Genomic Study of RNA Polymerase II and III SNAP(c)-Bound Promoters Reveals a Gene Transcribed by Both Enzymes and a Broad Use of Common Activators.

SNAP(c) is one of a few basal transcription factors used by both RNA polymerase (pol) II and pol III. To define the set of active SNAP(c)-dependent promoters in human cells, we have localized genome-wide four SNAP(c) subunits, GTF2B (TFIIB), BRF2, pol II, and pol III. Among some seventy loci occupied by SNAP(c) and other factors, including pol II snRNA genes, pol III genes with type 3 promoters, and a few un-annotated loci, most are primarily occupied by either pol II and GTF2B, or pol III and BRF2. A notable exception is the RPPH1 gene, which is occupied by significant amounts of both polymerases. We show that the large majority of SNAP(c)-dependent promoters recruit POU2F1 and/or ZNF143 on their enhancer region, and a subset also recruits GABP, a factor newly implicated in SNAP(c)-dependent transcription. These activators associate with pol II and III promoters in G1 slightly before the polymerase, and ZNF143 is required for efficient transcription initiation complex assembly. The results characterize a set of genes with unique properties and establish that polymerase specificity is not absolute in vivo

Intracavity intensity noise suppression in the inverse Compton scattering source BriXSinO exploiting carrier-envelope offset manipulation

We report on a technique that exploits the control of the carrier -envelope offset to suppress the frequency-to-intensity noise conversion in the locking of a mode-locking laser against a high-finesse optical enhancement resonator. A proper combination of the laser carrier-envelope offset and the resonator finesse allows the improvement of the signal-to-noise ratio of the optical intensity trapped into the optical resonator. In this paper, we show the application of this technique in the laser system of the inverse Compton scattering source BriXSinO, currently under development in Milan, Italy, demonstrating the possibility of achieving an intracavity intensity noise reduction of a factor of 20

Carrier-envelope offset frequency measurement by means of an external optical resonator

A general-purpose method based on the implementation of the asymmetric Pound-Drever-Hall (PDH) technique is proposed to measure the carrier-envelope offset (CEO) frequency of a mode-locked laser using an external optical cavity. By analyzing the synchronously demodulated signal of the spectrally filtered cavity reflection when the optical resonator is locked to the mode-locked laser, a discriminating signal depending on the relative frequency offset between the mode-locked and optical cavity comb-like spectra is obtained. For a given geometry and group delay dispersion (GDD) of the cavity parameters (i.e., a known cavity mode offset), this signal can be used to retrieve the laser CEO. This approach turns out to be advantageous in terms of setup complexity with respect to other well-known techniques that rely on non-linear frequency generation, such as f-2f interferometers. In addition, this method can be used to precisely determine the laser-cavity spectral coupling, which is an important topic in cavity-enhanced spectroscopy and non-linear optics applications. After the theoretical description of the generalized asymmetric PDH signal, an experimental validation of the proposed method is reported using an Er-doped fiber frequency comb source centered at 1,550 nm, with a repetition rate of 250 MHz, locked to a linear optical cavity with a 1 GHz free spectral range. The theoretical effect of the GDD is confirmed experimentally using different cavity configurations. Moreover, the comparison with the CEO frequency values measured using an f-2f interferometer demonstrates the feasibility of the proposed method

Incorporating changes in albedo in estimating the climate mitigation benefits of land use change projects

International audienceSome climate scientists are questioning whether the practice of converting of non-forest lands to forest land (afforestation or reforestation) is an effective climate change mitigation option. The discussion focuses particularly on areas where the new forest is primarily coniferous and there is significant amount of snow since the increased climate forcing due to the change in albedo may counteract the decreased climate forcing due to carbon dioxide removal. In this paper, we develop a stand-based model that combines changes in surface albedo, solar radiation, latitude, cloud cover and carbon sequestration. As well, we develop a procedure to convert carbon stock changes to equivalent climatic forcing or climatic forcing to equivalent carbon stock changes. Using the model, we investigate the sensitivity of combined affects of changes in surface albedo and carbon stock changes to model parameters. The model is sensitive to amount of cloud, atmospheric absorption, timing of canopy closure, carbon sequestration rate among other factors. The sensitivity of the model is investigated at one Canadian site, and then the model is tested at numerous sites across Canada. In general, we find that the change in albedo reduces the carbon sequestration benefits by approximately 30% over 100 years, but this is not drastic enough to suggest that one should not use afforestation or reforestation as a climate change mitigation option. This occurs because the forests grow in places where there is significant amount of cloud in winter. As well, variations in sequestration rate seem to be counterbalanced by the amount and timing of canopy closure. We close by speculating that the effects of albedo may also be significant in locations at lower latitudes, where there are less clouds, and where there are extended dry seasons. These conditions make grasses light coloured and when irrigated crops, dark forests or other vegetation such as biofuels replace the grasses, the change in carbon stocks may not compensate for the darkening of the surface

Design and Optimization of a Pneumatic Clamping System for Direct-Driven Rotary Tables

Modern direct-driven and high-speed rotary tables with torque motor are optimally suited for all handling and assembly applications that require the shortest indexing times and flexible positioning. The following paper is devoted to the study, the design, and the optimization of an innovative table clamping system (brake for accurate positioning) actuated by pneumatic energy, working at a maximum clamping pressure of 6 bar. The challenge for the aforementioned application is related to developing a solution able to provide a maximum tangential torque (with clamping actuated) in the range of thousands of Nm without leveraging the use of high-pressure hydraulic energy. The optimization of the proposed solution is based on the precise calculation of the stresses in order to perform a fatigue assessment and on the elastic deformation of the clamps in order to set the correct tolerances between the mating parts. Eventually, an experimental campaign is carried out in order to tune the numerical model, which is then used to validate the proposed design solution

Medicine expenses and obesity in Brazil: an analysis based on the household budget survey

Abstract\ud \ud Background\ud Obesity can be considered a global public health problem that affects virtually all countries worldwide and results in greater use of healthcare services and higher healthcare costs. We aimed to describe average monthly household medicine expenses according to source of funding, public or private, and to estimate the influence of the presence of obese residents in households on total medicine expenses.\ud \ud \ud Methods\ud This study was based on data from the 2008–2009 Brazilian Household Budget Survey, with a representative population sample of 55,970 households as study units. Information on nutritional status and medicines acquired and their cost in the past 30 days were analyzed. A two-part model was employed to assess the influence of obesity on medicine expenses, with monthly household medicine expenses per capita as outcome, presence of obese in the household as explanatory variable, and adjustment for confounding variables.\ud \ud \ud Results\ud Out-of-pocket expenses on medicines were always higher than the cost of medicines obtained through the public sector, and 32 % of households had at least one obese as resident. Monthly household expenses on medicines per capita in households with obese was US$ 20.40, 16 % higher than in households with no obese. An adjusted model confirmed that the presence of obese in the households increased medicine expenses.\ud \ud \ud Conclusion\ud Obesity is associated with additional medicine expenses, increasing the negative impact on household budgets and public expenditure.We are grateful to the the Fundação de Amparo à Pesquisa do Estado de\ud São Paulo (FAPESP) for the research grant (process number 2012/17977-4)\ud and to the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior\ud (CAPES) for the doctoral scholarship to DSC

Marker-Assisted Pyramiding of Blast-Resistance Genes in a japonica Elite Rice Cultivar through Forward and Background Selection

Rice blast, caused by Pyricularia oryzae, is one of the main rice diseases worldwide. The pyramiding of blast-resistance (Pi) genes, coupled to Marker-Assisted BackCrossing (MABC), provides broad-spectrum and potentially durable resistance while limiting the donor genome in the background of an elite cultivar. In this work, MABC coupled to foreground and background selections based on KASP marker assays has been applied to introgress four Pi genes (Piz, Pib, Pita, and Pik) in a renowned japonica Italian rice variety, highly susceptible to blast. Molecular analyses on the backcross (BC) lines highlighted the presence of an additional blast-resistance gene, the Pita-linked Pita2/Ptr gene, therefore increasing the number of blast-resistance introgressed genes to five. The recurrent genome was recovered up to 95.65%. Several lines carrying four (including Pita2) Pi genes with high recovery percentage levels were also obtained. Phenotypic evaluations confirmed the effectiveness of the pyramided lines against multivirulent strains, which also had broad patterns of resistance in comparison to those expected based on the pyramided Pi genes. The developed blast-resistant japonica lines represent useful donors of multiple blast-resistance genes for future rice-breeding programs related to the japonica group

Superconducting RFQs

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Crioconcentración progresiva de soluciones de sacarosa mediante agitación magnética

En este trabajo se estudia el proceso de crioconcentración progresiva mediante agitación magnética. Los resultados muestran que todas las variables analizadas (concentración inicial, temperatura del refrigerante y velocidad de agitación) afectan significativamente al coeficiente de distribución (k), índice de concentración (IC) y eficiencia (eff).Peer ReviewedPostprint (published version