Dictionary matching in a stream

We consider the problem of dictionary matching in a stream. Given a set of strings, known as a dictionary, and a stream of characters arriving one at a time, the task is to report each time some string in our dictionary occurs in the stream. We present a randomised algorithm which takes O(log log(k + m)) time per arriving character and uses O(k log m) words of space, where k is the number of strings in the dictionary and m is the length of the longest string in the dictionary

Post-Newtonian constraints on f(R) cosmologies in metric formalism

We compute the complete post-Newtonian limit of the metric form of f(R) gravities using a scalar-tensor representation. By comparing the predictions of these theories with laboratory and solar system experiments, we find a set of inequalities that any lagrangian f(R) must satisfy. The constraints imposed by those inequalities allow us to find explicit bounds to the possible nonlinear terms of the lagrangian. We conclude that the lagrangian f(R) must be almost linear in R and that corrections that grow at low curvatures are incompatible with observations. This result shows that modifications of gravity at very low cosmic densities cannot be responsible for the observed cosmic speed-up.Comment: 10 pages, no figures, revtex

Pattern Matching in Multiple Streams

We investigate the problem of deterministic pattern matching in multiple streams. In this model, one symbol arrives at a time and is associated with one of s streaming texts. The task at each time step is to report if there is a new match between a fixed pattern of length m and a newly updated stream. As is usual in the streaming context, the goal is to use as little space as possible while still reporting matches quickly. We give almost matching upper and lower space bounds for three distinct pattern matching problems. For exact matching we show that the problem can be solved in constant time per arriving symbol and O(m+s) words of space. For the k-mismatch and k-difference problems we give O(k) time solutions that require O(m+ks) words of space. In all three cases we also give space lower bounds which show our methods are optimal up to a single logarithmic factor. Finally we set out a number of open problems related to this new model for pattern matching.Comment: 13 pages, 1 figur

Free subgroups of one-relator relative presentations

Suppose that G is a nontrivial torsion-free group and w is a word over the alphabet G\cup\{x_1^{\pm1},...,x_n^{\pm1}\}. It is proved that for n\ge2 the group \~G= always contains a nonabelian free subgroup. For n=1 the question about the existence of nonabelian free subgroups in \~G is answered completely in the unimodular case (i.e., when the exponent sum of x_1 in w is one). Some generalisations of these results are discussed.Comment: V3: A small correction in the last phrase of the proof of Theorem 1. 4 page

Workshop on the Polar Regions of Mars: Geology, Glaciology, and Climate History, part 1

Papers and abstract of papers presented at the workshop are presented. Some representative titles are as follows: Glaciation in Elysium; Orbital, rotational, and climatic interactions; Water on Mars; Rheology of water-silicate mixtures at low temperatures; Evolution of the Martian atmosphere (the role of polar caps); Is CO2 ice permanent; Dust transport into Martian polar latitudes; Mars observer radio science (MORS) observations in polar regions; and Wind transport near the poles of Mars (timescales of changes in deposition and erosion)

Response to the Letter to the Editor

This paper has attracted interest around the world from the media (both TV and newspapers). In addition, we have received letters, emails and telephone calls. One of our favorites was a voicemail message asking us to return a call to Australia at which point we would learn who really killed JFK. We welcome the opportunity to respond to the letter to the editor from Mr. Fiorentino. Mr. Fiorentino claims that our ``statement relating to the likelihood of a second assassin based on the premise of three or more separate bullets is demonstrably false.'' In response we would like to simply quote from page 327 of Gerald Posner's book Case Closed, one of the most well known works supporting the single assassin theory: ``If Connally was hit by another bullet, it had to be fired from a second shooter, since the Warren Commission's own reconstructions showed that Oswald could not have operated the bolt and refired in 1.4 seconds.'' Mr. Fiorentino also claims that the ``second fatal flaw is the use of a rather uncomplicated formula based on Bayes Theorem.'' Let $E$ denote the evidence and $T$ denote the theory that there were just two bullets (and hence a single shooter). We used Bayes Theorem to hypothetically calculate $P(T|E)$ from $P(E|T)$ and the prior probability $P(T)$. In order to make $P(T|E)$ ten times more likely than $P(\bar{T}|E)$, the ratio of the prior probabilities [i.e., $P(T) / P(\bar{T})$] would have to be greater than 15. Thus, we again conclude that this casts serious doubt on Dr. Guinn's conclusion that the evidence supported just two bullets. Sadly, this is far from the first time that probability has been misunderstood and/or misapplied in a case of public interest. A notable British example is the Clark case. See Nobles and Schiff (2005) for details. Finally, we welcome and, in fact, encourage members of the scientific community to provide alternative analyses of the data.Comment: Published in at http://dx.doi.org/10.1214/07-AOAS154 the Annals of Applied Statistics (http://www.imstat.org/aoas/) by the Institute of Mathematical Statistics (http://www.imstat.org

Non-equilibrium microtubule fluctuations in a model cytoskeleton

Biological activity gives rise to non-equilibrium fluctuations in the cytoplasm of cells; however, there are few methods to directly measure these fluctuations. Using a reconstituted actin cytoskeleton, we show that the bending dynamics of embedded microtubules can be used to probe local stress fluctuations. We add myosin motors that drive the network out of equilibrium, resulting in an increased amplitude and modified time-dependence of microtubule bending fluctuations. We show that this behavior results from step-like forces on the order of 10 pN driven by collective motor dynamics

Piezoelectric-based apparatus for strain tuning

We report the design and construction of piezoelectric-based apparatus for applying continuously tuneable compressive and tensile strains to test samples. It can be used across a wide temperature range, including cryogenic temperatures. The achievable strain is large, so far up to 0.23% at cryogenic temperatures. The apparatus is compact and compatible with a wide variety of experimental probes. In addition, we present a method for mounting high-aspect-ratio samples in order to achieve high strain homogeneity.Comment: 8 pages, 8 figure

On gravitational-wave spectroscopy of massive black holes with the space interferometer LISA

Newly formed black holes are expected to emit characteristic radiation in the form of quasi-normal modes, called ringdown waves, with discrete frequencies. LISA should be able to detect the ringdown waves emitted by oscillating supermassive black holes throughout the observable Universe. We develop a multi-mode formalism, applicable to any interferometric detectors, for detecting ringdown signals, for estimating black hole parameters from those signals, and for testing the no-hair theorem of general relativity. Focusing on LISA, we use current models of its sensitivity to compute the expected signal-to-noise ratio for ringdown events, the relative parameter estimation accuracy, and the resolvability of different modes. We also discuss the extent to which uncertainties on physical parameters, such as the black hole spin and the energy emitted in each mode, will affect our ability to do black hole spectroscopy.Comment: 44 pages, 21 figures, 10 tables. Minor changes to match version in press in Phys. Rev.

Inspecting the Higgs for New Weakly Interacting Particles

We explore new physics scenarios which are optimally probed through precision Higgs measurements rather than direct collider searches. Such theories consist of additional electroweak charged or singlet states which couple directly to or mix with the Higgs boson; particles of this kind may be weakly constrained by direct limits due to their meager production rates and soft decay products. We present a simplified framework which characterizes the effects of these states on Higgs physics by way of tree level mixing (with neutral scalars) and loop level modifications (from electrically charged states), all expressed in terms of three mixing angles and three loop parameters, respectively. The theory parameters are constrained and in some cases even fixed by ratios of Higgs production and decay rates. Our setup is simpler than a general effective operator analysis, in that we discard parameters irrelevant to Higgs observables while retaining complex correlations among measurements that arise due to the underlying mixing and radiative effects. We show that certain correlated observations are forbidden, e.g. a depleted ratio of Higgs production from gluon fusion versus vector boson fusion together with a depleted ratio of Higgs decays to bb[over-bar] versus WW. Moreover, we study the strong correlation between the Higgs decay rate to γγ and WW and how it can be violated in the presence of additional electrically charged particles. Our formalism maps straightforwardly onto a variety of new physics models, such as the NMSSM. We show, for example, that with a Higgsino of mass m_(χ ± 1) ≳ 100 GeV and a singlet-Higgs coupling of λ = 0.7, the photon signal strength can deviate from the vector signal strength by up to ∼ 40 − 60% while depleting the vector signal strength by only 5 − 15% relative to the Standard Model