Apparent suppression of turbulent magnetic dynamo action by a dc magnetic field

Numerical studies of the effect of a dc magnetic field on dynamo action (development of magnetic fields with large spatial scales), due to helically-driven magnetohydrodynamic turbulence, are reported. The apparent effect of the dc magnetic field is to suppress the dynamo action, above a relatively low threshold. However, the possibility that the suppression results from an improper combination of rectangular triply spatially-periodic boundary conditions and a uniform dc magnetic field is addressed: heretofore a common and convenient computational convention in turbulence investigations. Physical reasons for the observed suppression are suggested. Other geometries and boundary conditions are offered for which the dynamo action is expected not to be suppressed by the presence of a dc magnetic field component.Comment: To appear in Physics of Plasma

A numerical study of the alpha model for two-dimensional magnetohydrodynamic turbulent flows

We explore some consequences of the ``alpha model,'' also called the ``Lagrangian-averaged'' model, for two-dimensional incompressible magnetohydrodynamic (MHD) turbulence. This model is an extension of the smoothing procedure in fluid dynamics which filters velocity fields locally while leaving their associated vorticities unsmoothed, and has proved useful for high Reynolds number turbulence computations. We consider several known effects (selective decay, dynamic alignment, inverse cascades, and the probability distribution functions of fluctuating turbulent quantities) in magnetofluid turbulence and compare the results of numerical solutions of the primitive MHD equations with their alpha-model counterparts' performance for the same flows, in regimes where available resolution is adequate to explore both. The hope is to justify the use of the alpha model in regimes that lie outside currently available resolution, as will be the case in particular in three-dimensional geometry or for magnetic Prandtl numbers differing significantly from unity. We focus our investigation, using direct numerical simulations with a standard and fully parallelized pseudo-spectral method and periodic boundary conditions in two space dimensions, on the role that such a modeling of the small scales using the Lagrangian-averaged framework plays in the large-scale dynamics of MHD turbulence. Several flows are examined, and for all of them one can conclude that the statistical properties of the large-scale spectra are recovered, whereas small-scale detailed phase information (such as e.g. the location of structures) is lost.Comment: 22 pages, 20 figure

Low magnetic Prandtl number dynamos with helical forcing

We present direct numerical simulations of dynamo action in a forced Roberts flow. The behavior of the dynamo is followed as the mechanical Reynolds number is increased, starting from the laminar case until a turbulent regime is reached. The critical magnetic Reynolds for dynamo action is found, and in the turbulent flow it is observed to be nearly independent on the magnetic Prandtl number in the range from 0.3 to 0.1. Also the dependence of this threshold with the amount of mechanical helicity in the flow is studied. For the different regimes found, the configuration of the magnetic and velocity fields in the saturated steady state are discussed.Comment: 9 pages, 14 figure

The Social Costs of an MTBE Ban in California

Resource /Energy Economics and Policy,

Velocity field distributions due to ideal line vortices

We evaluate numerically the velocity field distributions produced by a bounded, two-dimensional fluid model consisting of a collection of parallel ideal line vortices. We sample at many spatial points inside a rigid circular boundary. We focus on ``nearest neighbor'' contributions that result from vortices that fall (randomly) very close to the spatial points where the velocity is being sampled. We confirm that these events lead to a non-Gaussian high-velocity ``tail'' on an otherwise Gaussian distribution function for the Eulerian velocity field. We also investigate the behavior of distributions that do not have equilibrium mean-field probability distributions that are uniform inside the circle, but instead correspond to both higher and lower mean-field energies than those associated with the uniform vorticity distribution. We find substantial differences between these and the uniform case.Comment: 21 pages, 9 figures. To be published in Physical Review E (http://pre.aps.org/) in May 200

Numerical Solutions of the Three-Dimensional Magnetohydrodynamic Α Model

We present direct numerical simulations and α-model simulations of four familiar three-dimensional magnetohydrodynamic (MHD) turbulence effects: selective decay, dynamic alignment, inverse cascade of magnetic helicity, and the helical dynamo effect. The MHD α model is shown to capture the long-wavelength spectra in all these problems, allowing for a significant reduction of computer time and memory at the same kinetic and magnetic Reynolds numbers. In the helical dynamo, not only does the α model correctly reproduce the growth rate of magnetic energy during the kinematic regime, it also captures the nonlinear saturation level and the late generation of a large scale magnetic field by the helical turbulence

Numerical solutions of the three-dimensional magnetohydrodynamic alpha-model

We present direct numerical simulations and alpha-model simulations of four familiar three-dimensional magnetohydrodynamic (MHD) turbulence effects: selective decay, dynamic alignment, inverse cascade of magnetic helicity, and the helical dynamo effect. The MHD alpha-model is shown to capture the long-wavelength spectra in all these problems, allowing for a significant reduction of computer time and memory at the same kinetic and magnetic Reynolds numbers. In the helical dynamo, not only does the alpha-model correctly reproduce the growth rate of magnetic energy during the kinematic regime, but it also captures the nonlinear saturation level and the late generation of a large scale magnetic field by the helical turbulence.Comment: 12 pages, 19 figure

Synthesis of Cyclic Py-Im Polyamide Libraries

Cyclic Py-Im polyamides containing two GABA turn units exhibit enhanced DNA binding affinity, but extensive studies of their biological properties have been hindered due to synthetic inaccessibility. A facile modular approach toward cyclic polyamides has been developed via microwave-assisted solid-phase synthesis of hairpin amino acid oligomer intermediates followed by macrocyclization. A focused library of cyclic polyamides 1–7 targeted to the androgen response element (ARE) and the estrogen response element (ERE) were synthesized in 12–17% overall yield. The Fmoc protection strategy also allows for selective modifications on the GABA turn units that have been shown to improve cellular uptake properties. The DNA binding affinities of a library of cyclic polyamides were measured by DNA thermal denaturation assays and compared to the corresponding hairpin polyamides. Fluorescein-labeled cyclic polyamides have been synthesized and imaged via confocal microscopy in A549 and T47D cell lines. The IC_50 values of compounds 1–7 and 9–11 were determined, revealing remarkably varying levels of cytotoxicity

Magnetohydrodynamic activity inside a sphere

We present a computational method to solve the magnetohydrodynamic equations in spherical geometry. The technique is fully nonlinear and wholly spectral, and uses an expansion basis that is adapted to the geometry: Chandrasekhar-Kendall vector eigenfunctions of the curl. The resulting lower spatial resolution is somewhat offset by being able to build all the boundary conditions into each of the orthogonal expansion functions and by the disappearance of any difficulties caused by singularities at the center of the sphere. The results reported here are for mechanically and magnetically isolated spheres, although different boundary conditions could be studied by adapting the same method. The intent is to be able to study the nonlinear dynamical evolution of those aspects that are peculiar to the spherical geometry at only moderate Reynolds numbers. The code is parallelized, and will preserve to high accuracy the ideal magnetohydrodynamic (MHD) invariants of the system (global energy, magnetic helicity, cross helicity). Examples of results for selective decay and mechanically-driven dynamo simulations are discussed. In the dynamo cases, spontaneous flips of the dipole orientation are observed.Comment: 15 pages, 19 figures. Improved figures, in press in Physics of Fluid

Dynamo Regimes with a Nonhelical Forcing

A three-dimensional numerical computation of magnetohydrodynamic dynamo behavior is described. The dynamo is mechanically forced with a driving term of the Taylor-Green type. The magnetic field development is followed from negligibly small levels to saturated values that occur at magnetic energies comparable to the kinetic energies. Although there is locally a nonzero helicity density, there is no overall integrated helicity in the system. Persistent oscillations are observed in the saturated state for not-too-large mechanical Reynolds numbers, oscillations in which the kinetic and magnetic energies vary out of phase but with no reversal of the magnetic field. The flow pattern exhibits considerable geometrical structure in this regime. As the Reynolds number is increased, the oscillations disappear and the energies become more nearly stationary, but retain some unsystematically fluctuating turbulent time dependence. The regular geometrical structure of the fields gives way to a more spatially disordered distribution. The injection and dissipation scales are identified, and the different components of energy transfer in Fourier space are analyzed, particularly in the context of clarifying the role played by different flow scales in the amplification of the magnetic field. We observe that small and large scales interact and contribute to the dynamo process