperature evolution in the Northern Hemisphere and in the Southern Ocean. The mechanism described here provides a reasonable hypothesis to explain such an interhemipsheric lag
An artificial neural networkâbased model to predict chronic kidney disease in aged cats
Background
Chronic kidney disease (CKD) frequently causes death in older cats; its early detection is challenging.
Objectives
To build a sensitive and specific model for early prediction of CKD in cats using artificial neural network (ANN) techniques applied to routine health screening data.
Animals
Data from 218 healthy cats â„7âyears of age screened at the Royal Veterinary College (RVC) were used for model building. Performance was tested using data from 3546 cats in the Banfield Pet Hospital records and an additional 60 RCV catsâall initially without a CKD diagnosis.
Methods
Artificial neural network (ANN) modeling used a multilayer feedâforward neural network incorporating a backâpropagation algorithm. Clinical variables from single cat visits were selected using factorial discriminant analysis. Independent submodels were built for different prediction time frames. Two decision threshold strategies were investigated.
Results
Input variables retained were plasma creatinine and blood urea concentrations, and urine specific gravity. For prediction of CKD within 12âmonths, the model had accuracy, sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV) of 88%, 87%, 70%, 53%, and 92%, respectively. An alternative decision threshold increased specificity and PPV to 98% and 87%, but decreased sensitivity and NPV to 42% and 79%, respectively.
Conclusions and Clinical Importance
A model was generated that identified cats in the general population â„7âyears of age that are at risk of developing CKD within 12âmonths. These individuals can be recommended for further investigation and monitoring more frequently than annually. Predictions were based on single visits using common clinical variables
Diffusive limits on the Penrose tiling
In this paper random walks on the Penrose lattice are investigated. Heat
kernel estimates and the invariance principle are shown
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