Global sensing of gaseous and aerosol trace species using automated instrumentation on 747 airliners

The Global Atmospheric Sampling Program (GASP) by NASA is collecting and analyzing data on gaseous and aerosol trace species in the upper troposphere and lower stratosphere. Measurements are obtained from automated systems installed on four 747 airliners flying global air routes. Advances were made in airborne sampling instrumentation. Improved instruments and analysis techniques are providing an expanding data base for trace species including ozone, carbon monoxide, water vapor, condensation nuclei and mass concentrations of sulfates and nitrates. Simultaneous measurements of several trace species obtained frequently can be used to uniquely identify the source of the air mass as being typically tropospheric or stratospheric. A quantitative understanding of the tropospheric-stratospheric exchange processes leads to better knowledge of the atmospheric impact of pollution through the development of improved simulation models of the atmosphere

Nonlinear dynamic intertwining of rods with self-contact

Twisted marine cables on the sea floor can form highly contorted three-dimensional loops that resemble tangles. Such tangles or hockles are topologically equivalent to the plectomenes that form in supercoiled DNA molecules. The dynamic evolution of these intertwined loops is studied herein using a computational rod model that explicitly accounts for dynamic self-contact. Numerical solutions are presented for an illustrative example of a long rod subjected to increasing twist at one end. The solutions reveal the dynamic evolution of the rod from an initially straight state, through a buckled state in the approximate form of a helix, through the dynamic collapse of this helix into a near-planar loop with one site of self-contact, and the subsequent intertwining of this loop with multiple sites of self-contact. This evolution is controlled by the dynamic conversion of torsional strain energy to bending strain energy or, alternatively by the dynamic conversion of twist (Tw) to writhe (Wr). KEY WORDS Rod Dynamics, Self-contact, Intertwining, DNA Supercoiling, Cable HocklingComment: 35 pages, 9 figures, submitted to Proceedings of the Royal Society A: Mathematical, Physical and Engineering Science

UK open source crime data: accuracy and possibilities for research

In the United Kingdom, since 2011 data regarding individual police recorded crimes have been made openly available to the public via the police.uk website. To protect the location privacy of victims these data are obfuscated using geomasking techniques to reduce their spatial accuracy. This paper examines the spatial accuracy of the police.uk data to determine at what level(s) of spatial resolution – if any – it is suitable for analysis in the context of theory testing and falsification, evaluation research, or crime analysis. Police.uk data are compared to police recorded data for one large metropolitan Police Force and spatial accuracy is quantified for four different levels of geography across five crime types. Hypotheses regarding systematic errors are tested using appropriate statistical approaches, including methods of maximum likelihood. Finally, a “best-fit” statistical model is presented to explain the error as well as to develop a model that can correct it. The implications of the findings for researchers using the police.uk data for spatial analysis are discussed

The design of a research water table

A complete design for a research water table is presented. Following a brief discussion of the analogy between water and compressible-gas flows (hydraulic analogy), the components of the water table and their function are described. The major design considerations are discussed, and the final design is presented

Magnetic excitations in vanadium spinels

We study magnetic excitations in vanadium spinel oxides AV$_2$O$_4$ (A=Zn, Mg, Cd) using two models: first one is a superexchange model for vanadium S=1 spins, second one includes in addition spin-orbit coupling, and crystal anisotropy. We show that the experimentally observed magnetic ordering can be obtained in both models, however the orbital ordering is different with and without spin-orbit coupling and crystal anisotropy. We demonstrate that this difference strongly affects the spin-wave excitation spectrum above the magnetically ordered state, and argue that the neutron measurement of such dispersion is a way to distinguish between the two possible orbital orderings in AV$_2$O$_4$.Comment: accepted in Phys. Rev.

Complete genome sequence of BK polyomavirus subtype Ib-1 detected in a kidney transplant patient with BK viremia using shotgun sequencing

We report here the complete genome sequence of polyomavirus BK subtype Ib-1, isolate AR11, identified in urine from a human kidney transplant recipient with a clinical diagnosis of BK viremia. The AR11 isolate is closely related to reference strain human polyomavirus 1 isolate J2B-2 with 99% identity

Parasites in a biodiversity hotspot: A survey of hematozoa and a molecular phylogenetic analysis of plasmodium in New Guinea skinks

A sample of 204 skinks (Squamata: Scincidae) from 10 genera representing 24 species were collected from 10 different localities in New Guinea and examined for blood parasites. Hemogregarines, trypanosomes, microfilarial worms, and 8 infections showing 2 distinct morphological types of malaria parasites (Plasmodium sp.) were observed. Molecular sequence data, in the form of mitochondrial cytochrome b sequences from the Plasmodium infections, showed 2 distinct clades of parasites, 1 in Sphenomorphus jobiense hosts and 1 in Emoia spp., which correspond to the 2 morphotypes. There was substantial genetic variation between the 2 clades, as well as within the clade of Emoia parasites. Nearly half of the skinks sampled had green blood pigmentation, resulting from the presence of biliverdin in the plasma; however, only 1 of these lizards was infected with Plasmodium sp. and only 2 had any blood parasites. These preliminary results suggest a high degree of phylogenetic diversity but a very low prevalence of Plasmodium spp. infections in the skinks of this globally important biodiversity hot spot. © American Society of Parasitologists 2006

Concepts in Animal Parasitology, Chapter 10: Haemosporida (Order): The “Malaria Parasites”

Chapter 10 in Concepts in Animal Parasitology on the order Haemosporida, the “malaria parasites,” by Susan L. Perkins and Spencer C. Galen. 2024. S. L. Gardner and S. A. Gardner, editors. Zea Books, Lincoln, Nebraska, United States. doi: 10.32873/unl.dc.ciap01

Icing flight research: Aerodynamic effects of ice and ice shape documentation with stereo photography

Aircraft icing flight research was performed in natural icing conditions. A data base consisting of icing cloud measurements, ice shapes, and aerodynamic measurements is being developed. During research icing encounters the icing cloud was continuously measured. After the encounter, the ice accretion shapes on the wing were documented with a stereo camera system. The increase in wing section drag was measured with a wake survey probe. The overall aircraft performance loss in terms of lift and drag coefficient changes was obtained by steady level speed/power measurements. Selective deicing of the airframe components was performed to determine their contributions to the total drag increase. Engine out capability in terms of power available was analyzed for the iced aircraft. It was shown that the stereo photography system can be used to document ice shapes in flight and that the wake survey probe can measure increases in wing section drag caused by ice. On one flight, the wing section drag coefficient (c sub d) increased approximately 120 percent over the uniced baseline at an aircraft angle of attack of 6 deg. On another flight, the aircraft darg coefficient (c sub d) increased by 75 percent over the uniced baseline at an aircraft lift coefficient (C sub d) of 0.5