Architecture of coatomer: Molecular characterization of delta-COP and protein interactions within the complex

Copyright © 2011 by The Rockefeller University Press.Coatomer is a cytosolic protein complex that forms the coat of COP I-coated transport vesicles. In our attempt to analyze the physical and functional interactions between its seven subunits (coat proteins, [COPs] alpha-zeta), we engaged in a program to clone and characterize the individual coatomer subunits. We have now cloned, sequenced, and overexpressed bovine alpha-COP, the 135-kD subunit of coatomer as well as delta-COP, the 57-kD subunit and have identified a yeast homolog of delta-COP by cDNA sequence comparison and by NH2-terminal peptide sequencing. delta-COP shows homologies to subunits of the clathrin adaptor complexes AP1 and AP2. We show that in Golgi-enriched membrane fractions, the protein is predominantly found in COP I-coated transport vesicles and in the budding regions of the Golgi membranes. A knock-out of the delta-COP gene in yeast is lethal. Immunoprecipitation, as well as analysis exploiting the two-hybrid system in a complete COP screen, showed physical interactions between alpha- and epsilon-COPs and between beta- and delta-COPs. Moreover, the two-hybrid system indicates interactions between gamma- and zeta-COPs as well as between alpha- and beta' COPs. We propose that these interactions reflect in vivo associations of those subunits and thus play a functional role in the assembly of coatomer and/or serve to maintain the molecular architecture of the complex.This work was supported by The Deutsche Forschungsgemeinschaft (SFB 352), the Human Frontier Science Program, and the Swiss National Science Foundation No. 31-43366.95

Nonlinear and time-resolved optical study of the 112-type iron-based superconductor parent Ca_(1−x)La_xFeAs_2 across its structural phase transition

The newly discovered 112-type ferropnictide superconductors contain chains of As atoms that break the tetragonal symmetry between the ɑ and b axes. This feature eliminates the need for uniaxial strain that is usually required to stabilize large single domains in the electronic nematic state that exists in the vicinity of magnetic order in the iron-based superconductors. We report detailed structural symmetry measurements of 112-type Ca_(0.73)La_(0.27)FeAs_2 using rotational anisotropy optical second-harmonic generation. This technique is complementary to diffraction experiments and enables a precise determination of the point-group symmetry of a crystal. By combining our measurements with density functional theory calculations, we uncover a strong optical second-harmonic response of bulk electric dipole origin from the Fe and Ca 3d-derived states that enables us to assign C_2 as the crystallographic point group. This makes the 112-type materials high-temperature superconductors without a center of inversion, allowing for the possible mixing of singlet and triplet Cooper pairs in the superconducting state. We also perform pump-probe transient reflectivity experiments that reveal a 4.6-THz phonon mode associated with the out-of-plane motion of As atoms in the FeAs layers. We do not observe any suppression of the optical second-harmonic response or shift in the phonon frequency upon cooling through the reported monoclinic-to-triclinic transition at 58 K. This allows us to identify C_1 as the low-temperature crystallographic point group but suggests that structural changes induced by long-range magnetic order are subtle and do not significantly affect electronic states near the Fermi level

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Who I Am: The Meaning of Early Adolescents’ Most Valued Activities and Relationships, and Implications for Self-Concept Research

Self-concept research in early adolescence typically measures young people’s self-perceptions of competence in specific, adult-defined domains. However, studies have rarely explored young people’s own views of valued self-concept factors and their meanings. For two major self domains, the active and the social self, this mixed-methods study identified factors valued most by 526 young people from socioeconomically diverse backgrounds in Ireland (10-12 years), and explored the meanings associated with these in a stratified subsample (n = 99). Findings indicate that self-concept scales for early adolescence omit active and social self factors and meanings valued by young people, raising questions about content validity of scales in these domains. Findings also suggest scales may under-represent girls’ active and social selves; focus too much on some school-based competencies; and, in omitting intrinsically salient self domains and meanings, may focus more on contingent (extrinsic) rather than true (intrinsic) self-esteem

Evidence of an improper displacive phase transition in Cd2_2Re2_2O7_7 via time-resolved coherent phonon spectroscopy

We have used a combination of ultrafast coherent phonon spectroscopy, ultrafast thermometry, and time-dependent Landau theory to study the inversion symmetry breaking phase transition at $T_c = 200$ K in the strongly spin-orbit coupled correlated metal Cd$_2$Re$_2$O$_7$. We establish that the structural distortion at $T_c$ is a secondary effect through the absence of any softening of its associated phonon mode, which supports a purely electronically driven mechanism. However, the phonon lifetime exhibits an anomalously strong temperature dependence that decreases linearly to zero near $T_c$. We show that this behavior naturally explains the spurious appearance of phonon softening in previous Raman spectroscopy experiments and should be a prevalent feature of correlated electron systems with linearly coupled order parameters.Comment: 5 pages main text, 5 figures, 7 pages supplementary informatio

Fractal Noise in Quantum Ballistic and Diffusive Lattice Systems

We demonstrate fractal noise in the quantum evolution of wave packets moving either ballistically or diffusively in periodic and quasiperiodic tight-binding lattices, respectively. For the ballistic case with various initial superpositions we obtain a space-time self-affine fractal $\Psi(x,t)$ which verify the predictions by Berry for "a particle in a box", in addition to quantum revivals. For the diffusive case self-similar fractal evolution is also obtained. These universal fractal features of quantum theory might be useful in the field of quantum information, for creating efficient quantum algorithms, and can possibly be detectable in scattering from nanostructures.Comment: 9 pages, 8 postscript figure

The unitary ability of IQ and indexes in WAIS-IV

Lichtenberger and Kaufman (2009, p. 167) defined unitary ability as ‘an ability […] that is represented by a cohesive set of scaled scores, each reflecting slightly different or unique aspects of the ability’. Flanagan and Kaufman (2009) and Lichtenberger and Kaufman (2012) used a difference of 23 IQ points between the highest score (Max) and the lowest score (Min) obtained by a subject in the four Indexes of the WAIS-IV to define unitarity of the total IQ score. A similar method has been used to assess the unitary ability of the four Indexes, with a threshold of 5 points. Such difference scores (of 23 for IQ and 5 for Indexes) are considered high and infrequent and the authors therefore conclude that the corresponding Full-Scale IQ score or Index score is uninterpretable. In this paper we argue that these thresholds are inappropriate because they are based on the wrong standard deviation. The main aim of this study was to establish variability thresholds for IQ and the WAIS-IV Indexes for the American standardization sample and to compare these thresholds with those for the Italian standardization sample. We also consider an alternative approach to determining whether an IQ score represents a unitary ability, based on the maximum difference score for the 10 core subtests that contribute to Full-Scale IQ scores

F-spin as a Partial Symmetry

We use the empirical evidence that F-spin multiplets exist in nuclei for only selected states as an indication that F-spin can be regarded as a partial symmetry. We show that there is a class of non-F-scalar IBM-2 Hamiltonians with partial F-spin symmetry, which reproduce the known systematics of collective bands in nuclei. These Hamiltonians predict that the scissors states have good F-spin and form F-spin multiplets, which is supported by the existing data.Comment: 14 pages, 1 figur

Criticality and Superfluidity in liquid He-4 under Nonequilibrium Conditions

We review a striking array of recent experiments, and their theoretical interpretations, on the superfluid transition in $^4$He in the presence of a heat flux, $Q$. We define and evaluate a new set of critical point exponents. The statics and dynamics of the superfluid-normal interface are discussed, with special attention to the role of gravity. If $Q$ is in the same direction as gravity, a self-organized state can arise, in which the entire sample has a uniform reduced temperature, on either the normal or superfluid side of the transition. Finally, we review recent theory and experiment regarding the heat capacity at constant $Q$. The excitement that surrounds this field arises from the fact that advanced thermometry and the future availability of a microgravity experimental platform aboard the International Space Station will soon open to experimental exploration decades of reduced temperature that were previously inaccessible.Comment: 16 pages, 9 figures, plus harvard.sty style file for references Accepted for publication in Colloquia section of Reviews of Modern Physic

Capacitively Coupled Silicon-Organic Hybrid Modulator for 200 Gbit/s PAM-4 Signaling

We demonstrate capacitively coupled silicon-organic hybrid (SOH) modulator with a π-voltage-length product of 1.3 V mm and 3 dB EO bandwidth exceeding 65 GHz. The modulator is used for 200 Gbit/s (100 GBd) PAM-4 signaling