Finite automata for caching in matrix product algorithms

A diagram is introduced for visualizing matrix product states which makes transparent a connection between matrix product factorizations of states and operators, and complex weighted finite state automata. It is then shown how one can proceed in the opposite direction: writing an automaton that ``generates'' an operator gives one an immediate matrix product factorization of it. Matrix product factorizations have the advantage of reducing the cost of computing expectation values by facilitating caching of intermediate calculations. Thus our connection to complex weighted finite state automata yields insight into what allows for efficient caching in matrix product algorithms. Finally, these techniques are generalized to the case of multiple dimensions.Comment: 18 pages, 19 figures, LaTeX; numerous improvements have been made to the manuscript in response to referee feedbac

Studies on the synthesis of cyclohexynes for inter- and intramolecular cycloaddition reactions

Thesis (S.M.)--Massachusetts Institute of Technology, Dept. of Chemistry, February 2010."February 2010." Cataloged from PDF version of thesis.Includes bibliographical references.Strained cycloalkynes have been of interest to organic chemists for many years due to their exotic structure and their potential utility as synthetic building blocks. This thesis examines the generation of cyclohexyne derivatives and their reactivity in inter- and intramolecular cycloadditions. Several strategies were investigated to generate substrates for the intramolecular trapping of the cyclohexynes. In addition, simple cyclohexyne derivatives were prepared and two cases of intermolecular trapping are reported.by Cynthia K. Crosswhite.S.M

Effects of prosodically modulated sub-phonetic variation on lexical competition

Eye movements were monitored as participants followed spoken instructions to manipulate one of four objects pictured on a computer screen. Target words occurred in utterance-medial (e.g., Put the cap next to the square) or utterance-final position (e.g., Now click on the cap). Displays consisted of the target picture (e.g., a cap), a monosyllabic competitor picture (e.g., a cat), a polysyllabic competitor picture (e.g., a captain) and a distractor (e.g., a beaker). The relative proportion of fixations to the two types of competitor pictures changed as a function of the position of the target word in the utterance, demonstrating that lexical competition is modulated by prosodically conditioned phonetic variation

Protective effects of hydrogen-rich saline on monocrotaline-induced pulmonary hypertension in a rat model

<p>Abstract</p> <p>Background</p> <p>Hydrogen-rich saline has been reported to have antioxidant and anti-inflammatory effects and effectively protect against organ damage. Oxidative stress and inflammation contribute to the pathogenesis and/or development of pulmonary hypertension. In this study, we investigated the effects of hydrogen-rich saline on the prevention of pulmonary hypertension induced by monocrotaline in a rat model.</p> <p>Methods</p> <p>In male Sprague-Dawley rats, pulmonary hypertension was induced by subcutaneous administration of monocrotaline at a concentration of 6 mg/100 g body weight. Hydrogen-rich saline (5 ml/kg) or saline was administred intraperitoneally once daily for 2 or 3 weeks. Severity of pulmonary hypertension was assessed by hemodynamic index and histologic analysis. Malondialdehyde and 8-hydroxy-desoxyguanosine level, and superoxide dismutase activity were measured in the lung tissue and serum. Levels of pro-inflammatory cytokines (tumor necrosis factor-α, interleukin-6) in serum were determined with enzyme-linked immunosorbent assay.</p> <p>Results</p> <p>Hydrogen-rich saline treatment improved hemodynamics and reversed right ventricular hypertrophy. It also decreased malondialdehyde and 8-hydroxy-desoxyguanosine levels, and increased superoxide dismutase activity in the lung tissue and serum, accompanied by a decrease in pro-inflammatory cytokines.</p> <p>Conclusions</p> <p>These results suggest that hydrogen-rich saline ameliorates the progression of pulmonary hypertension induced by monocrotaline in rats, which may be associated with its antioxidant and anti-inflammatory effects.</p

Gonadotropin-releasing hormone increased pregnancy risk in suckled beef cows not detected in estrus and subjected to a split-time artificial insemination program

Citation: Hill, S. L., Grieger, D. M., Olson, K. C., Jaeger, J. R., Dahlen, C. R., Crosswhite, M. R., . . . Stevenson, J. S. (2016). Gonadotropin-releasing hormone increased pregnancy risk in suckled beef cows not detected in estrus and subjected to a split-time artificial insemination program. Journal of Animal Science, 94(9), 3722-3728. doi:10.2527/jas2016-0582We hypothesized that GnRH would increase pregnancy risk (PR) in a split-time AI program for cows in which estrus was not detected. A total of 1,236 suckled beef cows at 12 locations in 3 states (Colorado, Kansas, and North Dakota) were enrolled. Before applying the fixed-time AI program, BCS was assessed. Cows were treated on d -7 with a progesterone insert concurrent with 100 mu g GnRH and on d 0 with 25 mg PGF(2 alpha) plus removal of the insert. Estrus-detection patches were affixed to cows at insert removal. Estrus was defined to have occurred when an estrus-detection patch was >50% colored (activated). Cows in estrus by 65 h (n = 758; 61.3% of all cows) were randomly allocated to 2 treatments: 1) 100 mu g GnRH and early + GnRH (E+G; n = 373) or 2) AI only at 65 h (early -no GnRH [E-G]; n = 385). The remaining cows were randomly allocated to 2 treatments: 1) 5(L+G; n = 252) or 2) AI only at 84 h (late no GnRH [L-G]; n = 226). Pregnancy was determined 35 d after AI via transrectal ultrasound. Pregnancy risk did not differ (P = 0.68) between E+G and E-G cows (61.9 vs. 60.4%, respectively). Conversely, for cows inseminated at 84 h, PR was greater (P = 0.01) in cows that received GnRH (L+G) compared with their herd mates not receiving GnRH (L-G; 41.7 vs. 30.8%, respectively). Of those cows not detected in estrus by 65 h, 42.1% were detected by 84 h, for a total expression of estrus by all cows of 77.6%. Administration of GnRH increased (P < 0.01) PR in cows not detected in estrus by 84 h (+ GnRH = 33.4% [n = 146] vs. no GnRH = 15.0% [n = 128]) but had no effect in cows expressing estrus by 84 h (+ GnRH = 65.3% [n = 103] vs. no GnRH = 61.7% [n = 97]). Neither estrus expression by 65 or 84 h nor PR was influenced by BCS, parity, or days postpartum at AI. Cows had greater PR when they had been detected in estrus before AI, and PR was improved by administration of GnRH at 65 h after insert removal in cows that were not detected in estrus and inseminated at 84 h

Entanglement Perturbation Theory for Antiferromagnetic Heisenberg Spin Chains

A recently developed numerical method, entanglement perturbation theory (EPT), is used to study the antiferromagnetic Heisenberg spin chains with z-axis anisotropy $\lambda$ and magnetic field B. To demonstrate the accuracy, we first apply EPT to the isotropic spin-1/2 antiferromagnetic Heisenberg model, and find that EPT successfully reproduces the exact Bethe Ansatz results for the ground state energy, the local magnetization, and the spin correlation functions (Bethe ansatz result is available for the first 7 lattice separations). In particular, EPT confirms for the first time the asymptotic behavior of the spin correlation functions predicted by the conformal field theory, which realizes only for lattice separations larger than 1000. Next, turning on the z-axis anisotropy and the magnetic field, the 2-spin and 4-spin correlation functions are calculated, and the results are compared with those obtained by Bosonization and density matrix renormalization group methods. Finally, for the spin-1 antiferromagnetic Heisenberg model, the ground state phase diagram in $\lambda$ space is determined with help of the Roomany-Wyld RG finite-size-scaling. The results are in good agreement with those obtained by the level-spectroscopy method.Comment: 12 pages, 14 figure

Gonadotropin-Releasing Hormone Increased Pregnancy in Suckled Beef Cows Not Detected in Estrus and Subjected to a Split-Time Artificial Insemination Program

Estrus-synchronization programs allow insemination of all females in a herd at one fixed time on the first day of the breeding season. Inseminating cows after they have expressed estrus increases pregnancy rate (PR) compared with cows that do not display estrus in a timed AI (TAI) program. Identification of estrus status can be facilitated by using estrus-detection patches. Varying AI timing according to estrus status has increased PR in some previous studies. Reducing the number of injections in a TAI program decreases labor requirements, stress on cows, and overall cost of the program. Previous studies have demonstrated that PR is not compromised in cows displaying estrus when the GnRH injection administered at AI is eliminated. A split-time AI program decreases the time between estrus expression and insemination compared with a single fixed-time AI when the first AI occurs before the recommended standard 60- to 66-h fixed time. Previous research has demonstrated that delaying AI results in approxi­mately 50% more cows displaying estrus when compared with a single insemination time. Eliminating the GnRH injection at AI for cows displaying estrus in a split TAI program can reduce the number of GnRH injections required and the program cost. The objective of this study was to test the hypothesis that GnRH injection concurrent with split TAI program improves PR only in cows not displaying estrus

Chronic Allergic Inflammation Causes Vascular Remodeling and Pulmonary Hypertension in Bmpr2 Hypomorph and Wild-Type Mice

Loss-of-function mutations in the bone morphogenetic protein receptor type 2 (BMPR2) gene have been identified in patients with heritable pulmonary arterial hypertension (PAH); however, disease penetrance is low, suggesting additional factors play a role. Inflammation is associated with PAH and vascular remodeling, but whether allergic inflammation triggers vascular remodeling in individuals with BMPR2 mutations is unknown. Our goal was to determine if chronic allergic inflammation would induce more severe vascular remodeling and PAH in mice with reduced BMPR-II signaling. Groups of Bmpr2 hypomorph and wild-type (WT) Balb/c/Byj mice were exposed to house dust mite (HDM) allergen, intranasally for 7 or 20 weeks to generate a model of chronic inflammation. HDM exposure induced similar inflammatory cell counts in all groups compared to controls. Muscularization of pulmonary arterioles and arterial wall thickness were increased after 7 weeks HDM, more severe at 20 weeks, but similar in both groups. Right ventricular systolic pressure (RVSP) was measured by direct cardiac catheterization to assess PAH. RVSP was similarly increased in both HDM exposed groups after 20 weeks compared to controls, but not after 7 weeks. Airway hyperreactivity (AHR) to methacholine was also assessed and interestingly, at 20 weeks, was more severe in HDM exposed Bmpr2 hypomorph mice versus WT. We conclude that chronic allergic inflammation caused PAH and while the severity was mild and similar between WT and Bmpr2 hypomorph mice, AHR was enhanced with reduced BMPR-II signaling. These data suggest that vascular remodeling and PAH resulting from chronic allergic inflammation occurs independently of BMPR-II pathway alterations