Plant characteristics associated with widespread variation in eelgrass wasting disease

Seagrasses are ecosystem engineers of essential marine habitat. Their populations are rapidly declining worldwide. One potential cause of seagrass population declines is wasting disease, which is caused by opportunistic pathogens in the genus Labyrinthula. While infection with these pathogens is common in seagrasses, theory suggests that disease only occurs when environmental stressors cause immunosuppression of the host. Recent evidence suggests that host factors may also contribute to disease caused by opportunistic pathogens. In order to quantify patterns of disease, identify risk factors, and investigate responses to infection, we surveyed shoot density, shoot length, epiphyte load, production of plant defenses (phenols), and wasting disease prevalence in eelgrass Zostera marina across 11 sites in the central Salish Sea (Washington state, USA), a region where both wasting disease and eelgrass declines have been documented. Wasting disease was diagnosed by the presence of necrotic lesions, and Labyrinthula cells were identified with histology. Disease prevalence among sites varied from 6 to 79%. The probability of a shoot being diseased was higher in longer shoots, in patches of higher shoot density, and in shoots with higher levels of biofouling from epiphytes. Phenolic concentration was higher in diseased leaves. We hypothesize that this results from the induction of phenols during infection. Additional research is needed to evaluate whether phenols are an adaptive defense against Labyrinthula infection. The high site-level variation in disease prevalence emphasizes the potential for wasting disease to be causing some of the observed decline in eelgrass beds

Commissural gain control enhances the midbrain representation of sound location

© 2016 the authors. Accurate localization of sound sources is essential for survival behavior in many species. The inferior colliculi (ICs) are the first point in the auditory pathway where cues used to locate sounds, ie, interaural time differences (ITDs), interaural level differences (ILDs), and pinna spectral cues, are all represented in thesamelocation. These cues are first extracted separatelyoneach side of the midline in brainstem nuclei that project to the ICs. Because of this segregation, each IC predominantly represents stimuli in the contralateral hemifield. We tested the hypothesis that commissural connections between the ICs mediate gain control that enhances sound localization acuity. We recorded IC neurons sensitive to either ITDs or ILDs in anesthetized guinea pig, before, during, and following recovery from deactivation of the contralateral IC by cryoloop cooling or microdialysis of procaine.Duringdeactivation, responseswererescaledbydivisive gain changeandadditive shifts,whichreduced the dynamic range of ITD and ILD response functions and the ability of neurons to signal changes in sound location. These data suggest that each IC exerts multiplicative gain control and subtractive shifts over the other IC that enhances the neural representation of sound location. Furthermore, this gain control operates in a similar manner on both ITD- and ILD-sensitive neurons, suggesting a shared mechanism operates across localization cues. Our findings reveal a novel dependence of sound localization on commissural processing. Significance Statement Sound localization, a fundamental process in hearing, is dependent on bilateral computations in the brainstem. How this information is transmitted from the brainstem to the auditory cortex, through several stages of processing, without loss of signal fidelity, is not clear.Weshow that the ability of neurons in the auditory midbrain to encode azimuthal sound location is dependent on gain control mediated by the commissure of the inferior colliculi. This finding demonstrates that commissural processing between homologous auditory nuclei, on either side of the midline, enhances the precision of sound localization

What do γ\gamma-ray bursts look like?

There have been great and rapid progresses in the field of $\gamma$-ray bursts (denoted as GRBs) since BeppoSAX and other telescopes discovered their afterglows in 1997. Here, we will first give a brief review on the observational facts of GRBs and direct understanding from these facts, which lead to the standard fireball model. The dynamical evolution of the fireball is discussed, especially a generic model is proposed to describe the whole dynamical evolution of GRB remnant from highly radiative to adiabatic, and from ultra-relativistic to non-relativistic phase. Then, Various deviations from the standard model are discussed to give new information about GRBs and their environment. In order to relax the energy crisis, the beaming effects and their possible observational evidences are also discussed in GRB's radiations.Comment: 10 pages, Latex. Invited talk at the Pacific Rim Conference on Stellar Astrophysics, Hong Kong, China, Aug. 199

Lysine supply is a critical factor in achieving sustainable global protein economy

Production of animal-based protein is a significant global source of greenhouse gases, a major driver of agricultural land use and a source of nutrient loss to the environment. In this study, we provide a new assessment of the current sources of proteins in the human diet and analyze the options for increasing the use of plant-based sources, taking the protein quality, as indicated by the amino acid composition, into account. The results demonstrate the importance of sustainable global supply of lysine, one of the amino acids essential for human nutrition. It is demonstrated here that the current production of plant-based lysine that can be considered as replacement of lysine obtained from animal protein largely comes from soybean originating from a small number of countries. There are limited large scale options to broaden the supply of plant-based lysine, namely increase of soya production outsides its current main production areas, increase of production of legumes other than soya, obtaining plant-based lysine from sources not currently used for human consumption, or manufacturing lysine from non-standard plant-based sources (e.g. through fermentation from sugar). All of these options would require major changes in the structure of global agricultural production and associated agri-food systems and would have especially consequences on agricultural land use

Venous cerebral blood flow quantification and cognition in patients with sickle cell anemia

Prior studies have described high venous signal qualitatively using arterial spin labelling (ASL) in patients with sickle cell anemia (SCA), consistent with arteriovenous shunting. We aimed to quantify the effect and explored cross-sectional associations with arterial oxygen content (CaO2), disease-modifying treatments, silent cerebral infarction (SCI), and cognitive performance. 94 patients with SCA and 42 controls underwent cognitive assessment and MRI with single- and multi- inflow time (TI) ASL sequences. Cerebral blood flow (CBF) and bolus arrival time (BAT) were examined across gray and white matter and high-signal regions of the sagittal sinus. Across gray and white matter, increases in CBF and reductions in BAT were observed in association with reduced CaO2 in patients, irrespective of sequence. Across high-signal sagittal sinus regions, CBF was also increased in association with reduced CaO2 using both sequences. However, BAT was increased rather than reduced in patients across these regions, with no association with CaO2. Using the multiTI sequence in patients, increases in CBF across white matter and high-signal sagittal sinus regions were associated with poorer cognitive performance. These novel findings highlight the utility of multiTI ASL in illuminating, and identifying objectively quantifiable and functionally significant markers of, regional hemodynamic stress in patients with SCA

Alkali activation of vitreous calcium aluminosilicate derived from glass fiber waste

The properties and microstructure of alkali-activated (AA) vitreous calcium aluminosilicate (VCAS) are presented in this paper. VCAS is manufactured from a by-product of the glass fiber industry and has been activated using NaOH and KOH solutions. The microstructure and mechanical properties of AA VCAS pastes and mortars are reported. The results show that depending on the type and concentration of hydroxide solution used, mortar samples with compressive strengths up to 77 MPa can be formed after curing for three days at 65 °C. The research demonstrates the potential of VCAS to produce AA cements and the importance of alkali type and concentration in optimizing properties and microstructure.Mitsuuchi Tashima, M.; Soriano Martinez, L.; Borrachero Rosado, MV.; Monzó Balbuena, JM.; Cheeseman, CR.; Paya Bernabeu, JJ. (2012). Alkali activation of vitreous calcium aluminosilicate derived from glass fiber waste. Journal of Sustainable Cement-Based Materials. 1(3):83-93. doi:10.1080/21650373.2012.742610S839313Mahasenan N, Smith S, Humphreys K. The cement industry and global climate change: current and potential future cement industry CO2emissions. Greenhouse Gas Control Technologies – 6th International Conference. Oxford: Pergamon; 2003. p. 995–1000.Schneider, M., Romer, M., Tschudin, M., & Bolio, H. (2011). Sustainable cement production—present and future. Cement and Concrete Research, 41(7), 642-650. doi:10.1016/j.cemconres.2011.03.019WBCSD – World Business Council for Sustainable Development. Cement industry energy and CO2performance – Getting numbers right. Edited by WBCSD, Geneva-Switzerland (ISBN 978-3-940388-48-3). 2009.Shi, C., Jiménez, A. F., & Palomo, A. (2011). New cements for the 21st century: The pursuit of an alternative to Portland cement. Cement and Concrete Research, 41(7), 750-763. doi:10.1016/j.cemconres.2011.03.016Duxson, P., Fernández-Jiménez, A., Provis, J. L., Lukey, G. C., Palomo, A., & van Deventer, J. S. J. (2006). Geopolymer technology: the current state of the art. Journal of Materials Science, 42(9), 2917-2933. doi:10.1007/s10853-006-0637-zFernández-Jiménez, A., Palomo, A., & Criado, M. (2005). Microstructure development of alkali-activated fly ash cement: a descriptive model. Cement and Concrete Research, 35(6), 1204-1209. doi:10.1016/j.cemconres.2004.08.021Hossain, A. B., Shirazi, S. A., Persun, J., & Neithalath, N. (2008). Properties of Concrete Containing Vitreous Calcium Aluminosilicate Pozzolan. Transportation Research Record: Journal of the Transportation Research Board, 2070(1), 32-38. doi:10.3141/2070-05Neithalath, N., Persun, J., & Hossain, A. (2009). Hydration in high-performance cementitious systems containing vitreous calcium aluminosilicate or silica fume. Cement and Concrete Research, 39(6), 473-481. doi:10.1016/j.cemconres.2009.03.006Tashima MM, Soriano L, Borrachero MV, Monzó J, Payá J. Effect of curing time on the microstructure and mechanical strength development of alkali activated nbinders based on vitreous calcium aluminosilicate (VCAS). Bull. Mater. Sci. in press.Hemmings RT, Nelson RD, Graves PL, Cornelius BJ. White pozzolan composition and blended cements containing same. Patent US6776838. 2004.Provis, J. L., Lukey, G. C., & van Deventer, J. S. J. (2005). Do Geopolymers Actually Contain Nanocrystalline Zeolites? A Reexamination of Existing Results. Chemistry of Materials, 17(12), 3075-3085. doi:10.1021/cm050230iCriado, M., Fernández-Jiménez, A., de la Torre, A. G., Aranda, M. A. G., & Palomo, A. (2007). An XRD study of the effect of the SiO2/Na2O ratio on the alkali activation of fly ash. Cement and Concrete Research, 37(5), 671-679. doi:10.1016/j.cemconres.2007.01.013Rees, C. A., Provis, J. L., Lukey, G. C., & van Deventer, J. S. J. (2007). In Situ ATR-FTIR Study of the Early Stages of Fly Ash Geopolymer Gel Formation. Langmuir, 23(17), 9076-9082. doi:10.1021/la701185gLee, W. K. W., & van Deventer, J. S. J. (2003). Use of Infrared Spectroscopy to Study Geopolymerization of Heterogeneous Amorphous Aluminosilicates. Langmuir, 19(21), 8726-8734. doi:10.1021/la026127eGarcía-Lodeiro, I., Fernández-Jiménez, A., Blanco, M. T., & Palomo, A. (2007). FTIR study of the sol–gel synthesis of cementitious gels: C–S–H and N–A–S–H. Journal of Sol-Gel Science and Technology, 45(1), 63-72. doi:10.1007/s10971-007-1643-6Barbosa VFF. Sintese e caracterização de polissialatos (Synthesis and characterization of polysialates) [PhD thesis] (in Portuguese). Instituto Militar de Engenharia. Rio de Janeiro - Brazil. 190 p. 1999.Bernal, S. A., Rodríguez, E. D., Mejía de Gutiérrez, R., Gordillo, M., & Provis, J. L. (2011). Mechanical and thermal characterisation of geopolymers based on silicate-activated metakaolin/slag blends. Journal of Materials Science, 46(16), 5477-5486. doi:10.1007/s10853-011-5490-zBoccaccini, A. R., Bücker, M., Bossert, J., & Marszalek, K. (1997). Glass matrix composites from coal flyash and waste glass. Waste Management, 17(1), 39-45. doi:10.1016/s0956-053x(97)00035-4Kourti, I., Rani, D. A., Deegan, D., Boccaccini, A. R., & Cheeseman, C. R. (2010). Production of geopolymers using glass produced from DC plasma treatment of air pollution control (APC) residues. Journal of Hazardous Materials, 176(1-3), 704-709. doi:10.1016/j.jhazmat.2009.11.089Lampris, C., Lupo, R., & Cheeseman, C. R. (2009). Geopolymerisation of silt generated from construction and demolition waste washing plants. Waste Management, 29(1), 368-373. doi:10.1016/j.wasman.2008.04.007Wu, H.-C., & Sun, P. (2007). New building materials from fly ash-based lightweight inorganic polymer. Construction and Building Materials, 21(1), 211-217. doi:10.1016/j.conbuildmat.2005.06.052Kourti, I., Amutha Rani, D., Boccaccini, A. R., & Cheeseman, C. R. (2011). Geopolymers from DC Plasma–Treated Air Pollution Control Residues, Metakaolin, and Granulated Blast Furnace Slag. Journal of Materials in Civil Engineering, 23(6), 735-740. doi:10.1061/(asce)mt.1943-5533.000017

Volatile organic compound profiling to explore primary graft dysfunction after lung transplantation

Primary graft dysfunction (PGD) is a major determinant of morbidity and mortality following lung transplantation. Delineating basic mechanisms and molecular signatures of PGD remain a fundamental challenge. This pilot study examines if the pulmonary volatile organic compound (VOC) spectrum relate to PGD and postoperative outcomes. The VOC profiles of 58 bronchoalveolar lavage fluid (BALF) and blind bronchial aspirate samples from 35 transplant patients were extracted using solid-phase-microextraction and analyzed with comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry. The support vector machine algorithm was used to identify VOCs that could differentiate patients with severe from lower grade PGD. Using 20 statistically significant VOCs from the sample headspace collected immediately after transplantation (< 6 h), severe PGD was differentiable from low PGD with an AUROC of 0.90 and an accuracy of 0.83 on test set samples. The model was somewhat effective for later time points with an AUROC of 0.80. Three major chemical classes in the model were dominated by alkylated hydrocarbons, linear hydrocarbons, and aldehydes in severe PGD samples. These VOCs may have important clinical and mechanistic implications, therefore large-scale study and potential translation to breath analysis is recommended

The timing of ostomy closure in infants with necrotizing enterocolitis: a systematic review

Item does not contain fulltextPURPOSE: The optimal timing of ostomy closure is a matter of debate. We performed a systematic review of outcomes of early ostomy closure (EC, within 8 weeks) and late ostomy closure (LC, after 8 weeks) in infants with necrotizing enterocolitis. METHODS: PubMed, EMbase, Web-of-Science, and Cinahl were searched for studies that detailed time to ostomy closure, and time to full enteral nutrition (FEN) or complications after ostomy closure. Patients with Hirschsprung's disease or anorectal malformations were excluded. Analysis was performed using SPSS 17 and RevMan 5. RESULTS: Of 778 retrieved articles, 5 met the inclusion criteria. The median score for study quality was 9 [range 8-14 on a scale of 0 to 32 points (Downs and Black, J Epidemiol Community Health 52:377-384, 1998)]. One study described mean time to FEN: 19.1 days after EC (n = 13) versus 7.2 days after LC (n = 24; P = 0.027). Four studies reported complication rates after ostomy closure, complications occurred in 27% of the EC group versus 23% of the LC group. The combined odds ratio (LC vs. EC) was 1.1 [95% CI 0.5, 2.5]. CONCLUSION: Evidence that supports early or late closure is scarce and the published articles are of poor quality. There is no significant difference between EC versus LC in the complication rate. This systematic review supports neither early nor late ostomy closure