2,117 research outputs found
Modeling and predicting the shape of the far-infrared to submillimeter emission in ultra-compact HII regions and cold clumps
Dust properties are very likely affected by the environment in which dust
grains evolve. For instance, some analyses of cold clumps (7 K- 17 K) indicate
that the aggregation process is favored in dense environments. However,
studying warm (30 K-40 K) dust emission at long wavelength (300
m) has been limited because it is difficult to combine far
infared-to-millimeter (FIR-to-mm) spectral coverage and high angular resolution
for observations of warm dust grains. Using Herschel data from 70 to 500
m, which are part of the Herschel infrared Galactic (Hi-GAL) survey
combined with 1.1 mm data from the Bolocam Galactic Plane Survey (BGPS), we
compared emission in two types of environments: ultra-compact HII (UCHII)
regions, and cold molecular clumps (denoted as cold clumps). With this
comparison we tested dust emission models in the FIR-to-mm domain that
reproduce emission in the diffuse medium, in these two environments (UCHII
regions and cold clumps). We also investigated their ability to predict the
dust emission in our Galaxy. We determined the emission spectra in twelve UCHII
regions and twelve cold clumps, and derived the dust temperature (T) using the
recent two-level system (TLS) model with three sets of parameters and the
so-called T- (temperature-dust emissvity index) phenomenological models,
with  set to 1.5, 2 and 2.5. We tested the applicability of the TLS
model in warm regions for the first time. This analysis indicates distinct
trends in the dust emission between cold and warm environments that are visible
through changes in the dust emissivity index. However, with the use of standard
parameters, the TLS model is able to reproduce the spectral behavior observed
in cold and warm regions, from the change of the dust temperature alone,
whereas a T- model requires  to be known.Comment: Accepted for publication in A&A. 19 pages, 8 figures, 7 table
The mPower Study, Parkinson Disease Mobile Data Collected Using Researchkit
Current measures of health and disease are often insensitive, episodic, and subjective. Further, these measures generally are not designed to provide meaningful feedback to individuals. The impact of high-resolution activity data collected from mobile phones is only beginning to be explored. Here we present data from mPower, a clinical observational study about Parkinson disease conducted purely through an iPhone app interface. The study interrogated aspects of this movement disorder through surveys and frequent sensor-based recordings from participants with and without Parkinson disease. Benefitting from large enrollment and repeated measurements on many individuals, these data may help establish baseline variability of real-world activity measurement collected via mobile phones, and ultimately may lead to quantification of the ebbs-and-flows of Parkinson symptoms. App source code for these data collection modules are available through an open source license for use in studies of other conditions. We hope that releasing data contributed by engaged research participants will seed a new community of analysts working collaboratively on understanding mobile health data to advance human health
Evaluating 5-nitrofurans as trypanocidal agents
The nitroheterocycle nifurtimox, as part of a nifurtimox-eflornithine combination therapy, represents one of a limited number of treatments targeting Trypanosoma brucei, the causative agent of human African trypanosomiasis. The mode of action of this prodrug involves an initial activation reaction catalysed by a type I nitroreductase (NTR), an enzyme found predominantly in prokaryotes, leading to the formation of a cytotoxic unsaturated open chain nitrile metabolite. Here, we evaluate the trypanocidal activity of a library of other 5-nitrofurans against bloodstream form T. brucei as a preliminary step in the identification of additional nitroaromatic compounds that could potentially partner eflornithine. Biochemical screening against purified enzyme revealed that all 5-nitrofurans were effective substrates for TbNTR with the preferred compounds having apparent kcat/KM values approximately 50-fold greater than nifurtimox. For several compounds, in vitro reduction by this nitroreductase yielded products characterized by mass spectroscopy as either unsaturated or saturated open chain nitriles. When tested against bloodstream form T. brucei, many of the derivatives displayed significant growth inhibitory properties with the most potent compounds generating IC50 values around 200 nM. The anti-parasitic activity of the most potent agents was demonstrated to be NTR dependent as parasites having reduced levels of the enzyme displayed resistance to the compounds while parasites over expressing TbNTR showed hypersensitivity. We conclude that other members of the 5-nitrofurans class of nitroheterocycles have potential to treat human African trypanosomiasis perhaps as an alternative partner prodrug to nifurtimox in the next generation of eflornithine-based combinational therapies
Submillimeter to centimeter excess emission from the Magellanic Clouds. II. On the nature of the excess
Dust emission at submm to cm wavelengths is often simply the Rayleigh-Jeans
tail of dust particles at thermal equilibrium and is used as a cold mass tracer
in various environments including nearby galaxies. However, well-sampled
spectral energy distributions of the nearby, star-forming Magellanic Clouds
have a pronounced (sub-)millimeter excess (Israel et al., 2010). This study
attempts to confirm the existence of such a millimeter excess above expected
dust, free-free and synchrotron emission and to explore different possibilities
for its origin. We model NIR to radio spectral energy distributions of the
Magellanic Clouds with dust, free-free and synchrotron emission. A millimeter
excess emission is confirmed above these components and its spectral shape and
intensity are analysed in light of different scenarios: very cold dust, Cosmic
Microwave Background (CMB) fluctuations, a change of the dust spectral index
and spinning dust emission. We show that very cold dust or CMB fluctuations are
very unlikely explanations for the observed excess in these two galaxies. The
excess in the LMC can be satisfactorily explained either by a change of the
spectral index due to intrinsic properties of amorphous grains, or by spinning
dust emission. In the SMC however, due to the importance of the excess, the
dust grain model including TLS/DCD effects cannot reproduce the observed
emission in a simple way. A possible solution was achieved with spinning dust
emission, but many assumptions on the physical state of the interstellar medium
had to be made. Further studies, using higher resolution data from Planck and
Herschel, are needed to probe the origin of this observed submm-cm excess more
definitely. Our study shows that the different possible origins will be best
distinguished where the excess is the highest, as is the case in the SMC.Comment: 7 pages, 6 figures; accepted in A&
The dust properties and physical conditions of the interstellar medium in the LMC massive star forming complex N11
We combine Spitzer and Herschel data of the star-forming region N11 in the
Large Magellanic Cloud to produce detailed maps of the dust properties in the
complex and study their variations with the ISM conditions. We also compare
APEX/LABOCA 870um observations with our model predictions in order to decompose
the 870um emission into dust and non-dust (free-free emission and CO(3-2) line)
contributions. We find that in N11, the 870um can be fully accounted for by
these 3 components. The dust surface density map of N11 is combined with HI and
CO observations to study local variations in the gas-to-dust mass ratios. Our
analysis leads to values lower than those expected from the LMC low-metallicity
as well as to a decrease of the gas-to-dust mass ratio with the dust surface
density. We explore potential hypotheses that could explain the low observed
gas-to-dust mass ratios (variations in the XCO factor, presence of CO-dark gas
or of optically thick HI or variations in the dust abundance in the dense
regions). We finally decompose the local SEDs using a Principal Component
Analysis (i.e. with no a priori assumption on the dust composition in the
complex). Our results lead to a promising decomposition of the local SEDs in
various dust components (hot, warm, cold) coherent with that expected for the
region. Further analysis on a larger sample of galaxies will follow in order to
understand how unique this decomposition is or how it evolves from one
environment to another.Comment: 24 pages, 16 figures, accepted for publication in MNRA
Hierarchical progressive surveys. Multi-resolution HEALPix data structures for astronomical images, catalogues, and 3-dimensional data cubes
Scientific exploitation of the ever increasing volumes of astronomical data
requires efficient and practical methods for data access, visualisation, and
analysis. Hierarchical sky tessellation techniques enable a multi-resolution
approach to organising data on angular scales from the full sky down to the
individual image pixels. Aims. We aim to show that the Hierarchical progressive
survey (HiPS) scheme for describing astronomical images, source catalogues, and
three-dimensional data cubes is a practical solution to managing large volumes
of heterogeneous data and that it enables a new level of scientific
interoperability across large collections of data of these different data
types. Methods. HiPS uses the HEALPix tessellation of the sphere to define a
hierarchical tile and pixel structure to describe and organise astronomical
data. HiPS is designed to conserve the scientific properties of the data
alongside both visualisation considerations and emphasis on the ease of
implementation. We describe the development of HiPS to manage a large number of
diverse image surveys, as well as the extension of hierarchical image systems
to cube and catalogue data. We demonstrate the interoperability of HiPS and
Multi-Order Coverage (MOC) maps and highlight the HiPS mechanism to provide
links to the original data. Results. Hierarchical progressive surveys have been
generated by various data centres and groups for ~200 data collections
including many wide area sky surveys, and archives of pointed observations.
These can be accessed and visualised in Aladin, Aladin Lite, and other
applications. HiPS provides a basis for further innovations in the use of
hierarchical data structures to facilitate the description and statistical
analysis of large astronomical data sets.Comment: 21 pages, 6 figures. Accepted for publication in Astronomy &
  Astrophysic
Fracture of a biopolymer gel as a viscoplastic disentanglement process
We present an extensive experimental study of mode-I, steady, slow crack
dynamics in gelatin gels. Taking advantage of the sensitivity of the elastic
stiffness to gel composition and history we confirm and extend the model for
fracture of physical hydrogels which we proposed in a previous paper (Nature
Materials, doi:10.1038/nmat1666 (2006)), which attributes decohesion to the
viscoplastic pull-out of the network-constituting chains. So, we propose that,
in contrast with chemically cross-linked ones, reversible gels fracture without
chain scission
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