291 research outputs found
"Песня караульного у тюрмы" Тараса Шевченка та її прототексти
This paper briefly illustrates a method to represent national energy systems and the geographical details of CCS infrastructures in the same technical-economic model. In the MARKAL-TIMES modeling framework a model of Morocco, Portugal and Spain with both spatial and temporal details has been implemented. As a function of assumptions on the development to 2050 of mitigation levels, economic growth and CO2 capture-transport storage characteristics, dozens of scenarios were prepared with the TIMES-COMET model. A few results on optimal levels of CCS contribution to mitigation compared to other energy system options are presented. The results also indicate the least cost lay out of the main capture, transport and storage infrastructures. It is concluded that the availability of CCS after 2020 will reduce the cost of mitigation in the Iberian Peninsula as soon as the EU GHG emissions reduction targets become more stringent than decided so far
Whole Genome Analysis of Gene Expression Reveals Coordinated Activation of Signaling and Metabolic Pathways during Pollen-Pistil Interactions in Arabidopsis
Plant reproduction depends on the concerted activation of many genes to ensure correct communication between pollen and pistil. Here, we queried the whole transcriptome of Arabidopsis (Arabidopsis thaliana) in order to identify genes with specific reproductive functions. We used the Affymetrix ATH1 whole genome array to profile wild-type unpollinated pistils and unfertilized ovules. By comparing the expression profile of pistils at 0.5, 3.5, and 8.0 h after pollination and applying a number of statistical and bioinformatics criteria, we found 1,373 genes differentially regulated during pollen-pistil interactions. Robust clustering analysis grouped these genes in 16 time-course clusters representing distinct patterns of regulation. Coregulation within each cluster suggests the presence of distinct genetic pathways, which might be under the control of specific transcriptional regulators. A total of 78% of the regulated genes were expressed initially in unpollinated pistil and/or ovules, 15% were initially detected in the pollen data sets as enriched or preferentially expressed, and 7% were induced upon pollination. Among those, we found a particular enrichment for unknown transcripts predicted to encode secreted proteins or representing signaling and cell wall-related proteins, which may function by remodeling the extracellular matrix or as extracellular signaling molecules. A strict regulatory control in various metabolic pathways suggests that fine-tuning of the biochemical and physiological cellular environment is crucial for reproductive success. Our study provides a unique and detailed temporal and spatial gene expression profile of in vivo pollen-pistil interactions, providing a framework to better understand the basis of the molecular mechanisms operating during the reproductive process in higher plants.Fundação para a Ciência e a Tecnologia grants: (FCT–PTDC/QUI/64339/06, SFRH/BD/1128/2000)
Arabidopsis Tetraspanins Are Confined to Discrete Expression Domains and Cell Types in Reproductive Tissues and Form Homo- and Heterodimers When Expressed in Yeast
Tetraspanins are evolutionary conserved transmembrane proteins present in all multicellular organisms. In animals, they are known to act as central organizers of membrane complexes and thought to facilitate diverse biological processes, such as cell proliferation, movement, adhesion, and fusion. The genome of Arabidopsis (Arabidopsis thaliana) encodes 17 members of the tetraspanin family; however, little is known about their functions in plant development. Here, we analyzed their phylogeny, protein topology, and domain structure and surveyed their expression and localization patterns in reproductive tissues. We show that, despite their low sequence identity with metazoan tetraspanins, plant tetraspanins display the typical structural topology and most signature features of tetraspanins in other multicellular organisms. Arabidopsis tetraspanins are expressed in diverse tissue domains or cell types in reproductive tissues, and some accumulate at the highest levels in response to pollination in the transmitting tract and stigma, male and female gametophytes and gametes. Arabidopsis tetraspanins are preferentially targeted to the plasma membrane, and they variously associate with specialized membrane domains, in a polarized fashion, to intercellular contacts or plasmodesmata. A membrane-based yeast (Saccharomyces cerevisiae) two-hybrid system established that tetraspanins can physically interact, forming homo- and heterodimer complexes. These results, together with a likely genetic redundancy, suggest that, similar to their metazoan counterparts, plant tetraspanins might be involved in facilitating intercellular communication, whose functions might be determined by the composition of tetraspanin complexes and their binding partners at the cell surface of specific cell types.Marie Curie International Reintegration grant: (no. IRG–256602), U.S. Department of Agriculture-Agricultural Research Service Current Research Information System grant: (5335–21000–030–00D), Fundação
Ciência e Tecnologia Postdoctoral Fellowship: (SFRH/BPD/43584/2008), China Scholarship Council fellowship, UC-Berkeley College of Natural Resources SPUR
FACS-based purification of Arabidopsis microspores, sperm cells and vegetative nuclei
Background:
The male germline in flowering plants differentiates by asymmetric division of haploid uninucleated
microspores, giving rise to a vegetative cell enclosing a smaller generative cell, which eventually undergoes a
second mitosis to originate two sperm cells. The vegetative cell and the sperm cells activate distinct genetic and epigenetic mechanisms to control pollen tube growth and germ cell specification, respectively. Therefore, a comprehensive characterization of these processes relies on efficient methods to isolate each of the different cell types throughout male gametogenesis.
Results:
We developed stable transgenic Arabidopsis lines and reliable purification tools based on
Fluorescence-Activated Cell Sorting (FACS) in order to isolate highly pure and viable fractions of each cell/nuclei type before and after pollen mitosis. In the case of mature pollen, this was accomplished by expressing GFP and RFP in the sperm and vegetative nuclei, respectively, resulting in 99% pure sorted populations. Microspores were also purified by FACS taking advantage of their characteristic small size and autofluorescent properties, and were confirmed to be 98% pure.
Conclusions:
We provide simple and efficient FACS-based purification protocols for Arabidopsis microspores, vegetative nuclei and sperm cells. This paves the way for subsequent molecular analysis such as transcriptomics, DNA methylation analysis and chromatin immunoprecipitation, in the developmental context of microgametogenesis in Arabidopsis.NSERC graduate student fellowship; Fred C. Gloeckner Foundation grant
FACS-based purification of Arabidopsis microspores, sperm cells and vegetative nuclei
ABSTRACT: BACKGROUND: The male germline in flowering plants differentiates by asymmetric division of haploid uninucleated microspores, giving rise to a vegetative cell enclosing a smaller generative cell, which eventually undergoes a second mitosis to originate two sperm cells. The vegetative cell and the sperm cells activate distinct genetic and epigenetic mechanisms to control pollen tube growth and germ cell specification, respectively. Therefore, a comprehensive characterization of these processes relies on efficient methods to isolate each of the different cell types throughout male gametogenesis. RESULTS: We developed stable transgenic Arabidopsis lines and reliable purification tools based on Fluorescence-Activated Cell Sorting (FACS) in order to isolate highly pure and viable fractions of each cell/nuclei type before and after pollen mitosis. In the case of mature pollen, this was accomplished by expressing GFP and RFP in the sperm and vegetative nuclei, respectively, resulting in 99% pure sorted populations. Microspores were also purified by FACS taking advantage of their characteristic small size and autofluorescent properties, and were confirmed to be 98% pure. CONCLUSIONS: We provide simple and efficient FACS-based purification protocols for Arabidopsis microspores, vegetative nuclei and sperm cells. This paves the way for subsequent molecular analysis such as transcriptomics, DNA methylation analysis and chromatin immunoprecipitation, in the developmental context of microgametogenesis in Arabidopsis
Intercellular communication inArabidopsis thalianapollen discovered viaAHG3transcript movement from the vegetative cell to sperm
An Arabidopsis pollen grain (male gametophyte) consists of three cells: the vegetative cell, which forms the pollen tube, and two sperm cells enclosed within the vegetative cell. It is still unclear if there is intercellular communication between the vegetative cell and the sperm cells. Here we show that ABA-hypersensitive germination3 (AHG3), encoding a protein phosphatase, is specifically transcribed in the vegetative cell but predominantly translated in sperm cells. We used a series of deletion constructs and promoter exchanges to document transport of AHG3 transcripts from the vegetative cell to sperm and showed that their transport requires sequences in both the 5' UTR and the coding region. Thus, in addition its known role in transporting sperm during pollen tube growth, the vegetative cell also contributes transcripts to the sperm cells.US Department of Agriculture-Agricultural Research Service Current Research Information System Grant: (5335–21000–030–00D), European Research Council Starting Independent Researcher grant
Co-firing of biomass and other wastes in fluidised bed systems
A project on co-firing in large-scale power plants burning coal is currently funded by the European Commission. It is called COPOWER. The project involves 10 organisations from 6 countries. The project involves combustion studies over the full spectrum of equipment size, ranging from small laboratory-scale reactors and pilot plants, to investigate fundamentals and operating parameters, to proving trials on a commercial power plant in Duisburg. The power plant
uses a circulating fluidized bed boiler. The results to be obtained are to be compared as function of scale-up. There are two different coals, 3 types of biomass and 2 kinds of waste materials are to be used for blending with coal for co-firing tests. The baseline values are obtained during a campaign of one month at the power station and the results are used for comparison with those to be obtained in other units of various sizes. Future tests will be implemented with the objective to achieve improvement on baseline values. The fuels to be used are already characterized. There are ongoing studies to determine reactivities of fuels and chars produced from the fuels. Reactivities are determined not only for individual fuels but also for blends to be used. Presently pilot-scale combustion tests are also undertaken to study the effect of blending coal with different types of biomass and waste materials. The potential for synergy to improve combustion is investigated. Early results will be reported in the Conference. Simultaneously, studies to verify the availability of biomass and waste materials in Portugal, Turkey and Italy have been undertaken. Techno-economic barriers for the future use of biomass and other waste materials are identified. The potential of using these materials in coal fired power stations has been assessed. The conclusions will also be reported
Plant Evolution: What Does It Take To Be an Egg?
The genetic regulation of cell patterning within plant gametophytes remains poorly understood. Now, two new studies in the liverwort Marchantia polymorpha shed light on the conserved function of an RKD transcription factor as a key regulator of egg cell fate in the land plant lineage.Não estão presentes ou indicados os patrocinadores ou financiadores da publicação
Seasonal water level fluctuations: Implications for reservoir limnology and management
With the purpose of finding out whether seasonal water level fluctuations could affect water quality in a reservoir subjected
to those changes, trends in environmental variables and in phytoplankton and zooplankton assemblages were analysed. The
reservoir’s hydrological cycle was characterized by three regimes. The maximum level phase lasted from January to the
beginning of June, the emptying phase existed between mid-June to the beginning of September and the minimum level
phase lasted from mid-September to the beginning of the first autumn/winter rain events. The highest values of total
phosphorus, soluble reactive phosphorus, nitrate, water colour and chlorophyll a were found during the minimum level
phase. The phytoplankton assemblage was dominated by taxa typical of meso-eutrophic environments during the emptying
and minimum level phases. However, during the maximum level phase, taxa generally found in more oligotrophic systems
were observed here also. Similar to other disturbed systems, the zooplankton assemblage was dominated by Rotifera,
except in summer and autumn when the cladoceran Ceriodaphnia quadrangula and/or the copepod Tropocyclops prasinus
became dominant. Although those shifts seem to be related to water level variations, further research is needed to evaluate
to what extent they might also be induced by other seasonal factors acting independently of water fluctuations. Based upon
the obtained data, suggestions for reservoir management are proposed
Classifying spaces of infinity-sheaves
We prove that the set of concordance classes of sections of an infinity-sheaf on a manifold is representable, extending a theorem of Madsen and Weiss. This is reminiscent of an h-principle in which the role of isotopy is played by concordance. As an application, we offer an answer to the question: what does the classifying space of a Segal space classify
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