Seeing distinct groups where there are none : spurious patterns from between-group PCA

Using sampling experiments, we found that, when there are fewer groups than variables, between-groups PCA (bgPCA) may suggest surprisingly distinct differences among groups for data in which none exist. While apparently not noticed before, the reasons for this problem are easy to understand. A bgPCA captures the g-1 dimensions of variation among the g group means, but only a fraction of the∑ni-g  dimensions of within-group variation ( are the sample sizes), when the number of variables, p, is greater than g-1. This introduces a distortion in the appearance of the bgPCA plots because the within-group variation will be underrepresented, unless the variables are sufficiently correlated so that the total variation can be accounted for with just g-1 dimensions. The effect is most obvious when sample sizes are small relative to the number of variables, because smaller samples spread out less, but the distortion is present even for large samples. Strong covariance among variables largely reduces the magnitude of the problem, because it effectively reduces the dimensionality of the data and thus enables a larger proportion of the within-group variation to be accounted for within the g-1-dimensional space of a bgPCA. The distortion will still be relevant though its strength will vary from case to case depending on the structure of the data (p, g, covariances etc.). These are important problems for a method mainly designed for the analysis of variation among groups when there are very large numbers of variables and relatively small samples. In such cases, users are likely to conclude that the groups they are comparing are much more distinct than they really are.  Having many variables but just small sample sizes is a common problem in fields ranging from morphometrics (as in our examples) to molecular analyses

Hadron detection with a dual-readout fiber calorimeter

In this paper, we describe measurements of the response functions of a fiber-based dual- readout calorimeter for pions, protons and multiparticle "jets" with energies in the range from 10 to 180 GeV. The calorimeter uses lead as absorber material and has a total mass of 1350 kg. It is complemented by leakage counters made of scintillating plastic, with a total mass of 500 kg. The effects of these leakage counters on the calorimeter performance are studied as well. In a separate section, we investigate and compare different methods to measure the energy resolution of a calorimeter. Using only the signals provided by the calorimeter, we demonstrate that our dual-readout calorimeter, calibrated with electrons, is able to reconstruct the energy of proton and pion beam particles to within a few percent at all energies. The fractional widths of the signal distributions for these particles (sigma/E) scale with the beam energy as 30%/sqrt(E), without any additional contributing terms

Dual-readout Calorimetry

The RD52 Project at CERN is a pure instrumentation experiment whose goal is to understand the fundamental limitations to hadronic energy resolution, and other aspects of energy measurement, in high energy calorimeters. We have found that dual-readout calorimetry provides heretofore unprecedented information event-by-event for energy resolution, linearity of response, ease and robustness of calibration, fidelity of data, and particle identification, including energy lost to binding energy in nuclear break-up. We believe that hadronic energy resolutions of {\sigma}/E $\approx$ 1 - 2% are within reach for dual-readout calorimeters, enabling for the first time comparable measurement preci- sions on electrons, photons, muons, and quarks (jets). We briefly describe our current progress and near-term future plans. Complete information on all aspects of our work is available at the RD52 website http://highenergy.phys.ttu.edu/dream/.Comment: 10 pages, 10 figures, Snowmass White pape

Picosecond timing resolution with 3D trench silicon sensors

In the high luminosity LHC phase, the collider will operate at a luminosity of 1.5 × 1034/cm/s and strict requirements will be posed on subdetectors capabilities. Concerning the LHCb Upgrade2 VELO, to guarantee a good detector performance, the additional information of the hit time stamping with an accuracy of at least 50ps is needed. A very promising option today to achieve this level of timing precision is the 3D trench silicon pixel, developed by the INFN TimeSPOT collaboration. This kind of sensor would allow to build a 4D tracker, capable of excellent resolution in both space and time measurements. The latest beam test with the 3D trench sensors has been performed at the CERN SPS/H8 in 2021. By means of low-noise custom electronics boards featuring a two-stage transimpedance amplifier, it was possible to test silicon pixels and strips made with the 3D trench technology. To extrapolate the sensor time resolution, the crossing time of a particle was estimated using two MCP-PMTs as time tag, with an accuracy of approximately 7 ps. The beam-characterization was performed for both non-irradiated and irradi- ated (2.5·1016 1MeV neq/cm2) devices. Preliminary results show that the standard deviation of the core of the pixels time distribution is about 10 ps and the tilted sensor has shown an efficiency close to 100%

Distinct profile of inflammatory and remodelling biomarkers in sputum of severe asthmatic patients with or without persistent airway obstruction

Background: Both inflammatory and remodelling processes are associated with irreversible airway obstruction observed in severe asthma. Our aim was to characterize a group of severe asthmatic patients with or without persistent airway obstruction in relation to specific sputum inflammatory and remodelling biomarkers. Methods: Forty-five patients under regular high-dose inhaled corticosteroid/ß-2agonist treatment were studied, after a follow-up period of at least 2 years, with a minimum of 4 visits. Periostin, TGF-ß, RANTES, IL-8, GM-CSF, FGF-2, and cell counts were measured in induced sputum. Serum periostin was also measured. Results: Sputum induction was successfully performed in all but 5 patients. There were no significant differences in demographic and clinical data between patients with non-persistent obstruction (NO: FEV1/VC>88%pred.) and those with persistent obstruction (O: a not completely reversible obstruction with FEV1/VC<88%pred. at each visit before the study visit). Patients with persistent obstruction had significantly higher sputum periostin and TGF-ß concentrations than NO patients and a trend of higher serum periostin levels. GM-CSF and FGF-2 were significantly increased in NO compared to O patients. No differences between groups were found for RANTES, IL-8 and differential cell counts. Sputum periostin inversely correlated with functional parameters (prebronch. FEV1: rho = −0.36, p < 0.05; postbronch. FEV1: rho = −0.33, p = 0.05). Patients with high sputum periostin concentration (>103.3 pg/ml: median value) showed an absolute number of sputum eosinophils significantly higher than patients with low sputum periostin; this behavior was unobserved when serum periostin was considered. Conclusions: Only periostin and TGF-ß identified a subgroup of severe asthmatic patients with persistent airway obstruction. Sputum periostin was also inversely associated with FEV1 and proved to be a more sensitive biomarker than serum periostin to identify severe asthmatics with higher sputum eosinophilia

A complete simulation of a triple-GEM detector

Since some years the gas electron multipliers (GEM)based detectors have been proposed for many different applications, in particular, in high-energy physics and astrophysics experiments and medical imaging. Many experimental measurements and tests have been performed to investigate their characteristics and performances. To achieve a better understanding of the behavior of this kind of detector the computer simulation is a very important tool. In this paper, a complete and detailed simulation of a triple-GEM-based detector is described. A method has been developed to take into account all the processes from the ionization mechanism up to the signal formation and electronic response. The results obtained are compared with experimental data and a very good agreement is achieved

Aging measurements on triple-GEM detectors operated with CF4-based gas mixtures

We present the results of a global irradiation test of full size triple-GEM detectors operated with CF 4 -based gas mixtures. This study has been performed in the framework of an R&D activity on detectors for the innermost region of the first muon station of the LHCb experiment. The prototypes have been irradiated at the Calliope facility of the ENEA-Casaccia with a high intensity 1.25 MeV γ 60 Co source. After the irradiation test the detectors performances have been measured with X-rays and with a 3 GeV pion beam at CERN. A SEM analysis on several samples of the detectors has been performed to complete the understanding of the physical processes occurring in a GEM detector during a strong irradiation

10 ps timing with highly irradiated 3D trench silicon pixel sensors

In this paper the results of a beam test characterization campaign of 3D trench silicon pixel sensors are presented. A time resolution in the order of 10 ps was measured both for non-irradiated and irradiated sensors up to a fluence of $2.5 \cdot 10^{16}\,1\,MeV\, n_{eq}\,cm^{-2}$. This feature and a detection efficiency close to $99\%$ make this sensors one of the best candidates for 4D tracking detectors in High-Energy-Physics experiments.Comment: Prepared for submission to JINST, IWORID 202