Theoretical Modelling and Experimental Studies of Synchrotron Radiation Induced Molecular Dissociation Processes

Siirretty Doriast

Monte-Carlo Determination of Dose Rates In Spherical Pressurized Water Reactor Shield

The nuclear reactor emits various kinds of nuclear radiations during operation. However, the main contributions to the radiation field in the reactor are given by neutrons and gamma rays. These radiation components are the principal concern of reactor shielding. In our study the neutron and gamma radiation dose rates at different depths in concrete bio-shield of the PWR were calculated based on spherical model for M-C simulation with using MCNP4C2. The simulation results were compared with  the results obtained from calculations based on S$_{8}$P$_{3}$ spherical approximation with using the ANISN code

Gas-phase study on uridine: Conformation and X-ray photofragmentation

Fragmentation of RNA nucleoside uridine, induced by carbon 1s core ionization, has been studied. The measurements by combined electron and ion spectroscopy have been performed in gas phase utilizing synchrotron radiation. As uridine is a combination of d-ribose and uracil, which have been studied earlier with the same method, this study also considers the effect of chemical environment and the relevant functional groups. Furthermore, since in core ionization the initial core hole is always highly localized, charge migration prior to fragmentation has been studied here. This study also demonstrates the destructive nature of core ionization as in most cases the C 1s ionization of uridine leads to concerted explosions producing only small fragments with masses ≤43 amu. In addition to fragmentation patterns, we found out that upon evaporation the sugar part of the uridine molecule attains hexagonal formFinancial support from the Academy of Finland, the European COST Action XLIC CM1204 and the EU Transnational Access to Research Infrastructures programme. Computational resources from the FGI project (Finland) are acknowledged. D.T.H. acknowledges the Finnish Cultural Foundation for funding and the MINECO Project No. FIS2013-42002- R. E.R. acknowledges funding from the Swedish Research Council (VR

X-ray Absorption Fine Structure of bcc Crystals Studied Based on High-order Expanded Debye-Waller Factors

In this work, X-ray absorption fine structure (XAFS) of bcc crystals and it Fourier transformmagnitude have been studied based on the anharmonic correlated Debye model high-order expandedDebye-Waller factors. The many-body effects are taken into account in the present one-dimensionalmodel based on the anharmonic effective potential that includes interactions of absorber andbackscatterer atoms with their first shell near neighbors, where Morse potential is assumed to describethe single-pair atomic interaction. Analytical expressions of four first temperature-dependent cumulantsof bcc crystals have been derived using the many-body perturbation approach. The obtained cumulantsare applied to calculating XAFS spectra and their Fourier transform magnitudes. Numerical results forFe are found to be in good agreement with experiment

Isolation an agar degradation Bacillus sp. AT6 and preliminary application for seaweed saccharification

Background: Agar is a common polysaccharide found in nature. However, agar is strongly resisted to the degradation processing, leading to limitation of its application in various areas. Thus, finding an effective solution for agar saccharification significantly improves the economically effects of agar based substrates.Methods: Soil samples were collected from TienPhong Forestry Ltd. Company, ThuyXuan District, ThuaThien Hue province, Vietnam. Potential agar degrading bacteria were screened on a mineral salt agar medium. The isolate was identified based on 16S rRNA nucleotide sequence, morphological, physiological, and biochemical characteristics. Agarase production was evaluated by modification culture conditions including incubation time, shaking speed, and initial inoculum size. Molecular mass of extracellular agarase was determined by native SDS-PAGE. The effect of pH, temperature, metal ions, and organic solvents were conducted for enzyme characterization. Application of enzyme was investigated on seaweed saccharification.Result: An agar degrading bacterial strain was isolated from soils and identified as Bacillus sp. AT6. Maximal agarase accumulation obtained in the culture containing an inoculum size of 10% (v/v), shaking speed of 210 rpm, and 96 hours incubation. The agarase revealed a single band on zymogram analysis with an apparent molecular weight of 180 kDa. The optimal temperature and pH were 40°C and pH 8.0, respectively. All tested metal ions and organic solvents partially decreased enzyme activity. Treatment seaweed by agarase resulted in reducing sugars release present in the reaction, indicating the saccharification of seaweed was succeeded.Conclusion: Bacillus sp. AT6 is a new report of agarolytic bacteria that produces extracellular agarase enzymes. The present results promise strain AT6 is a great candidate for agar saccharification for industrial application

The status of southern white-cheeked gibbon (Nomascus siki) in Truong Son key biodiversity area

The Southern white-cheeked crested gibbon, Nomascus siki, is an endemic primate to Vietnam and Laos, and has been identified as a nationally and globally endangered species (EN). However, little information is known on the status of the species in Vietnam generally and in the Truong Son key biodiversity area (Truong Son KBA) particularly. In order to explore the current status of the species in the Truong Son KBA, we conducted field surveys in 2018 and 2019. Analysis of the survey data shows 149 groups of gibbon in the 4 study areas. Combined with results of similar-techniqued survey in 2016 on the same species in Khe Nuoc Trong forest, we identified at least 252 gibbon groups and estimated 425 gibbon groups in the entire Truong Son KBA. These gibbon groups are mainly distributed in medium-rich evergreen closed forests in mountainous areas of the west Truong Son KBA, adjacent to the Vietnam-Laos border.

Using cassava waste of the cassava starch processing as food for raising African Nightcrawler (Eudrilus eugeniae) to obtain vermicomposting and earthworm biomass

The raising earthworms by cassava waste is a useful solution to reduce environmental pollution caused by cassava starch processing. In this study, cassava waste (including cassava peel, cassava pieces and soil) was used as a food source for raising African Nightcrawler (Eudrilus eugeniae) with three experiments: E1, earthworms were raised in crushed cassava waste right after being discharged; E2, earthworms raised in crushed cassava waste that had been incubated with organic matter after decomposing microbiological preparation for the previous two weeks; E3, earthworms were raised in crushed cassava waste that had self-decomposed naturally for the previous two weeks. The cassava waste was decomposed naturally for 4 weeks for control. The results showed that the content of organic matter, humic acid and total nitrogen in organic cassava humus, obtaining from experiments, increased compared to the control; the total organic matter content reached from 10.4%-15.7%, higher than the control (8.2%) from 1.27-1.92 times, humic acid content reached 0.6 - 0.8% and total nitrogen reached 0.3%. Experiment 3 had the highest quality of humus (organic matter content 15.7%, total nitrogen 0.3%, humic acid 0.7% and fulvic acid 0.5%). The experiment 3 also had the highest earthworm biomass (3.6kg), increasing 30.5% compared to experiment 1 and 19.4% comparing to experiment 2. Therefore, experiment 3 was proposed for application in treatment of cassava waste at larger scale. The organic humus obtaining from raising earthworms by cassava waste can be used as raw material for vermicompost production. The earthworm biomass can be used as protein-rich food for domestic animals (such as chicken, tortoise, eel, fish, etc) or used as nutritious fertilizer.Nuôi giun bằng phế liệu sắn là giải pháp hữu ích nhằm giảm thiểu ô nhiễm môi trường do chế biến tinh bột sắn gây ra. Trong nghiên cứu này, bã thải sắn (bao gồm vỏ, đầu mẩu sắn và bùn đất) được sử dụng làm nguồn thức ăn giun đất Châu Phi (African Nightcrawler (Eudrilus eugeniae) với các thí nghiệm như sau: Thí nghiệm 1: Giun quế được nuôi trong bã thải sắn nghiền ngay sau khi được loại bỏ; Thí nghiệm 2: giun đất được nuôi trong bã thải sắn nghiền đã được ủ với chế phẩm vi sinh phân hủy chất hữu cơ trong hai tuần trước đó; Thí nghiệm 3: Giun đất được nuôi trong bã thải sắn nghiền được để tự phân hủy tự nhiên trong hai tuần trước đó. Đối chứng là bã thải sắn để phân hủy tự nhiên trong 4 tuần. Bên cạnh đó, bã thải sắn nghiền còn được ủ bằng chế phẩm vi sinh phân hủy chất hữu cơ trong 4 tuần để cung cấp thêm số liệu so sánh giữa các thí nghiệm (Thí nghiệm 4). Các thí nghiệm được theo dõi trong 4 tuần. Kết quả cho thấy: Kết quả cho thấy: hàm lượng chất hữu cơ, axit humic và nitơ tổng trong mùn sắn hữu cơ thu được từ thí nghiệm đều tăng so với đối chứng: hàm lượng chất hữu cơ tổng số đạt từ 10,4% -15,7%, cao hơn đối chứng (8,2%) so với 1,27-1,92 lần, hàm lượng axit humic đạt 0,6 - 0,8% và nitơ tổng số đạt 0,3%. Trong đó, thí nghiệm 3 có chất lượng mùn cao nhất (hàm lượng chất hữu cơ 15,7%, đạm tổng số 0,3%, axit humic 0,7% và axit fulvic 0,5%). Thí nghiệm 3 cũng có sinh khối giun quế cao nhất (3,6kg), tăng 30,5% so với thí nghiệm 1 và 19,4% so với thí nghiệm 2. Do đó, thí nghiệm 3 đã được đề xuất ứng dụng để xử lý phế thải sắn ở quy mô lớn hơn. Chất mùn hữu cơ thu được từ việc nuôi trùn quế bằng phế thải sắn có thể được sử dụng làm nguyên liệu để sản xuất phân trùn quế. Sinh khối trùn quế có thể dùng làm thức ăn giàu đạm cho vật nuôi (như gà, ba ba, lươn, cá ...) hoặc làm phân bón dinh dưỡng

Light Absorption and Luminescence Properties of the Blend Poly(N-vinylcarbazole)/Poly(N-hexylthiophene)

We have investigated the enhancement absorption light and luminescence properties of the blend conducting polymers using poly(N-vinylcarbazole) and poly(N-hexylthiophene). The optimized material showed a broad absorption in the region of ultra violet to near infra-red and the better of luminescence ability than the pristine conducting polymers. The remarkable improvements in photoluminescences of the blends provide useful information to the application of this material in fabrication of optical – electronic devices.

Ionization-site effects on the photofragmentation of chloro- and bromoacetic acid molecules

Fragmentation of gas-phase chloro- and bromoacetic acid samples, particularly its dependency on the atomic site of the initial core ionization, was studied in photoelectron-photoion-photoion coincidence (PEPIPICO) measurements. The fragmentation was investigated after ionizing carbon 1s and bromine 3d or chlorine 2p core orbitals. It was observed that the samples had many similar fragmentation pathways and that their relative weights depended strongly on the initial ionization site. Additional Auger PEPIPICO measurements revealed a clear dependence of fragment pair intensities on the kinetic energy of the emitted Auger electrons. The modeled and measured Auger electron spectra indicated that the average internal energy of the molecule was larger following the carbon 1s core-hole decay than after the decay of the halogen core hole. This difference in the internal energies was found to be the source of the site-dependent photofragmentation behavior.</p

Short Tandem Repeats Used in Preimplantation Genetic Testing of Î’-Thalassemia: Genetic Polymorphisms For 15 Linked Loci in the Vietnamese Population

BACKGROUND: β-thalassemia is one of the most common monogenic diseases worldwide. Preimplantation genetic testing (PGT) of β-thalassemia is performed to avoid affected pregnancies has become increasingly popular worldwide. In which, the indirect analysis using short tandem repeat (STRs) linking with HBB gene to detect different β-globin (HBB) gene mutation is a simple, accurate, economical and also provides additional control of contamination and allele-drop-out ADO. AIM: This study established microsatellite markers for PGT of Vietnamese β-thalassemia patient. METHODS: Fifteen (15) STRs gathered from 5 populations were identified by in silico tools within 1 Mb flanking the HBB gene. The multiplex PCR reaction was optimized and performed on 106 DNA samples from at-risk families. RESULTS: After estimating, PIC values were ≥ 0.7 for all markers, with expected heterozygosity and observed heterozygosity values ranged from 0.81 to 0.92 and 0.53 to 0.86, respectively. One hundred percent of individuals had at least seven heterozygous markers and were found to be heterozygous for at least two markers on either side of the HBB gene. The STRs panel was successfully performed on one at-risk family. CONCLUSION: In general, a pentadecaplex marker (all &lt; 1 Mb from the HBB gene) assay was constituted for β-thalassemia PGT on Vietnamese population