Common-reflection-surface imaging of shallow and ultrashallow reflectors

We analyzed the feasibility of the common-reflection-surface (CRS) stack for near-surface surveys as an alternative to the conventional common midpoint (CMP) stacking procedure. The data-driven, less user-interactive CRS method could be more cost efficient for shallow surveys, where the high sensitivity to velocity analysis makes data processing a critical step. We compared the results for two field data sets collected to image shallow and ultrashallow reflectors: an example of shallow Pwave reflection for targets in the first few hundred meters, and an example of SH-wave reflection for targets in the first 10 m. By processing the shallow P-wave records using the CMP method, we imaged several nearly horizontal reflectors with onsets from 60 to about 250 ms. The CRS stack produced a stacked section more suited for a subsurface interpretation, without any preliminary formal and time-consuming velocity analysis, because the imaged reflectors possessed greater coherency and lateral continuity. With CMP processing of the SHwave records, we imaged a dipping bedrock interface below four horizontal reflectors in unconsolidated, very low velocity sediments. The vertical and lateral resolution was very high, despite the very shallow depth: the image showed the pinchout of two layers at less than 10 m depth. The numerous traces used by the CRS stack improved the continuity of the shallowest reflector, but the deepest overburden reflectors appear unresolved, with not well-imaged pinchouts. Using the kinematic wavefield attributes determined for each stacking operation, we retrieved velocity fields fitting the stacking velocities we had estimated in the CMP processing. The use of CRS stack could be a significant step ahead to increase the acceptance of the seismic reflection method as a routine investigation method in shallow and ultrashallow seismics

Dynamic attentional modulation of vision across space and time after right hemisphere stroke and in ageing

This article is available open access and is shared under a Creative Commons licence (http://creativecommons.org/licenses/by/3.0/). Copyright @ 2012 Elsevier Ltd.Introduction - Attention modulates the availability of sensory information to conscious perception. In particular, there is evidence of pathological, spatial constriction of the effective field of vision in patients with right hemisphere damage when a central task exhausts available attentional capacity. In the current study we first examined whether this constriction might be modulated across both space and time in right hemisphere stroke patients without neglect. Then we tested healthy elderly people to determine whether non-pathological ageing also leads to spatiotemporal impairments of vision under conditions of high attention load. Methods - Right hemisphere stroke patients completed a task at fixation while attempting to discriminate letters appearing in the periphery. Attentional load of the central task was modulated by increasing task difficulty. Peripheral letters appeared simultaneously with the central task or at different times (stimulus onset asynchronies, SOAs) after it. In a second study healthy elderly volunteers were tested with a modified version of this paradigm. Results - Under conditions of high attention load right hemisphere stroke patients have a reduced effective visual field, over a significantly extended ‘attentional blink’, worse for items presented to their left. In the second study, older participants were unable to discriminate otherwise salient items across the visual field (left or right) when their attention capacity was loaded on the central task. This deficit extended temporally, with peripheral discrimination ability not returning to normal for up to 450 msec. Conclusions - Dynamically tying up attention resources on a task at fixation can have profound effects in patient populations and in normal ageing. These results demonstrate that items can escape conscious detection across space and time, and can thereby impact significantly on visual perception in these groups.The European Commission, Brunel University and the Wellcome Trust

Inversion of electrical conductivity data with Tikhonov regularization approach: some considerations

Electromagnetic induction measurements, which are generally used to determine lateral variations of apparent electrical conductivity, can provide quantitative estimates of the subsurface conductivity at different depths. Quantitative inference about the Earth's interior from experimental data is, however, an ill-posed problem. Using the generalised McNeill's theory for the EM38 ground conductivity meter, we generated synthetic apparent conductivity curves (input data vector) simulating measurements at different heights above the soil surface. The electrical conductivity profile (the Earth model) was then estimated solving a least squares problem with Tikhonov regularization optimised with a projected conjugate gradient algorithm. Although the Tikhonov approach improves the conditioning of the resulting linear system, profile reconstruction can be surprisingly far from the desired true one. On the contrary, the projected conjugate gradient provided the best solution without any explicit regularization ( a= 0) of the objective function of the least squares problem. Also, if the initial guess belongs to the image of the system matrix, Im(A), we found that it provides a unique solution in the same subspace Im(A)

Dietary Nitrate: Effects on the health of weaning pigs and Antimicrobial activity on seven probiotic Bifidobacterium spp. strains

The potential role of nitrite as an antimicrobial substance in the stomach may be of some importance in the ecology of the gastrointestinal tract and in host physiology. It has been shown that nitrite, under the acidic conditions of the stomach, may kill gut pathogens like Salmonella enteritidis, Escherichia coli, Salmonella typhimurium, and Yersinia enterocolitica, whereas acid alone has only a bacteriostatic effect. An in vivo study was conducted in order to assess the effects of dietary nitrate on microbiota and on the health of the gut (particularly in the stomach and small intestine). 96 weaning pigs were fed a diet containing high nitrate levels (15 mg and 150 mg) and then challenged with Salmonella enterica serovar typhimurium. Differences in composition of the gut microbiota were assessed by analysing samples from the pigs: To date analysis of 48 pigs has been completed.. Preliminary results demonstrated no effect on the population densities of microbial groups either from the challenge or from nitrate intake. However, increasing the time from challenge decreased either the counts of LAB in the stomach and jejunum or of clostridia in the stomach. Bifidobacteria also decreased in the stomach contents as nitrate supplementation increased. Supplementing the feedstuff with high dietary nitrate intake and then challenging with Salmonella did not affect the gastric pH or the degree of ulceration in the pigs. The synergistic bactericidal effects of pH, nitrite and thiocyanate on seven probiotic Bifidobacterium spp. strains were also investigated in an in vitro study. The results of the in vitro study demonstrated that an inhibitory effect exists on the seven probiotic bifidobacteria investigated with an exposure longer than 2 hours and pH values < 5.0. Addition of thiocyanate also increased the susceptibility of the tested strains. In this in vitro study, the most resistant strains at all conditions were B. animalis subsp. lactis Ra 18 and P32 and B. choerinum Su 877, Su 837 and Su 891

Assessing the impact of seasonal-rainfall anomalies on catchment-scale water balance components

Abstract. Although water balance components at the catchment scale are strongly related to annual rainfall, the availability of water resources in Mediterranean catchments also depends on rainfall seasonality. Observed seasonal anomalies in historical records are fairly episodic, but an increase in their frequency might exacerbate water deficit or water excess if the rainy season shortens or extends its duration, e.g., due to climate change. This study evaluates the sensitivity of water yield, evapotranspiration, and groundwater recharge to changes in rainfall seasonality by using the Soil Water Assessment Tool (SWAT) model applied to the upper Alento River catchment (UARC) in southern Italy, where a long time series of daily rainfall is available from 1920 to 2018. We compare two distinct approaches: (i) a "static" approach, where three seasonal features (namely rainy, dry, and transition fixed-duration 4-month seasons) are identified through the standardized precipitation index (SPI) and (ii) a "dynamic" approach based on a stochastic framework, where the duration of two seasons (rainy and dry seasons) varies from year to year according to a probability distribution. Seasonal anomalies occur when the transition season is replaced by the rainy or dry season in the first approach and when season duration occurs in the tails of its normal distribution in the second approach. Results are presented within a probabilistic framework. We also show that the Budyko curve is sensitive to the rainfall seasonality regime in UARC by questioning the implicit assumption of a temporal steady state between annual average dryness and the evaporative index. Although the duration of the rainy season does not exert a major control on water balance, we were able to identify season-dependent regression equations linking water yield to the dryness index in the rainy season

Comparative evaluation of image reconstruction methods for the siemens PET-MR scanner using the stir library

With the introduction of Positron Emission Tomography - Magnetic Resonance (PET-MR) scanners the development of new algorithms and the comparison of the performance of different iterative reconstruction algorithms and the characteristics of the reconstructed images data is relevant. In this work, we perform a quantitative assessment of the currently used ordered subset (OS) algorithms for low-counts PET-MR data taken from a Siemens Biograph mMR scanner using the Software for Tomographic Image Reconstruction (STIR, stir.sf.net). A comparison has been performed in terms of bias and coefficient of variation (CoV). Within the STIR library different algorithms are available, such as Order Subsets Expectation Maximization (OSEM), OS Maximum A Posteriori One Step Late (OSMAPOSL) with Quadratic Prior (QP) and with Median Root Prior (MRP), OS Separable Paraboloidal Surrogate (OSSPS) with QP and Filtered Back-Projection (FBP). In addition, List Mode (LM) reconstruction is available. Corrections for attenuation, scatter and random events are performed using STIR instead of using the scanner. Data from the Hoffman brain phantom are acquired, processed and reconstructed. Clinical data from the thorax of a patient have also been reconstructed with the same algorithms. The number of subsets does not appreciably affect the bias nor the coefficient of variation (CoV=11%) at a fixed sub-iteration number. The percentage relative bias and CoV maximum values for OSMAPOSL-MRP are 10% and 15% at 360 s acquisition and 12% and 15% for the 36 s, whilst for OSMAPOSL-QP they are 6% and 16% for 360 s acquisition and 11% and 23% at 36 s and for OSEM 6% and 11% for the 360 s acquisition and 10% and 15% for the 36 s. Our findings demonstrate that when it comes to low-counts, noise and bias become significant. The methodology for reconstructing Siemens mMR data with STIR is included in the CCP-PET-MR website

Life Cycle Assessment (LCA): New poplar clones allow an environmentally sustainable cultivation

In Italy 72 poplar clones ( Populus spp.) are registered for commercialization. They were selected for fast growth, stem shape and disease resistance. The new selections (named MSA) includes genotypes with very high resistance to all the main diseases and to one insect, Phloeomizus passerinii (Sign.). Fast growth and disease resistance allow to produce wood with low environmental and economic costs; for this reason in some Italian Regions the introduction of a percentage of these clones in poplar stand is mandatory to obtain funding for their establishment (Rural Development Plan). To better understand the environmental advantages deriving from the use of these clones, in comparison with the old genotypes (particularly ‘I-214’), a ‘Life Cycle Assessment’ approach was applied considering as impact indicator the CO 2 equivalent emissions; from stoolbed to commercial stand, primary data were collected from an Italian experience. Firstly with the Inventory Analysis all the raw material, energy, wastes and emissions related were collected for each cultivation phase. The Analysis showed a reduction of 9% of CO 2 eq. ha -1 emitted, growing MSA instead of ‘I-214’. Considering the emissions per volume of wood, ‘I-214’ requests 47.5 kg CO 2 eq. per m 3 , compared with MSA that request 36.6 kg CO 2 eq. per m 3

Recent Progress in STIR 5.0

STIR is an open source software for Emission Tomography data manipulation and image reconstruction, covering both PET and SPECT. In this work recent additions to the STIR code base are highlighted, namely the ability to read General Electric (GE) Raw Data Format 9 (RDF9) files, incorporation of GPU operators for forward and back projection, as well as work towards quantitative imaging for both PET and SPECT