Use of molecular markers and major genes in the genetic improvement of livestock

Recent developments in molecular biology and statistics have opened the possibility of identifying and using genomic variation and major genes for the genetic improvement of livestock. Information concerning the basis of these techniques and their applications to the genetic improvement of animals is reviewed. Main marker molecular marker systems in animals (RFPL and microsatellites), genome maps, methods for detecting marker major gene linkages and use of marker assisted selection, genetic fingerprinting and mixture models based on segregation analysis are analyzed. The characteristics where the application of marker assisted selection can be more effective are those that are expressed late in the life of the animal, or controlled by a few pairs of genes. The first example correspond to the longevity and carcass characteristics in meat producing animals, the second, to the resistance to certain diseases or defects of simple inheritance. The detection of major genes using mixture models with segregation analysis can direct the work of identification of DNA marker genotypes towards populations and characteristics with greater probability of detecting a major gene using molecular markers. The present trend indicates that molecular, pedigree and phenotypic information will be integrated in the future through mixture models of segregation analysis that might contain major gene effects through the markers, polygenic inheritance and uses powerful and flexible methods of estimation such as Gibbs Sampling

Effect of climate and insemination technique on reproductive performance of gilts and sows in a subtropical zone of Mexico

The objective of this study was to analyse the reproductive performance of hybrid (Yorkshire x Landrace) gilts/sows in relation to temperature-humidity index (THI) at artificial insemination (AI), season of AI, occurrence of estrus >8 d post-weaning, repeated estrus, insemination technique (cervical, CAI or post-cervical, PCAI) and parity. Data included 8851 reproductive records (1771 for gilts and 7080 for sows) from a pig farm in a sub-tropical zone (THI ranged from 72.9 in January to 81.8 in June). A decrease in pregnancy rate (PR, 89.8 vs 93.0%; P<0.01) and a tendency to decline farrowing rate (FR, 87.9 vs 90.3%; P=0.07) following AI during high THI (>82), compared to AI at <74 THI were observed. The spring and summer season were associated with decreased (P<0.01) PR compared with fall and winter (90.0% vs 93.0%). Likewise, FR decreased in spring and summer compared to fall and winter (88.5% vs. 90.9%). FR was higher (P<0.01) in non-repeat breeders compared with that of repeat-breeders (90.3% vs 76.2%). Litter size increased (P<0.01) from 10.8 ± 3.2 to 11.1 ± 3.1 pigs when the interval from weaning to estrus was >8 d. The insemination technique did not affect PR and FR but the litter size decreased (P<0.05) from 11.3 ± 3.0 to 11.1 ± 2.9 pigs when PCAI was used compared to CAI. This study reaffirms the negative effects of the hot season on reproductive performance of gilts/sows, although thermal stress at AI did not cause foetal losses. Also, there is no advantage in using the PCAI as compared to the CAI in gilts/sows with high numbers of sperm cells per AI

Vaccination programs, parity, and calving season as factors affecting the risk of fetal losses and mummified fetuses in Holstein cows

Aim of the study: To investigate vaccination programs, parity, and calving season as factors affecting the risk of abortion and mummified fetuses in Holstein cows.Area of study: Hot zone of Northeast Mexico.Material and methods: Multiple logistic regression models were used to examine the relationship between peripartum disorders, parity, previous occurrence of abortion, season of calving, vaccination program, incidence of abortion, and mummified fetuses in Holstein cows.Main results: For 7014 pregnancies (2886 cows), the percentage of cows aborting and having mummified fetuses was 17.7% and 1.1%, respectively. As the number of brucellosis vaccinations increased, the incidence of abortion increased (10.4% for a single vaccination and 38.0% for 6 accumulated vaccinations). Abortion for cows having 1-2 previous abortions (56%) and >2 abortions (77%) was fivefold and sevenfold greater (p<0.01), respectively, than that for cows without previous abortion. Other important risk factors for abortion were number of calvings (19.8% for nulliparous and primiparous vs. 13.8% for >3 parturitions; OR=1.7, p<0.01), leptospirosis vaccine application <55 days postpartum (dpp; OR=1.3, p<0.05), viral vaccine application >37 dpp (OR=1.3, p<0.01), brucellosis vaccine application >20 dpp (OR=1.6, p<0.01), and no application of clostridial vaccine (OR=3.7, p<0.01). Significant risk factors for mummified fetuses were application of ≥3 brucellosis vaccinations (OR=3.3, p<0.01), no application of 10-way clostridial vaccine (OR=2.3, p<0.01), >2 previous abortions (OR=18.4, p<0.01), and calving in autumn (OR=0.4, compared to winter, p<0.05).Research highlights: Risk of abortion and mummified fetuses in Holstein cows has been found to be related to vaccination programs

Use of molecular markers and major genes in the genetic improvement of livestock

Recent developments in molecular biology and statistics have opened the possibility of identifying and using genomic variation and major genes for the genetic improvement of livestock. Information concerning the basis of these techniques and their applications to the genetic improvement of animals is reviewed. Main marker molecular marker systems in animals (RFPL and microsatellites), genome maps, methods for detecting marker major gene linkages and use of marker assisted selection, genetic fingerprinting and mixture models based on segregation analysis are analyzed. The characteristics where the application of marker assisted selection can be more effective are those that are expressed late in the life of the animal, or controlled by a few pairs of genes. The first example correspond to the longevity and carcass characteristics in meat producing animals, the second, to the resistance to certain diseases or defects of simple inheritance. The detection of major genes using mixture models with segregation analysis can direct the work of identification of DNA marker genotypes towards populations and characteristics with greater probability of detecting a major gene using molecular markers. The present trend indicates that molecular, pedigree and phenotypic information will be integrated in the future through mixture models of segregation analysis that might contain major gene effects through the markers, polygenic inheritance and uses powerful and flexible methods of estimation such as Gibbs Sampling

Termorregulación y respuestas reproductivas de carneros bajo estrés por calor. Revisión

The high temperatures recorded during the summer season in hot regions compromise the reproductive capacity of domestic animals. In rams, heat stress (HS) causes in the body a series of physiological, metabolic, endocrine and molecular adjustments in order to maintain normothermia and survive; however, several of these changes are negatively associated with their fertility, mainly endocrine ones. HS in rams causes a decrease in blood testosterone concentrations through different mechanisms, and this is negatively reflected on the process of spermatogenesis and sexual behavior. Consequently, heat-stressed rams exhibit low seminal quality and libido; at the sperm level, structural and DNA damage has been observed. Given this situation, the use of HS mitigation strategies during the summer in sheep farms in hot regions is recommended, such as the use of shades in pens, administration of antioxidants or modifications in the diet. Therefore, the objective of this document is to review the current knowledge regarding the effect of HS on the thermoregulation and reproductive capacity of rams, as well as the application of strategies for its mitigation.Las temperaturas elevadas registradas durante la época de verano en las regiones cálidas comprometen la capacidad reproductiva de los animales domésticos. En carneros, el estrés por calor (EC) causa en el organismo una serie de ajustes fisiológicos, metabólicos, endocrinos y moleculares con el objeto de mantener normotermia y sobrevivir; sin embargo, varios de estos cambios se asocian negativamente con su fertilidad, principalmente los endocrinos. El EC en carneros provoca una disminución en las concentraciones sanguíneas de testosterona a través de diferentes mecanismos, y esto se refleja negativamente en el proceso de espermatogénesis y en la conducta sexual. En consecuencia, los carneros estresados por calor presentan baja calidad seminal y apetito sexual; a nivel de espermatozoides se ha observado daño estructural y en el ADN. Dada esta situación, se recomienda el uso de estrategias de mitigación del EC durante el verano en las explotaciones ovinas de regiones cálidas, tales como el uso de sombras en corrales, la administración de antioxidantes o modificaciones en la alimentación. Por lo tanto, el objetivo de este documento es revisar el conocimiento actual en relación al efecto del EC sobre la capacidad de termorregulación y reproductiva de los carneros, así como la aplicación de estrategias para su mitigación

Seasonal diet composition and forage selectivity of Boer goats in a semi-arid gypsophilous grassland

Botanical and chemical compositions of Boer goat diets, determined with repeated collection of forage samples taken from the goat’s mouth, were studied in a gypsophilous grassland during four seasons of the year. Ten pluriparous goats were used to collect selected forage species. Shrubs were a minor dietary component throughout the year (<7.5%). Goats selected more (p < 0.01) grass during autumn and winter (34.2–37.8%) than during spring (21.2%) and summer (29.0%). During all seasons goat diets were dominated by forbs (>59%). Diets were lowest (p < 0.05) in percentage of crude protein during spring, summer and autumn (13.2 ± 3.5, 13.2 ± 2.4 and 14.2 ± 3.9, respectively) than winter (17.5 ± 2.9) with levels above the recommended quantities for goats throughout the year. In vitro dry matter digestibility of forages selected by goats did not differ between seasons (range 47.4–53.3%). It was concluded that in this particular ecosystem goats preferred forb species over grasses across all seasons. In addition, goats maintained relatively stable diet quality by forage-class mixing of diets. Keywords: dry matter digestibility, food preferences, grazing, nutrient content, tannin

Heat Stress Characterization in a Dairy Cattle Intensive Production Cluster under Arid Land Conditions: An Annual, Seasonal, Daily, and Minute-To-Minute, Big Data Approach

This study characterized the environmental–climatic trends occurring in the largest dairy cattle intensive production cluster under arid land conditions in northern Mexico. The study was based on the Temperature Humidity Index (THI); it aimed to identify the number of days with THI values ≥68 as a bio-marker of heat stress (HS) and evaluate the possible HS effect upon the milk production of dairy cows. Climate data were obtained every 10 min in five farms across years (i.e., 2015–2020). THI was divided into four HS subclasses, 68–71, 72–76, 77–79, and ≥80, according to the circadian HS occurrence (i.e., 1, 4, 8, 12, 16, 20, 24 h), and analyzed across seasons–years. Thus, a total of 1,475,319 THI across different time-scale subclasses was analyzed. The observed results supported our working hypothesis in that yearling-average periods with more than 300 d, HS was confirmed. A yearly average of 31.2 d with THI ≥ 80 with similar (p > 0.05) trends across dairy farms and a slight annual variation (p < 0.05) were also witnessed. Moreover, the highest days with THI levels ≥68 occurred in summer and autumn (p < 0.05), while the in the subclasses 68–71, 72–76, and 77–79, THI occurred in any hour-scale subclass (i.e., 1, 4, 8, and 12 h). Furthermore, a trend to observe THI-HS increases either among years or within an hour-scale basis were also observed. On average, HS engendered a reduction of up to 11.8% in milk production. These research outcomes highlight the need to identify and quantify the negative impacts that HS may generate at a productive and reproductive level in order to delineate mitigation strategies that may lessen the environmental impact upon the dairy cattle industry