A Characterization of Different Spark Regimes for Ignition Delay Comparison with Conventional Spark Plugs

poster abstractThe introduction of plasma into combustion and ignition processes has continuously proved to be advantageous when compared to the conventional spark ignition in a wide range of categories. From the capability to ignite leaner mixtures and improve fuel economy to an effective reduction of hazardous emissions and ignition delay, the benefits of integrating non-equilibrium plasma can be utilized for numerous applications including hot jet ignition. Detailed design specifications for the electrode configuration, circuit schematic, and combustion rig are developed and presented. Using a CCD camera and high performance oscilloscope, this paper aims to identify, characterize, and compare the different effects of frequency and pulse width of a driver circuit on the plasma sparks quantitatively in terms of the current, voltage, and energy attributes. Four different plasma regimes are investigated with frequencies ranging from 5.44 Hz to 95.46 kHz and pulse energies ranging from 168 μJ to 14.42 J. The maximum voltage and current characteristics of the plasmas indicate a glow discharge referencing previous experiments. Future work is laid out for a comparison of the ignition progression between a non-thermal plasma system and a traditional spark with using Schlieren imaging

Novel Bacterial Diversity and Fragmented eDNA Identified in Hyperbiofilm-Forming Pseudomonas aeruginosa Rugose Small Colony Variant

Pseudomonas aeruginosa biofilms represent a major threat to health care. Rugose small colony variants (RSCV) of P. aeruginosa, isolated from chronic infections, display hyperbiofilm phenotype. RSCV biofilms are highly resistant to antibiotics and host defenses. This work shows that RSCV biofilm aggregates consist of two distinct bacterial subpopulations that are uniquely organized displaying contrasting physiological characteristics. Compared with that of PAO1, the extracellular polymeric substance of RSCV PAO1ΔwspF biofilms presented unique ultrastructural characteristics. Unlike PAO1, PAO1ΔwspF released fragmented extracellular DNA (eDNA) from live cells. Fragmented eDNA, thus released, was responsible for resistance of PAO1ΔwspF biofilm to disruption by DNaseI. When added to PAO1, such fragmented eDNA enhanced biofilm formation. Disruption of PAO1ΔwspF biofilm was achieved by aurine tricarboxylic acid, an inhibitor of DNA-protein interaction. This work provides critical novel insights into the contrasting structural and functional characteristics of a hyperbiofilm-forming clinical bacterial variant relative to its own wild-type strain

Asymmetry and Inequity in the Inheritance of a Bacterial Adhesive

Pseudomonas aeruginosa is an opportunistic human pathogen that forms biofilm infections in a wide variety of contexts. Biofilms initiate when bacteria attach to a surface, which triggers changes in gene expression leading to the biofilm phenotype.Wehave previously shown, for the P. aeruginosa lab strain PAO1, that the self-produced polymer Psl is the most dominant adhesive for attachment to the surface but that another self-produced polymer, Pel, controls the geometry of attachment of these rod-shaped bacteria—strains that make Psl but not Pel are permanently attached to the surface but adhere at only one end (tilting up off the surface), whereas wild-type bacteria that make both Psl and Pel are permanently attached and lie down flat with very little or no tilting (Cooley et al 2013 Soft Matter 9 3871–6). Here we show that the change in attachment geometry reflects a change in the distribution of Psl on the bacterial cell surface. Bacteria that make Psl and Pel have Psl evenly coating the surface, whereas bacteria that make only Psl have Psl concentrated at only one end.Weshow that Psl can act as an inheritable, epigenetic factor. Rod-shaped P. aeruginosa grows lengthwise and divides across the middle.Wefind that asymmetry in the distribution of Psl on a parent cell is reflected in asymmetry between siblings in their attachment to the surface. Thus, Pel not only promotes P. aeruginosa lying downWe thank Professor Matthew Parsek (University of Washington, Seattle) for his generous gift of bacterial PAO1 strains.Wealso thank Professor Marvin Whiteley (University of Texas at Austin) forWTandΔpsl polysaccharide preparations. SIM imaging (for figure 1) was performed in the Microscopy Core Facility within the Institute for Cellular and Molecular Biology atUTAustin, with the assistance of Julie Hayes. This work was funded by startup funds fromUTAustin and a gift from ExxonMobil to VDG, and by a grant from the Human Frontiers Science Program (HFSP RGY0081/2012-GORDON).Center for Nonlinear Dynamic

Catalog of fundamental mode RR Lyrae stars in the Galactic bulge from the Optical Gravitational Lensing Experiment

We present a catalog of 1888 fundamental-mode RR Lyrae stars detected in the Galactic bulge fields of the second phase of the Optical Gravitational Lensing Experiment (OGLE). The catalog includes basic parameters of the light curves, identifications of Blazhko frequencies, V-I colors at minimum light (for most stars), and other information for each star. We detect a high rate of incidence of the Blazhko phenomenon (at least 27.6%), including unprecedentedly many frequency triplets, which we attribute to our sensitive search method. We find that the minimum light V-I color (useful as a reddening indicator) grows slowly redder with increasing period and exhibits a star-to-star scatter of approximately 0.07 mag. We use this color to evaluate the zero-point accuracy of the reddening map of the Galactic bulge derived from OGLE data, and find that in addition to low-level random errors or resolution effects (responsible for much of the scatter), the map may systematically over-represent E(V-I) by approximately 0.05 mag in most fields. We present reasonably robust evidence that the RR Lyrae-to-red clump color separation is larger by 0.05--0.08 mag in the bulge than locally, which argues for caution in the use of these stars for reddening determinations. We consider the RR Lyrae constraint on the Galactocentric distance, but uncertainty about the absolute magnitude calibration leaves significant flexibility in the result. In contrast to previous results, we robustly detect the signature of the Galactic bar in the RR Lyrae population within the inner plus/minus 3 degrees of longitude, and we highlight the apparent differences between the structures traced by the red clump giants and the more metal-poor RR Lyrae stars. (abridged)Comment: Submitted to ApJ, 34 pages aastex including 8 figures, full tables to appear electronically (temporarily available at http://www.astro.princeton.edu/~collinge/RR/

ChIP-Seq and RNA-Seq Reveal an AmrZ-Mediated Mechanism for Cyclic di-GMP Synthesis and Biofilm Development by Pseudomonas aeruginosa

The transcription factor AmrZ regulates genes important for P. aeruginosa virulence, including type IV pili, extracellular polysaccharides, and the flagellum; however, the global effect of AmrZ on gene expression remains unknown, and therefore, AmrZ may directly regulate many additional genes that are crucial for infection. Compared to the wild type strain, a ΔamrZ mutant exhibits a rugose colony phenotype, which is commonly observed in variants that accumulate the intracellular second messenger cyclic diguanylate (c-di-GMP). Cyclic di-GMP is produced by diguanylate cyclases (DGC) and degraded by phosphodiesterases (PDE). We hypothesized that AmrZ limits the intracellular accumulation of c-di-GMP through transcriptional repression of gene(s) encoding a DGC. In support of this, we observed elevated c-di-GMP in the ΔamrZ mutant compared to the wild type strain. Consistent with other strains that accumulate c-di-GMP, when grown as a biofilm, the ΔamrZ mutant formed larger microcolonies than the wild-type strain. This enhanced biofilm formation was abrogated by expression of a PDE. To identify potential target DGCs, a ChIP-Seq was performed and identified regions of the genome that are bound by AmrZ. RNA-Seq experiments revealed the entire AmrZ regulon, and characterized AmrZ as an activator or repressor at each binding site. We identified an AmrZ-repressed DGC-encoding gene (PA4843) from this cohort, which we named AmrZ dependent cyclase A (adcA). PAO1 overexpressing adcA accumulates 29-fold more c-di-GMP than the wild type strain, confirming the cyclase activity of AdcA. In biofilm reactors, a ΔamrZ ΔadcA double mutant formed smaller microcolonies than the single ΔamrZ mutant, indicating adcA is responsible for the hyper biofilm phenotype of the ΔamrZ mutant. This study combined the techniques of ChIP-Seq and RNA-Seq to define the comprehensive regulon of a bifunctional transcriptional regulator. Moreover, we identified a c-di-GMP mediated mechanism for AmrZ regulation of biofilm formation and chronicity

Evidence for Supernova-Synthesised Dust from the Rising Afterglow of GRB 071025 at z~5

We present observations and analysis of the broadband afterglow of Swift GRB 071025. Using optical and infrared (RIYJHK) photometry, we derive a photometric redshift of 4.4 < z < 5.2; at this redshift our simultaneous multicolour observations begin at ~30 s after the GRB trigger in the host frame and during the initial rising phase of the afterglow. We associate the light curve peak at 580 s in the observer frame with the formation of the forward shock, giving an estimate of the initial Lorentz factor Gamma_0 ~ 200. The red spectral energy distribution (even in regions not affected by the Lyman-alpha break) provides secure evidence of a large dust column. However, the inferred extinction curve shows a prominent flat component between 2000-3000 Angstroms in the rest-frame, inconsistent with any locally observed template but well-fit by models of dust formed by supernovae. Time-dependent fits to the extinction profile reveal no evidence of dust destruction and limit the decrease in the extinction column to Delta A_3000 < 0.54 mag after t = 50 s in the rest frame. Our observations provide evidence of a transition in dust properties at z~5, in agreement with studies of high-z quasars, and suggest that SN-formed dust continues to dominate the opacity of typical galaxies at this redshift.Comment: Resubmitted to MNRAS following referee report. Contains additional figure and some extra analysis/discussio

Bar Evolution Over the Last Eight Billion Years: A Constant Fraction of Strong Bars in GEMS

One third of present-day spirals host optically visible strong bars that drive their dynamical evolution. However, the fundamental question of how bars evolve over cosmological times has yet to be addressed, and even the frequency of bars at intermediate redshifts remains controversial. We investigate the frequency of bars out to z~1.0 drawing on a sample of 1590 galaxies from the GEMS survey, which provides morphologies from HST ACS two-color images, and highly accurate redshifts from the COMBO-17 survey. We identify spiral galaxies using the Sersic index, concentration parameter, and rest-frame color. We characterize bars and disks by fitting ellipses to F606W and F850LP images, taking advantage of the two bands to minimize bandpass shifting. We exclude highly inclined (i>60 deg) galaxies to ensure reliable morphological classifications, and apply completeness cuts of M_v <= -19.3 and -20.6. More than 40% of the bars that we detect have semi major axes a<0.5" and would be easily missed in earlier surveys without the small PSF of ACS. The bars that we can reliably detect are fairly strong (with ellipticities e>=0.4) and have a in the range ~1.2-13 kpc. We find that the optical fraction of such strong bars remains at ~(30% +- 6%) from the present-day out to look-back times of 2-6 Gyr (z~0.2-0.7) and 6-8 Gyr (z~0.7-1.0); it certainly shows no sign of a drastic decline at z>0.7. Our findings of a large and similar bar fraction at these three epochs favor scenarios in which cold gravitationally unstable disks are already in place by z~1, and where on average bars have a long lifetime (well above 2 Gyr). The distributions of structural bar properties in the two slices are, however, not statistically identical and therefore allow for the possibility that the bar strengths and sizes may evolve over time.Comment: Accepted by ApJ Letters, to appear in Nov 2004 issue. Minor revisions,updated reference

The disruption of Celf6, a gene identified by translational profiling of serotonergic neurons, results in autism-related behaviors

The immense molecular diversity of neurons challenges our ability to understand the genetic and cellular etiology of neuropsychiatric disorders. Leveraging knowledge from neurobiology may help parse the genetic complexity: identifying genes important for a circuit that mediates a particular symptom of a disease may help identify polymorphisms that contribute to risk for the disease as a whole. The serotonergic system has long been suspected in disorders that have symptoms of repetitive behaviors and resistance to change, including autism. We generated a bacTRAP mouse line to permit translational profiling of serotonergic neurons. From this, we identified several thousand serotonergic-cell expressed transcripts, of which 174 were highly enriched, including all known markers of these cells. Analysis of common variants near the corresponding genes in the AGRE collection implicated the RNA binding protein CELF6 in autism risk. Screening for rare variants in CELF6 identified an inherited premature stop codon in one of the probands. Subsequent disruption of Celf6 in mice resulted in animals exhibiting resistance to change and decreased ultrasonic vocalization as well as abnormal levels of serotonin in the brain. This work provides a reproducible and accurate method to profile serotonergic neurons under a variety of conditions and suggests a novel paradigm for gaining information on the etiology of psychiatric disorders