610 research outputs found

    A Meiotic Tapas Menu

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    this past fall (September 13-18), the 7th European Meiosis Meeting held in San Lorenzo de El Escorial brought us'Meiosis in Madrid.''This is a sister conference to the Gordon Meiosis series held every other year in the United States, and is an international small-format forum for sharing hot, new results, with an emphasis on unpublished work. At the conference, 21 countries were represented by 167 participants, with a nearly equal split between male and female scientists. The aim of the meeting was to present and promote in-depth discussions about all aspects of meiotic chromosome dynamics, recombination, and segregation. Rather than providing a comprehensive description of the meeting abstracts, this report will briefly describe meeting highlights, guided in large part by feedback from session chairs

    Infiltration and short-term movement of nitrogen in a silt-loam soil typical of rice cultivation in Arkansas

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    Rice production in Arkansas is one of the top three crop commodities in terms of cash receipts. Researchers and farmers report that nitrogen (N) needs to be managed according to a variety of factors with two important ones being soil and fertilizer type. The objectives of this experiment were to determine: 1) the degree to which floodwater-incorporated N applied as urea or as ammonium sulfate infiltrates intact cores (7.2-cm dia., 10-cm depth) containing DeWitt siltloam soil, and 2) the distribution of N during 12 h of ponding. Inorganic-N concentrations were analyzed at 2-cm depth intervals in cores following removal of the flood. Nitrogen from applied fertilizer was recovered as ammonium. Ammonium sulfate-N remained in the top 4 cm of soil with concentrations of 375 µg N g-1 in the surface 2 cm and 300 µg N g-1 at the 2 - 4 cm depth after 12 hr of ponding. At all depth intervals below 4 cm, ammonium sulfate-N remained below 30 µg N g-1. In contrast, after 12 h of ponding, N in soil receiving urea was 105 µg N g-1 in the top 2 cm and 173 µg N g-1 at 2-4 cm. At 4-6, 6-8, and 8-10 cm, N was 109, 108, and 35 µg N g-1, respectively, after 12 h of ponding. These results demonstrate immediate and deeper movement of ammonium into silt loam soil receiving urea as compared to ammonium sulfate, demonstrating how the form of N in fertilizer affects its movement into the soil profile

    Size Dependence in Non-sperm Ejaculate Production is Reflected in Daily Energy Expenditure and Resting Metabolic Rate

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    The non-sperm components of an ejaculate, such as copulatory plugs, can be essential to male reproductive success. But the costs of these ejaculate components are often considered trivial. In polyandrous species, males are predicted to increase energy allocation to the production of non-sperm components, but this allocation is often condition dependent and the energetic costs of their production have never been quantified. Red-sided garter snakes (Thamnophis sirtalis parietalis) are an excellent model with which to quantify the energetic costs of non-sperm components of the ejaculate as they exhibit a dissociated reproductive pattern in which sperm production is temporally disjunct from copulatory plug production, mating and plug deposition. We estimated the daily energy expenditure and resting metabolic rate of males after courtship and mating, and used bomb calorimetry to estimate the energy content of copulatory plugs. We found that both daily energy expenditure and resting metabolic rate were significantly higher in small mating males than in courting males, and a single copulatory plug without sperm constitutes 5–18% of daily energy expenditure. To our knowledge, this is the first study to quantify the energetic expense of size-dependent ejaculate strategies in any species

    Consent and Internet-Enabled Human Genomics

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    This month, PLoS Genetics is publishing an article from the company 23andMe reporting the first genome-wide association studies (GWAS) on multiple traits ascertained by self-reported information provided through the Internet from over 10,000 participants who pay the company for providing whole genome genotypes. The paper passed through scientific review by a panel of three experts relatively quickly and is sure to attract the attention of anyone with freckles, curly hair, or an aversion to asparagus. Novel associations are described for four intrinsically interesting traits (out of 22 considered), while known associations with hair and eye color are replicated in a dynamic data-gathering context. Additionally, intriguing observations on the interaction between genetic self-knowledge and self-report of phenotypes are described. The implications of the successful application of this Internet-enabled approach to GWAS research were considered to be more than sufficient to warrant publication in the journal

    Juxtaposition of heterozygous and homozygous regions causes reciprocal crossover remodelling via interference during Arabidopsis meiosis

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    During meiosis homologous chromosomes undergo crossover recombination. Sequence differences between homologs can locally inhibit crossovers. Despite this, nucleotide diversity and population-scaled recombination are positively correlated in eukaryote genomes. To investigate interactions between heterozygosity and recombination we crossed Arabidopsis lines carrying fluorescent crossover reporters to 32 diverse accessions and observed hybrids with significantly higher and lower crossovers than homozygotes. Using recombinant populations derived from these crosses we observed that heterozygous regions increase crossovers when juxtaposed with homozygous regions, which reciprocally decrease. Total crossovers measured by chiasmata were unchanged when heterozygosity was varied, consistent with homeostatic control. We tested the effects of heterozygosity in mutants where the balance of interfering and non-interfering crossover repair is altered. Crossover remodeling at homozygosity-heterozygosity junctions requires interference, and non-interfering repair is inefficient in heterozygous regions. As a consequence, heterozygous regions show stronger crossover interference. Our findings reveal how varying homolog polymorphism patterns can shape meiotic recombination.DOI: http://dx.doi.org/10.7554/eLife.03708.001eLife digestThe genomes of plants and animals consist of several long DNA molecules that are called chromosomes. Most organisms carry two copies of each chromosome: one inherited from each parent. This means that an individual has two copies of each gene. Some of these gene copies may be identical (known as ‘homozygous’), but other gene copies will have sequence differences (or be ‘heterozygous’).The sex cells (eggs and sperm) that pass half of each parent's genes on to its offspring are made in a process called meiosis. Before the pairs of each chromosome are separated to make two new sex cells, sections of genetic material can be swapped between a chromosome-pair to produce chromosomes with unique combinations of genetic material.The ‘crossover’ events that cause the genetic material to be swapped are less likely to happen in sections of chromosomes that contain heterozygous genes. However, in a whole population of organisms, the exchange of genetic material between pairs of chromosomes tends to be higher when there are more genetic differences present.Here, Ziolkowski et al. sought to understand these two seemingly contradictory phenomena by studying crossover events during meiosis in a plant known as Arabidopsis. The plants were genetically modified to carry fluorescent proteins that mark when and where crossovers occur. Ziolkowski et al. cross-bred these plants with 32 other varieties of Arabidopsis. The experiments show that some of these ‘hybrid’ plants had higher numbers of crossover events than plants produced from two genetically identical parents, but other hybrid plants had lower numbers of crossovers.Ziolkowski et al. found that crossovers are more common between heterozygous regions that are close to homozygous regions on the same chromosome. The boundaries between these identical and non-identical regions are important for determining where crossovers take place. The experiments also show that the heterozygous regions have higher levels of interference—where one crossover event prevents other crossover events from happening nearby on the chromosome. In future, using chromosomes with varying patterns of heterozygosity may shed light on how this interference works.DOI: http://dx.doi.org/10.7554/eLife.03708.00

    Probabilistic prediction of cutting and ploughing forces using extended kienzle force model in orthogonal turning process

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    Probabilistic prediction of cutting and ploughing forces is performed by applying Bayesian inference to an extended Kienzle force model. Prior probabilities are established and posterior force predictions are completed. The results of the probabilistic force predictions are then verified using forces measured under other cutting conditions, as well as a simplified slip-line force model. Additionally, probabilistic simulation results are compared with the results of a non-linear least squares fitting technique to isolate the shearing and ploughing force components of the cutting force

    Meiotic Transmission of an In Vitro–Assembled Autonomous Maize Minichromosome

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    Autonomous chromosomes are generated in yeast (yeast artificial chromosomes) and human fibrosarcoma cells (human artificial chromosomes) by introducing purified DNA fragments that nucleate a kinetochore, replicate, and segregate to daughter cells. These autonomous minichromosomes are convenient for manipulating and delivering DNA segments containing multiple genes. In contrast, commercial production of transgenic crops relies on methods that integrate one or a few genes into host chromosomes; extensive screening to identify insertions with the desired expression level, copy number, structure, and genomic location; and long breeding programs to produce varieties that carry multiple transgenes. As a step toward improving transgenic crop production, we report the development of autonomous maize minichromosomes (MMCs). We constructed circular MMCs by combining DsRed and nptII marker genes with 7–190 kb of genomic maize DNA fragments containing satellites, retroelements, and/or other repeats commonly found in centromeres and using particle bombardment to deliver these constructs into embryogenic maize tissue. We selected transformed cells, regenerated plants, and propagated their progeny for multiple generations in the absence of selection. Fluorescent in situ hybridization and segregation analysis demonstrated that autonomous MMCs can be mitotically and meiotically maintained. The MMC described here showed meiotic segregation ratios approaching Mendelian inheritance: 93% transmission as a disome (100% expected), 39% transmission as a monosome crossed to wild type (50% expected), and 59% transmission in self crosses (75% expected). The fluorescent DsRed reporter gene on the MMC was expressed through four generations, and Southern blot analysis indicated the encoded genes were intact. This novel approach for plant transformation can facilitate crop biotechnology by (i) combining several trait genes on a single DNA fragment, (ii) arranging genes in a defined sequence context for more consistent gene expression, and (iii) providing an independent linkage group that can be rapidly introgressed into various germplasms

    Outcomes and Experiences of an RN to BSN Online Cohort: An Academic-Practice Partnership

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    Abstract This article describes the result of an academic-practice partnership between a School of Nursing (SON) and a University Medical Center (UMC) for the purpose of promoting BSN education in response to the Institute of Medicine’s recommendation that 80% of RNs hold a baccalaureate degree or higher by 2020. The mutually beneficial partnership worked together to offer a pilot online RN-BSN nursing program, increase the number of BSNs in the workforce, and to collect information from RN-BSN students returning to school about their challenges, recommendations for future programs, and why they were interested in returning to school. The BSN graduates reported a renewed interest in nursing, opportunities for advancement, and the importance of a support system for RNs planning to return to school. The BSN graduates identified barriers for returning to school included finances, lack of knowledge related to technology, and challenges of maintaining work-life balance

    Energy supply of countryside based on geothermal deposit

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    Meiosis is a specialized eukaryotic cell division that generates haploid gametes required for sexual reproduction. During meiosis, homologous chromosomes pair and undergo reciprocal genetic exchange, termed crossover (CO). Meiotic CO frequency varies along the physical length of chromosomes and is determined by hierarchical mechanisms, including epigenetic organization, for example methylation of the DNA and histones. Here we investigate the role of DNA methylation in determining patterns of CO frequency along Arabidopsis thaliana chromosomes. In A. thaliana the pericentromeric regions are repetitive, densely DNA methylated, and suppressed for both RNA polymerase-II transcription and CO frequency. DNA hypomethylated methyltransferase1 (met1) mutants show transcriptional reactivation of repetitive sequences in the pericentromeres, which we demonstrate is coupled to extensive remodeling of CO frequency. We observe elevated centromere-proximal COs in met1, coincident with pericentromeric decreases and distal increases. Importantly, total numbers of CO events are similar between wild type and met1, suggesting a role for interference and homeostasis in CO remodeling. To understand recombination distributions at a finer scale we generated CO frequency maps close to the telomere of chromosome 3 in wild type and demonstrate an elevated recombination topology in met1. Using a pollen-typing strategy we have identified an intergenic nucleosome-free CO hotspot 3a, and we demonstrate that it undergoes increased recombination activity in met1. We hypothesize that modulation of 3a activity is caused by CO remodeling driven by elevated centromeric COs. These data demonstrate how regional epigenetic organization can pattern recombination frequency along eukaryotic chromosomes
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